EWM26814.1, cds3843 (CDS) Nannochloropsis gaditana

Overview
NameEWM26814.1
Unique Namecds3843
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:226076..226287 -
Alignment locationCM002462.1:225449..225847 -
Alignment locationCM002462.1:224681..225272 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26814.1
Productglutamyl endopeptidase family protein
Orig transcript idgnl|cribi|Naga_100018g57.2794.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:226076..226287 -
CM002462.1supercontigCM002462.1:225449..225847 -
CM002462.1supercontigCM002462.1:224681..225272 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR009003Trypsin-like_Pept_dom
IPR018114Peptidase_S1_AS
IPR001254Peptidase_S1
IPR001314Peptidase_S1A
Homology
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|585108905|gb|EWM26814.1| (glutamyl endopeptidase family protein [Nannochloropsis gaditana])

HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query:    1 MKYRGNNSFEGFLFFLAVNWALLSVLVLGTQTGPSGGWGARFQSVGCEINPHSKYNKMSSSSGSLREKSRMFNVSVDQGNYISLRAFLGTLPIGGKLQDLVRDEDDADLPSVEKFLEGLTLKSLKENLGKGLRGGTDRVAAAVDVGVEGEQQSIDTRDVHQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGGALLDASFNVVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQFMPTYAHILTQID 400
            MKYRGNNSFEGFLFFLAVNWALLSVLVLGTQTGPSGGWGARFQSVGCEINPHSKYNKMSSSSGSLREKSRMFNVSVDQGNYISLRAFLGTLPIGGKLQDLVRDEDDADLPSVEKFLEGLTLKSLKENLGKGLRGGTDRVAAAVDVGVEGEQQSIDTRDVHQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGGALLDASFNVVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQFMPTYAHILTQID
Sbjct:    1 MKYRGNNSFEGFLFFLAVNWALLSVLVLGTQTGPSGGWGARFQSVGCEINPHSKYNKMSSSSGSLREKSRMFNVSVDQGNYISLRAFLGTLPIGGKLQDLVRDEDDADLPSVEKFLEGLTLKSLKENLGKGLRGGTDRVAAAVDVGVEGEQQSIDTRDVHQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGGALLDASFNVVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQFMPTYAHILTQID 400          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|585103102|gb|EWM22557.1| (peptidase s1 and s6 chymotrypsin hap [Nannochloropsis gaditana])

HSP 1 Score: 129.798 bits (325), Expect = 3.424e-30
Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 0
Query:  162 RRLNVYA-KDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQGVYFHNCDCA--AGASGGALLDASFNVVGINTAHV----MPSNTKLLRASDYNPTYPNIAVPAYQFMPTYAHILTQ 398
            RRLNV+   D+R   D D +P R  GKL FP   YCT  L+G   +LTA HCF +    +    +   +F + Y           AS+    +WYG     +   SDWAI  ++ PLG T G++      ++  LP+  +FS++ +S D +   AG DP CSL    +        C+  AGASG A+ D    + G+  A +    MP   K+L   D++P +PN A PA +  PT++ ++TQ
Sbjct:   92 RRLNVFGWPDRRHISDRDTWPGRVVGKLEFPDRQYCTATLVGPSLILTARHCFANLLDEMVASRM-DGRFLLGYSGGT-----VLASAGLLHVWYG-----LDPTSDWAIARIDQPLGRTFGHMVPTSAAVTDMLPLEKQFSMVAFSRDKFEYRAGTDPVCSLLSFRKQARLMVTTCSGEAGASGAAIADDKGVIYGVFVAAIEHDDMP-QVKVL--GDFDPRFPNFATPAEEVYPTWSWLITQ 321          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1082586300|gb|OFZ17242.1| (hypothetical protein A2X86_01975 [Bdellovibrionales bacterium GWA2_49_15])

HSP 1 Score: 94.3597 bits (233), Expect = 2.036e-18
Identity = 73/208 (35.10%), Postives = 94/208 (45.19%), Query Frame = 0
Query:  166 VYAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYN----KFSLIGYSEDGYS-QTAGIDPKCSLE-----DAYQGVYFHNCDCAAGASGGALL---DASFNVVGINTAH 360
            +  KD R       YP    G L    +  CT  L+G R +LTAAHC     T     +I +  F   Y     GK  + A     R W GT   +  R SDWA+ ELE PLG+  G+V +    +S      N    K +L GYS D  S QTAG+D  C L      D  + V  H+CD   GASGG +L   ++   VV +N A 
Sbjct:   22 ILGKDNRQPMTSTQYPWTAIGLLAIGNTGVCTATLVGPRLILTAAHCLVDARTKRLQQDITNVVF---YPNYMGGKARHGAKVV--RSWVGTFDAQNERWSDWAVAELEAPLGKIYGFVPV----VSYTGVFLNFAPSKVTLAGYSTDFLSGQTAGVDVDCQLRAQLKVDDARKVVTHDCDMRPGASGGPILMFVNSRPQVVAVNVAE 220          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1199210981|gb|OUR78597.1| (hypothetical protein A9Q83_06885 [Alphaproteobacteria bacterium 46_93_T64])

HSP 1 Score: 85.1149 bits (209), Expect = 4.067e-15
Identity = 76/250 (30.40%), Postives = 113/250 (45.20%), Query Frame = 0
Query:  160 HQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTS-IDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYP--------EVYRNSDWAIIELETPLGETQGYVGI---NPTDLSRQLPMYNKFSLIGYSEDGYSQTAGIDPKCSLEDAYQ------GVYFHNCDCAAGASGG---ALLDASFNVVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQF 388
            H+R   +   D R   D   YP R  G++    S+ CTG L+ +  VLTAAHCF++  TS       +H  F V Y   ++G++   A +A G + Y T +         ++ R  DWAI++L+ PLG+  G + I   N      Q    N     GYS D Y+    +   C L D  +       VYFH CD   G SG    AL D  + ++ I++A    +  +++           IAVP+ QF
Sbjct:   35 HKRPSGIKGVDDRIRVDITQYPWRAIGRINRSGSF-CTGVLVSETEVLTAAHCFWNKRTSRWSQARFFH--FVVGY---EKGQY---AGTARG-ISYRTAFKTLPNLKNIKLEREDDWAILKLDKPLGKKFGIIEIAAGNGKAYLSQNSQKNTIYQAGYSRD-YAHVLTVHKDCRLTDYVKLKEKSPPVYFHQCDATRGDSGSPIFALSDKKYRLIAIHSATARKTTGEVI----------GIAVPSEQF 263          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1105268943|ref|WP_071837131.1| (hypothetical protein [Leptolyngbya sp. NIES-3755] >gi|965632871|dbj|BAU12443.1| glutamyl endopeptidase [Leptolyngbya sp. NIES-3755])

HSP 1 Score: 85.5001 bits (210), Expect = 5.073e-15
Identity = 62/198 (31.31%), Postives = 88/198 (44.44%), Query Frame = 0
Query:  165 NVYAKDQRTYFDPDVYPDRTFGKLMF---PASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYV--GINPTDLSRQLPMYNKFSLIGYSEDGYSQ-----TAGIDPKCSLE--DAYQGVYFHNCDCAAGASGGALLDAS 350
            NV+ +DQR       YP    G+++         CTG LI K  V+T AHC +      +G+      F   +            S     +  GT  PE  R  DWAI++L+ PLGE  G++     P     QLP   +F+L GYS D  ++     TAG+   CS+   +    +  H+CD   GASGGA+   S
Sbjct:   74 NVFGRDQRVPMTSSAYPWSAIGRIIEIDQDGGSMCTGNLIAKDLVVTNAHCVFGE----NGEPAQKISFEPNFANGASQDRANVVS-----VVVGTDKPEQNRAKDWAILKLDQPLGEKYGWMEWASEPVSTLTQLP--KQFNLAGYSGDFPTKKTGGSTAGVHVGCSIRGFEPALNLATHDCDMTRGASGGAIFTIS 260          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1121332976|ref|WP_073640875.1| (hypothetical protein [Nostoc calcicola] >gi|1115273098|gb|OKH36471.1| hypothetical protein FACHB389_10930 [Nostoc calcicola FACHB-389])

HSP 1 Score: 85.1149 bits (209), Expect = 6.487e-15
Identity = 67/219 (30.59%), Postives = 101/219 (46.12%), Query Frame = 0
Query:  148 EGEQQSIDTRD-VHQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPAS----YYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSED--------------GYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGGALL 347
            +GE   ++ ++ +  +R+ + +KD R       YP    GK+   ++    Y CTG LI +  VLT AHC  +  T      I      V      +    YA +  +G  +  +T  + Y N DWAI++L  P+G+  GY+G      SR +    KF+L+GYS D              G S TAG+   CS+        +HNCD   GASGGA++
Sbjct:   51 KGEPSLLNQKEELPGQRVIIGSKDDRIPMTSRNYPWSAVGKIEGVSADGGGYSCTGTLISEDVVLTNAHCVVNPETRKVSQAIAFLPNLVNGVVKSKNDVAYATNVYYGTDFKNSTLTD-YAN-DWAILKLNKPIGKKYGYLGWKSLPSSRLVGDTKKFALVGYSGDFPNPKKKGYETLTAGESMTAGVHLGCSILRRQDNFLYHNCDTNQGASGGAII 267          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1178040877|ref|WP_082906375.1| (hypothetical protein [Phormidesmis priestleyi])

HSP 1 Score: 82.4185 bits (202), Expect = 4.143e-14
Identity = 69/211 (32.70%), Postives = 93/211 (44.08%), Query Frame = 0
Query:  195 YCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRL-WYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYS--------EDGYSQTAGIDPKCSLEDAY--QGVYFHNCDCAAGASGGALLDASFN---VVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQFMPT 391
            +CTG LI +  VLT AHC +  G   D        F   Y   K G+   A  +A G L W+GT  P   R +DWAII LE P+G+  G+ G     LS Q       + +GYS        E    +TA +   C + D Y   GV+  +CD   G SGG +     N   ++GIN A     ++      +Y P   N+ VP   F  T
Sbjct:    6 HCTGALIDRDLVLTNAHCIWENGQRRD------ITFAPNY---KNGQ---APETARGILYWWGTDNPNQNRRADWAIIRLERPIGDRYGWFGYQ--TLSYQELNGKTVTYVGYSTFENEKVQEFINGETAQVHIGCRVRDVYANDGVFHTDCDNGRGGSGGPIFIWQNNQPIIIGINAAEYRSGDSSYF-TQNYTPGQGNVGVPTLTFAQT 201          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1206271627|ref|WP_087882090.1| (hypothetical protein [Planktothrix rubescens] >gi|1108749959|emb|CUR24830.1| putative Glutamyl endopeptidase [Planktothrix rubescens])

HSP 1 Score: 83.1889 bits (204), Expect = 7.094e-14
Identity = 64/233 (27.47%), Postives = 92/233 (39.48%), Query Frame = 0
Query:  167 YAKDQRTYFDPDVYPDRTFGKLMFPASYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVG---INPTDLSRQLPMYNKFSLIGYSEDGY---SQTAGIDPKCSLEDAY--QGVYFHNCDCAAGASGGALL---DASFNVVGINTAHVMPSNTKLLRASDYNPTYPNIAVPAYQF 388
            +  D R     + +P    G++      +CTG LIG+  VLT AHC +  G            F   Y   +  +        W     GT  P   R +DWAII LE P+G+  G+ G   +N   L  +   Y  +S  G  E       +TA +   C + D +   GV   +CD   G SGG +    +    +VGIN A     +       +Y P   N+ VP   F
Sbjct:   50 FEDDDRIPMRSNAFPWSAIGRVQIDNGGHCTGALIGRDLVLTNAHCIWVEGQR------RGITFAPNYRNGQSPETVRGIPYRW-----GTDNPNKNRRADWAIIRLERPIGDRYGWFGYQSLNYQQLQGRTVTYAGYSTFGDEERQEFINGETAQVHIGCRVRDVFANDGVIHTDCDNGRGGSGGPIFIWQNKQPIIVGINAAEYRGESKVSFFTQNYTPGEGNVGVPTLTF 271          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|516358789|ref|WP_017748822.1| (hypothetical protein [Scytonema hofmannii] >gi|1004815828|gb|KYC41776.1| peptidase S1 [Scytonema hofmannii PCC 7110])

HSP 1 Score: 79.337 bits (194), Expect = 8.875e-13
Identity = 61/224 (27.23%), Postives = 88/224 (39.29%), Query Frame = 0
Query:  158 DVHQRRLNVYAKDQRTYFDPDVYPDRTFGKLMFPAS----YYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNSDWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSED--------------GYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGGALLDASFN---VVGINTAH 360
            D   R   +   D R       YP    GK+    +    Y+CTG LIG+  VLT AHC     TS     I      +      +       +  +G  + GT      + +DWA+++L  P+G   GY+G      S  L   N++  +GYS D              G   TA +   CS+      V  HNCD   G+SGG ++    N   +V +N A 
Sbjct:   78 DTQARSRGIVGWDDRIPLLSCKYPWSAIGKVQGLTAEGKGYHCTGTLIGEDIVLTNAHCVIDENTSQLSQKILFIPNVINRKVADKSDVALVENVVYGTDFTGTALEN--QINDWALLKLNKPIGLKYGYLGWQSLSSSTLLNNRNQYIFVGYSGDFPDPNKEKYQFFTAGKGWTANVQKGCSIVGEESNVLLHNCDATGGSSGGPIITIIGNQPYIVALNNAE 299          
BLAST of EWM26814.1 vs. NCBI_GenBank
Match: gi|1210100036|dbj|BAY19170.1| (glutamyl endopeptidase [Anabaenopsis circularis NIES-21])

HSP 1 Score: 78.9518 bits (193), Expect = 9.395e-13
Identity = 64/217 (29.49%), Postives = 95/217 (43.78%), Query Frame = 0
Query:  169 KDQRTYFDPDVYPDRTFGKLMFPA---SYYCTGQLIGKRYVLTAAHCFYSYGTSIDGDNIYHSKFRVAYHTDKEGKHYYAASSAWGRLWYGTTYPEVYRNS---DWAIIELETPLGETQGYVGINPTDLSRQLPMYNKFSLIGYSED--------------GYSQTAGIDPKCSLEDAYQGVYFHNCDCAAGASGG---ALLDASFNVVGINTAHVM 362
            +D R     + YP  T G+++  +   +Y CTG LI +  VLT AHC     T            RVA+  +     Y   + A   L  GT + +  +NS   DWA+I+++ PLG   GY+G         +    +F  +GYS D              G   TAG    CS+ D    +  H+CD A G+SGG   A +D    +V +N A ++
Sbjct:   83 RDDRLPMLSNNYPWSTVGRIVGESNSQTYTCTGTLIDEDIVLTNAHCVVDPKTG-------QVASRVAFLPNVVDGQYKDRAYAVQYL-AGTHFQD--KNSEANDWAVIKIDRPLGRKYGYLGWKSLPAKTLIRNEKRFFFVGYSGDYPQAETEKFWGLTAGQGWTAGFQAGCSIVDEQSNILLHDCDTAGGSSGGPIIASIDGEPYIVALNNAEIV 289          
The following BLAST results are available for this feature:
BLAST of EWM26814.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108905|gb|EWM26814.1|0.000e+0100.00glutamyl endopeptidase family protein [Nannochloro... [more]
gi|585103102|gb|EWM22557.1|3.424e-3033.61peptidase s1 and s6 chymotrypsin hap [Nannochlorop... [more]
gi|1082586300|gb|OFZ17242.1|2.036e-1835.10hypothetical protein A2X86_01975 [Bdellovibrionale... [more]
gi|1199210981|gb|OUR78597.1|4.067e-1530.40hypothetical protein A9Q83_06885 [Alphaproteobacte... [more]
gi|1105268943|ref|WP_071837131.1|5.073e-1531.31hypothetical protein [Leptolyngbya sp. NIES-3755] ... [more]
gi|1121332976|ref|WP_073640875.1|6.487e-1530.59hypothetical protein [Nostoc calcicola] >gi|111527... [more]
gi|1178040877|ref|WP_082906375.1|4.143e-1432.70hypothetical protein [Phormidesmis priestleyi][more]
gi|1206271627|ref|WP_087882090.1|7.094e-1427.47hypothetical protein [Planktothrix rubescens] >gi|... [more]
gi|516358789|ref|WP_017748822.1|8.875e-1327.23hypothetical protein [Scytonema hofmannii] >gi|100... [more]
gi|1210100036|dbj|BAY19170.1|9.395e-1329.49glutamyl endopeptidase [Anabaenopsis circularis NI... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3852rna3852Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications