EWM26811.1, cds3853 (CDS) Nannochloropsis gaditana

Overview
NameEWM26811.1
Unique Namecds3853
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:270723..270741 -
Alignment locationCM002462.1:270444..270652 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26811.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100018g44.2791.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:270723..270741 -
CM002462.1supercontigCM002462.1:270444..270652 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26811.1 vs. NCBI_GenBank
Match: gi|585108902|gb|EWM26811.1| (hypothetical protein Naga_100018g44 [Nannochloropsis gaditana])

HSP 1 Score: 160.614 bits (405), Expect = 3.375e-50
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MVTQGRDLNWKYPLTDLHIFRCCMSVFQSAISCHSSSPLFVAYISDSQGISRLAVVLLYKKAGQHTFRNEERYGN 75
            MVTQGRDLNWKYPLTDLHIFRCCMSVFQSAISCHSSSPLFVAYISDSQGISRLAVVLLYKKAGQHTFRNEERYGN
Sbjct:    1 MVTQGRDLNWKYPLTDLHIFRCCMSVFQSAISCHSSSPLFVAYISDSQGISRLAVVLLYKKAGQHTFRNEERYGN 75
The following BLAST results are available for this feature:
BLAST of EWM26811.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108902|gb|EWM26811.1|3.375e-50100.00hypothetical protein Naga_100018g44 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3862rna3862Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications