EWM26785.1, cds3868 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM26785.1
Unique Name	cds3868
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002462.1:302827..302912 -
Alignment location	CM002462.1:299488..302422 -

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM26785.1
Product	peripheral membrane protein
Orig transcript id	gnl\|cribi\|Naga_100018g28.2765.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002462.1	supercontig	CM002462.1:302827..302912 -
CM002462.1	supercontig	CM002462.1:299488..302422 -

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Biological Process**
Term	Definition
GO:0016043	cellular component organization
GO:0009056	catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR019460	Autophagy-rel_p11

Homology

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|585108876|gb|EWM26785.1| (peripheral membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 2032.68 bits (5265), Expect = 0.000e+0
Identity = 1006/1006 (100.00%), Postives = 1006/1006 (100.00%), Query Frame = 0

Query:    1 MPRAVLPIKVAETGVVVNIELHNPYQDDSVIDLKHLLASATQVAPEDQILLIGPPFKPLKRLDPPLTFSSSSATDEEVAATQSELSQAQPLSSSSSSLSTSSPSSSASFSSSASPPARSIYLYDRRTLDAPSTPSSALPAPSPHLPVSLPDIPSSPSTPASPRLQSLIHQAVGQGLLSQTLSKYERLVGGNVAKGHAYQDRAQRLVEAAVRAQEEVRIQRDAGQVALTNLRDHFRAISRDADKLSRRHEKQAEKHRKLLENFNPNLRVLEQRPLHPALGTALRDSVREERREGGREGGREGGGGTWSSSSATGSVTELSVSPLEGGSSSSRVSPSPPGVECEALRKACSASSSSITLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQEEVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQSLNLHHRAPPGRKKSGDAGVGGDGEGAGARLQRVEEENSLLRSCMETVLNVMEEMRQCAASTGGSGSGCEAEREQAVTRAREGGREAGKGAGSPSPSSSPQHLVNAVDDTASFVKARLRDLQAELQASRGEGKERGKEGVVPCTNMSPSTPSLSISPAPSSPGSHAKISFREFNVGDVALFLPTSHQGENRVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSNEVV 1006
            MPRAVLPIKVAETGVVVNIELHNPYQDDSVIDLKHLLASATQVAPEDQILLIGPPFKPLKRLDPPLTFSSSSATDEEVAATQSELSQAQPLSSSSSSLSTSSPSSSASFSSSASPPARSIYLYDRRTLDAPSTPSSALPAPSPHLPVSLPDIPSSPSTPASPRLQSLIHQAVGQGLLSQTLSKYERLVGGNVAKGHAYQDRAQRLVEAAVRAQEEVRIQRDAGQVALTNLRDHFRAISRDADKLSRRHEKQAEKHRKLLENFNPNLRVLEQRPLHPALGTALRDSVREERREGGREGGREGGGGTWSSSSATGSVTELSVSPLEGGSSSSRVSPSPPGVECEALRKACSASSSSITLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQEEVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQSLNLHHRAPPGRKKSGDAGVGGDGEGAGARLQRVEEENSLLRSCMETVLNVMEEMRQCAASTGGSGSGCEAEREQAVTRAREGGREAGKGAGSPSPSSSPQHLVNAVDDTASFVKARLRDLQAELQASRGEGKERGKEGVVPCTNMSPSTPSLSISPAPSSPGSHAKISFREFNVGDVALFLPTSHQGENRVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSNEVV
Sbjct:    1 MPRAVLPIKVAETGVVVNIELHNPYQDDSVIDLKHLLASATQVAPEDQILLIGPPFKPLKRLDPPLTFSSSSATDEEVAATQSELSQAQPLSSSSSSLSTSSPSSSASFSSSASPPARSIYLYDRRTLDAPSTPSSALPAPSPHLPVSLPDIPSSPSTPASPRLQSLIHQAVGQGLLSQTLSKYERLVGGNVAKGHAYQDRAQRLVEAAVRAQEEVRIQRDAGQVALTNLRDHFRAISRDADKLSRRHEKQAEKHRKLLENFNPNLRVLEQRPLHPALGTALRDSVREERREGGREGGREGGGGTWSSSSATGSVTELSVSPLEGGSSSSRVSPSPPGVECEALRKACSASSSSITLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQEEVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQSLNLHHRAPPGRKKSGDAGVGGDGEGAGARLQRVEEENSLLRSCMETVLNVMEEMRQCAASTGGSGSGCEAEREQAVTRAREGGREAGKGAGSPSPSSSPQHLVNAVDDTASFVKARLRDLQAELQASRGEGKERGKEGVVPCTNMSPSTPSLSISPAPSSPGSHAKISFREFNVGDVALFLPTSHQGENRVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSNEVV 1006

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|566025134|gb|ETI48045.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 127.872 bits (320), Expect = 2.677e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.923 bits (276), Expect = 4.833e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  804 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 897

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|566025167|gb|ETI48078.1| (hypothetical protein F443_07838, partial [Phytophthora parasitica P1569])

HSP 1 Score: 127.487 bits (319), Expect = 2.881e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  163 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQG------------SSSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 514

HSP 2 Score: 110.923 bits (276), Expect = 4.289e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  702 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 795

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|567962443|gb|ETK87968.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567991161|gb|ETL41375.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570952545|gb|ETP17802.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 127.487 bits (319), Expect = 2.995e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.538 bits (275), Expect = 6.471e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  804 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 897

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|675191351|ref|XP_008904560.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568095355|gb|ETN10123.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570328804|gb|ETO76752.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 127.487 bits (319), Expect = 3.127e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.538 bits (275), Expect = 6.146e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  804 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 897

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|568050852|gb|ETM47780.1| (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 127.487 bits (319), Expect = 3.133e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  252 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 603

HSP 2 Score: 110.538 bits (275), Expect = 6.154e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  805 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 898

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|566025133|gb|ETI48044.1| (hypothetical protein F443_07841 [Phytophthora parasitica P1569])

HSP 1 Score: 127.487 bits (319), Expect = 3.724e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.153 bits (274), Expect = 7.698e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  843 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 936

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|568020420|gb|ETL94549.1| (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 127.102 bits (318), Expect = 3.880e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EICKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.538 bits (275), Expect = 5.990e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  804 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 897

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|570986973|gb|ETP45872.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 127.102 bits (318), Expect = 4.122e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  251 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQGS------------SSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 602

HSP 2 Score: 110.538 bits (275), Expect = 6.755e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  804 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 897

[Close]

BLAST of EWM26785.1 vs. NCBI_GenBank
Match: gi|570986975|gb|ETP45874.1| (hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 126.716 bits (317), Expect = 4.703e-26
Identity = 104/395 (26.33%), Postives = 190/395 (48.10%), Query Frame = 0

Query:  356 TLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEAPSALRVTADMGTAAQE---EVDEITRRLSEQETAVALLEGGHAEMLERIETSLGGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMVGRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERRHFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEEIQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIAELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAGKDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQ--SLNLHH 745
            TLYD +PV +  EW  +C ++   +   +  +Q  + D +   E    L   A+     +E   E++E+    S+Q      L G    +L  IE +    A+G + + +S+ +     +D C+ +D L   Q  ++       E +V  +  + A+K +T   +   L +IS  Q  I+    +L++  +A+ A+++HFY LEHL+ LP +Y A L E++RR  Y R+F  +++S  + +A+ RE+E+Q R +FLR    HL   F    +G+ ++P H + +    +  LP       L+ DEGE+E    +++E             R   EE  D E++G              +EST  ++ L+ERC   +  +++L  +++    NL++
Sbjct:  117 TLYDCIPVEKEREWAAQCEQSHTHVRGQVLKLQ-QVHD-EVCKEVTDMLAAHAEASREYEEASTELEEMKALGSKQMNITNTLRGNLQYVLSSIEET-STIASGSNPMQASTNA-----LDVCRRIDELYQGQQNMVPDAQKLVEDIVAHVDKIAAKKSKTFERVHSTLRQISISQSKIRDFENSLAVFREALAAQKKHFYELEHLDKLPESYAACLKEISRRLKYGRMFSDRIQSMAEELAQLREDEVQHREEFLRSFGQHLPRDF---VSGLAEKPSHCEFRMRPFDQSLP-------LIEDEGEQEFASYEDKE-------------RPPSEEFVDCEDQG------------SSSESTNNVDLLQERCKELEARVSELTAELEQSKKNLYY 468

HSP 2 Score: 110.538 bits (275), Expect = 4.870e-21
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:  906 KISFREFNVGDVALFLPTSHQGEN--RVYLAFHTNCPHRYLSHESLESLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLHVSN 1003
            KISFR F+V D+ALFLPTS  G +  RVYLAFH  CPHR+LS ES+ S       G R+PD+++G+IV ++E  A EG   +NPY L  G  FYVL V++
Sbjct:  670 KISFRSFSVNDLALFLPTSAPGSDAQRVYLAFHLGCPHRFLSEESISSFSN---DGQRYPDYVVGRIVLIDEQTATEG---NNPYALHLGTTFYVLTVAS 763

The following BLAST results are available for this feature:

BLAST of EWM26785.1 vs. NCBI_GenBank

BLAST of EWM26785.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585108876\|gb\|EWM26785.1\|	0.000e+0	100.00	peripheral membrane protein [Nannochloropsis gadit...	[more]
gi\|566025134\|gb\|ETI48045.1\|	2.677e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|566025167\|gb\|ETI48078.1\|	2.881e-26	26.33	hypothetical protein F443_07838, partial [Phytopht...	[more]
gi\|567962443\|gb\|ETK87968.1\|	2.995e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|675191351\|ref\|XP_008904560.1\|	3.127e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|568050852\|gb\|ETM47780.1\|	3.133e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|566025133\|gb\|ETI48044.1\|	3.724e-26	26.33	hypothetical protein F443_07841 [Phytophthora para...	[more]
gi\|568020420\|gb\|ETL94549.1\|	3.880e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|570986973\|gb\|ETP45872.1\|	4.122e-26	26.33	hypothetical protein, variant 1 [Phytophthora para...	[more]
gi\|570986975\|gb\|ETP45874.1\|	4.703e-26	26.33	hypothetical protein, variant 3 [Phytophthora para...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna3877	rna3877	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications