EWM26782.1, cds3842 (CDS) Nannochloropsis gaditana

Overview
NameEWM26782.1
Unique Namecds3842
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:224126..224473 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26782.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100018g58.2762.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:224126..224473 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26782.1 vs. NCBI_GenBank
Match: gi|585108873|gb|EWM26782.1| (hypothetical protein Naga_100018g58 [Nannochloropsis gaditana])

HSP 1 Score: 244.588 bits (623), Expect = 3.968e-82
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MNHVMYNQIFHTYRHDAREQEIRQGHKGLRPIDENLSYTRETSTRVGRRNEERKRVHHIQWWEGEYTKKLHGARFRYLLNDFFGRMCWYFLYASRARKPSMSRPIQWCQCIHFYT 115
            MNHVMYNQIFHTYRHDAREQEIRQGHKGLRPIDENLSYTRETSTRVGRRNEERKRVHHIQWWEGEYTKKLHGARFRYLLNDFFGRMCWYFLYASRARKPSMSRPIQWCQCIHFYT
Sbjct:    1 MNHVMYNQIFHTYRHDAREQEIRQGHKGLRPIDENLSYTRETSTRVGRRNEERKRVHHIQWWEGEYTKKLHGARFRYLLNDFFGRMCWYFLYASRARKPSMSRPIQWCQCIHFYT 115
The following BLAST results are available for this feature:
BLAST of EWM26782.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108873|gb|EWM26782.1|3.968e-82100.00hypothetical protein Naga_100018g58 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3851rna3851Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications