EWM30227.1, cds386 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|585112886|gb|EWM30227.1| (hypothetical protein Naga_100003g100 [Nannochloropsis gaditana]) HSP 1 Score: 1843.55 bits (4774), Expect = 0.000e+0 Identity = 919/919 (100.00%), Postives = 919/919 (100.00%), Query Frame = 0
Query: 1 MLLVRVKAESSVSDFDADSARRSPPFVAEPGLSLRINCAKAADKFGDALAQHTESLKSTNSASFVIDAEGIILSRQVPMMEMPTNRSGPGTDSGEKCPNPPTVGALVTTTLSPKSESPKRVAVPTLGAPVAAPPASAVAVAARGHGSSLQNGLPARNGDGGSSLTPTSGPREFLQVASKPPGTEMPALDASTSGLIHKPASSDAATALSQHHDALIQRELNAIIGQKREHRDRSEESTVLLPSTSPISVPVPRHQSSARPGPGPASHALPASPPAQAGSNARGSGQTVSNRSPPSANAQALMPPTRHSTRGATAAAAAGISKSIEEACHAAALEDGVLSSKGGGALNAGYGNAKQGSVVSPGETSALTSANKAGKVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQAANEGEPASASTTPRSNCSSGINSGFRGAAGPNSTKGTSRHHQNIAPEHTGATLHHISHLHQPSGLRRGPGGSDTGILSVTAATNMPRTDSQDSLSVLGRTISADALGHLTDFPHTTSLGDLAGLNMFTSSPFPSTDNLLSLHQHQHQQTVAAAPRGHTTLSAHNATSVAAAAAAAAVAPSSTSISRNTGDSAPRGPNVSGHGSQLPMSTTRGTVATVTQNPVITATARNAGGANTAGSVSSTTTTQKRIPRVDSATGLSSLRVMSGLPRNTSVEDFLSLVDYGDIPAPDKDLLSKCVFPQNSAARAAQTAASQQAAVAFTGIGKPSVILAGGVKVEGGAPTGPIPGDSHDVAGGKRDRGDTLPTISTGSSAMGARLKQPKIER 919
MLLVRVKAESSVSDFDADSARRSPPFVAEPGLSLRINCAKAADKFGDALAQHTESLKSTNSASFVIDAEGIILSRQVPMMEMPTNRSGPGTDSGEKCPNPPTVGALVTTTLSPKSESPKRVAVPTLGAPVAAPPASAVAVAARGHGSSLQNGLPARNGDGGSSLTPTSGPREFLQVASKPPGTEMPALDASTSGLIHKPASSDAATALSQHHDALIQRELNAIIGQKREHRDRSEESTVLLPSTSPISVPVPRHQSSARPGPGPASHALPASPPAQAGSNARGSGQTVSNRSPPSANAQALMPPTRHSTRGATAAAAAGISKSIEEACHAAALEDGVLSSKGGGALNAGYGNAKQGSVVSPGETSALTSANKAGKVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQAANEGEPASASTTPRSNCSSGINSGFRGAAGPNSTKGTSRHHQNIAPEHTGATLHHISHLHQPSGLRRGPGGSDTGILSVTAATNMPRTDSQDSLSVLGRTISADALGHLTDFPHTTSLGDLAGLNMFTSSPFPSTDNLLSLHQHQHQQTVAAAPRGHTTLSAHNATSVAAAAAAAAVAPSSTSISRNTGDSAPRGPNVSGHGSQLPMSTTRGTVATVTQNPVITATARNAGGANTAGSVSSTTTTQKRIPRVDSATGLSSLRVMSGLPRNTSVEDFLSLVDYGDIPAPDKDLLSKCVFPQNSAARAAQTAASQQAAVAFTGIGKPSVILAGGVKVEGGAPTGPIPGDSHDVAGGKRDRGDTLPTISTGSSAMGARLKQPKIER
Sbjct: 1 MLLVRVKAESSVSDFDADSARRSPPFVAEPGLSLRINCAKAADKFGDALAQHTESLKSTNSASFVIDAEGIILSRQVPMMEMPTNRSGPGTDSGEKCPNPPTVGALVTTTLSPKSESPKRVAVPTLGAPVAAPPASAVAVAARGHGSSLQNGLPARNGDGGSSLTPTSGPREFLQVASKPPGTEMPALDASTSGLIHKPASSDAATALSQHHDALIQRELNAIIGQKREHRDRSEESTVLLPSTSPISVPVPRHQSSARPGPGPASHALPASPPAQAGSNARGSGQTVSNRSPPSANAQALMPPTRHSTRGATAAAAAGISKSIEEACHAAALEDGVLSSKGGGALNAGYGNAKQGSVVSPGETSALTSANKAGKVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQAANEGEPASASTTPRSNCSSGINSGFRGAAGPNSTKGTSRHHQNIAPEHTGATLHHISHLHQPSGLRRGPGGSDTGILSVTAATNMPRTDSQDSLSVLGRTISADALGHLTDFPHTTSLGDLAGLNMFTSSPFPSTDNLLSLHQHQHQQTVAAAPRGHTTLSAHNATSVAAAAAAAAVAPSSTSISRNTGDSAPRGPNVSGHGSQLPMSTTRGTVATVTQNPVITATARNAGGANTAGSVSSTTTTQKRIPRVDSATGLSSLRVMSGLPRNTSVEDFLSLVDYGDIPAPDKDLLSKCVFPQNSAARAAQTAASQQAAVAFTGIGKPSVILAGGVKVEGGAPTGPIPGDSHDVAGGKRDRGDTLPTISTGSSAMGARLKQPKIER 919
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|299116677|emb|CBN74822.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 211.075 bits (536), Expect = 4.932e-53 Identity = 114/182 (62.64%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 375 KVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKN-SVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQAAN-EGEPASASTTPRSNCS 554
K NGLRRGKWT EEE YANRLI EFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR QAD+DRL +IERSR +LA+LERRFLERVA TNRCK GSK G S+ + P P P PWMLPP+ A G + A+ T R+N +
Sbjct: 258 KKPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-QADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIGSKEG-GSSFDLLRPNQP---------------PPATQPWMLPPSPPAVTLAGTLSPAAATQRANVA 422
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|219114337|ref|XP_002176339.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402585|gb|EEC42575.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 204.912 bits (520), Expect = 1.851e-52 Identity = 93/110 (84.55%), Postives = 102/110 (92.73%), Query Frame = 0
Query: 380 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAG 489
LRRGKWTPEEEAYANRLI+EFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR ADL+RL+ ++I++SR EL+ELERRFLERVAQTNR K+S G
Sbjct: 55 LRRGKWTPEEEAYANRLILEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-TADLNRLTPEQIQQSRAELSELERRFLERVAQTNRVKSSGVG 163
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|1210524275|dbj|GAX17004.1| (hypothetical protein FisN_5Hh386 [Fistulifera solaris]) HSP 1 Score: 199.134 bits (505), Expect = 2.480e-50 Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0
Query: 380 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNS 486
LRRGKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR ADL+RL+ ++I++SR EL+ELERRFLERVAQTNR K+S
Sbjct: 76 LRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSELERRFLERVAQTNRVKSS 181
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|1210515777|dbj|GAX25300.1| (hypothetical protein FisN_5Lh386 [Fistulifera solaris]) HSP 1 Score: 198.749 bits (504), Expect = 4.321e-50 Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0
Query: 380 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNS 486
LRRGKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR ADL+RL+ ++I++SR EL+ELERRFLERVAQTNR K+S
Sbjct: 75 LRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSELERRFLERVAQTNRVKSS 180
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|1072233541|gb|OEU18271.1| (hypothetical protein FRACYDRAFT_260330 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 200.29 bits (508), Expect = 1.908e-49 Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 380 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCK 484
LRRGKWTPEEEAYANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR ADL+RL+ ++I++SR EL++LERRFLERVAQTNR K
Sbjct: 47 LRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-TADLNRLTPEQIQKSRAELSDLERRFLERVAQTNRVK 150
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|676383901|ref|XP_009035229.1| (hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens] >gi|323454561|gb|EGB10431.1| hypothetical protein AURANDRAFT_62630 [Aureococcus anophagefferens]) HSP 1 Score: 200.675 bits (509), Expect = 2.308e-49 Identity = 104/160 (65.00%), Postives = 116/160 (72.50%), Query Frame = 0
Query: 377 KNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPAAQA 536
+NGLRRGKWT EEEAYANRLI EFK GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR QAD+DRL+ D+I+RSR ELAELERRFL RVAQ++R S G G+ + Q+ P+L PW+LPP A A
Sbjct: 588 ENGLRRGKWTVEEEAYANRLIHEFKLGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-QADMDRLTPDDIKRSRYELAELERRFLTRVAQSHRSAKSGGAGAKGVKGGDGKALGGGLMQAQQ----------RPMLAPWLLPPHAAA 736
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|299117483|emb|CBN73986.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 176.792 bits (447), Expect = 2.269e-45 Identity = 82/104 (78.85%), Postives = 91/104 (87.50%), Query Frame = 0
Query: 379 GLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDR--LSTDEIERSRQELAELERRFLERVAQT 480
GLRRGKWTPEEE YANRLI EFK+GLLPLTDGTTLRTFLS +LNCDPMRISKKFVG NCIGKQVFRR+Q D D LS + +++SR ELAELER+FLERVA+T
Sbjct: 115 GLRRGKWTPEEEKYANRLIQEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFVGSNCIGKQVFRRQQGVDEDSSPLSEEAMDKSRAELAELERKFLERVAET 218
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|223994807|ref|XP_002287087.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978402|gb|EED96728.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 177.948 bits (450), Expect = 5.246e-43 Identity = 78/103 (75.73%), Postives = 92/103 (89.32%), Query Frame = 0
Query: 380 LRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNR 482
LRRGKWT EEEAYA+RLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRR AD++ L+ +I+++R EL+ELE+RFL+RV+Q +
Sbjct: 116 LRRGKWTAEEEAYASRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR-GADVNNLTPAQIQQTRLELSELEKRFLDRVSQNKK 217
BLAST of EWM30227.1 vs. NCBI_GenBank
Match: gi|397627741|gb|EJK68601.1| (hypothetical protein THAOC_10204 [Thalassiosira oceanica]) HSP 1 Score: 152.14 bits (383), Expect = 1.236e-37 Identity = 73/108 (67.59%), Postives = 86/108 (79.63%), Query Frame = 0
Query: 361 PGETSALTSANKAGKVKNGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAE 468
P + S++++ K G+ LRRGKWT EEEAYA RLI EFKSGLLPLTDGTTLR FLSKLLNCDPMRISKKFVG NCIGKQVFRR+ AD++ L+ +I + R EL+E
Sbjct: 160 PPDASSISTKKKGGQ---PLRRGKWTTEEEAYAARLIHEFKSGLLPLTDGTTLRNFLSKLLNCDPMRISKKFVGNNCIGKQVFRRK-VADINSLTPAQISQIRVELSE 263 The following BLAST results are available for this feature:
BLAST of EWM30227.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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