EWM26801.1, cds3835 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|585108892|gb|EWM26801.1| (glycine cleavage system h protein [Nannochloropsis gaditana]) HSP 1 Score: 445.277 bits (1144), Expect = 3.790e-158 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 Query: 1 MSYSYHKSFRIFDALFRAFSPKNFTMLATATRHVARRIACSSTVFQPTLRRTIATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPLWLRRVCQGRQRRVRARLRRDHRVECVPFRGPRECEQRRGNRRVVHEVQGDRQGRIRGIDGRSGLQKTYRDGIGARSDKRDVWMIASVGRAVIVIHTEEKERGRREQGRGGTLVGGRRTTAWTRW 221 MSYSYHKSFRIFDALFRAFSPKNFTMLATATRHVARRIACSSTVFQPTLRRTIATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPLWLRRVCQGRQRRVRARLRRDHRVECVPFRGPRECEQRRGNRRVVHEVQGDRQGRIRGIDGRSGLQKTYRDGIGARSDKRDVWMIASVGRAVIVIHTEEKERGRREQGRGGTLVGGRRTTAWTRW Sbjct: 1 MSYSYHKSFRIFDALFRAFSPKNFTMLATATRHVARRIACSSTVFQPTLRRTIATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPLWLRRVCQGRQRRVRARLRRDHRVECVPFRGPRECEQRRGNRRVVHEVQGDRQGRIRGIDGRSGLQKTYRDGIGARSDKRDVWMIASVGRAVIVIHTEEKERGRREQGRGGTLVGGRRTTAWTRW 221
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|553183964|ref|XP_005854003.1| (glycine cleavage system h protein [Nannochloropsis gaditana CCMP526] >gi|422295059|gb|EKU22358.1| glycine cleavage system h protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 142.51 bits (358), Expect = 1.408e-39 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 Query: 26 MLATATRHVARRIACSSTVFQPTLRRTIATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPE 94 MLATATRHVARRIACSSTVFQPTLRRT+ATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPE Sbjct: 1 MLATATRHVARRIACSSTVFQPTLRRTLATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPE 69
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|524700074|emb|CDE07141.1| (glycine cleavage system H protein [Prevotella sp. CAG:485]) HSP 1 Score: 72.4034 bits (176), Expect = 6.883e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 49 LRRTIATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPE 94 + + +A YA SHEWVK+DGDIATVGITD+A ALG++VYVD+PE Sbjct: 1 MSKVLAELLYADSHEWVKIDGDIATVGITDYAQHALGNIVYVDMPE 46
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|212538387|ref|XP_002149349.1| (glycine cleavage system H protein [Talaromyces marneffei ATCC 18224] >gi|210069091|gb|EEA23182.1| glycine cleavage system H protein [Talaromyces marneffei ATCC 18224] >gi|679998944|gb|KFX51126.1| Glycine cleavage system H protein [Talaromyces marneffei PM1]) HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13 Identity = 40/89 (44.94%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 27 LATATRHVARRIACSSTVFQPTLRRTIA------------------TTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPL 97 LA TR +A R+ C RRT+ +Y SHEWV+LDG+IAT+GITD+AAKALGDVVYV+LP L Sbjct: 3 LAAVTRPLASRMLCQRLPVSVAARRTLPAFPRGTSMRNFSRSSQLEVKKYTESHEWVELDGNIATIGITDYAAKALGDVVYVELPTADL 91
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|655969625|ref|WP_029012217.1| (glycine cleavage system protein H [Niveispirillum irakense]) HSP 1 Score: 70.0922 bits (170), Expect = 5.407e-12 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 0 Query: 55 TTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPLWLRRVCQGRQRRVRARLRRDHRVECVPFRGPRECEQRRGNRRVVHE---VQGDRQG 150 T R+ HEW+KLDGD+ATVGITD+A +ALGDVV+V++PE R + +G+ V ++ V P + GN V E V D +G Sbjct: 2 TIRFTQDHEWIKLDGDVATVGITDYAQQALGDVVFVEVPEAG---RELTKGKDAAVVESVKAASEV-----YAPVDGTVVEGNAAVADEPSLVNTDPEG 92
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|748560868|dbj|GAM33375.1| (glycine cleavage system H protein [Talaromyces cellulolyticus]) HSP 1 Score: 71.2478 bits (173), Expect = 5.426e-12 Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 27 LATATRHVARRIACSSTVFQPTLRRTIA------------------TTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPL 97 LA TR +A R+ C RRTI +Y SHEWV+LDG++AT+GIT++AAK+LGDVVYV+LP L Sbjct: 3 LAAVTRPLASRMLCQRLPVSVAARRTIPAFPRGTAMRNFSRSSQFEVKKYTESHEWVELDGNVATIGITEYAAKSLGDVVYVELPTADL 91
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|973323272|gb|KUL83167.1| (hypothetical protein ZTR_10087 [Talaromyces verruculosus]) HSP 1 Score: 71.2478 bits (173), Expect = 5.540e-12 Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 27 LATATRHVARRIACSSTVFQPTLRRTIA------------------TTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPL 97 LA TR +A R+ C RRTI +Y SHEWV+LDG++AT+GIT++AAK+LGDVVYV+LP L Sbjct: 3 LAAVTRPLASRMLCQRLPVSVAARRTIPAFPRGTAMRNFSRSSQFEVKKYTESHEWVELDGNVATIGITEYAAKSLGDVVYVELPTADL 91
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|1120265205|ref|WP_073131497.1| (glycine cleavage system protein H [Roseomonas rosea] >gi|1110384230|emb|SHI61065.1| glycine cleavage system H protein [Roseomonas rosea]) HSP 1 Score: 68.9366 bits (167), Expect = 1.548e-11 Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 0 Query: 53 IATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEG 95 ++ TR+A SHEWV+LDGD+ATVGI+D A ALGDVV+VDLPE Sbjct: 1 MSQTRFAESHEWVRLDGDVATVGISDHAQNALGDVVFVDLPEA 43
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|503259712|ref|WP_013494373.1| (glycine cleavage system protein H [Intrasporangium calvum] >gi|315590769|gb|ADU50066.1| glycine cleavage system H protein [Intrasporangium calvum DSM 43043]) HSP 1 Score: 68.5514 bits (166), Expect = 2.727e-11 Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0 Query: 54 ATTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPE 94 A +Y HEWV++DGD+ATVGIT FAA+ALGDVVYVDLPE Sbjct: 6 ADLKYTKDHEWVRIDGDVATVGITQFAAEALGDVVYVDLPE 46
BLAST of EWM26801.1 vs. NCBI_GenBank
Match: gi|242806739|ref|XP_002484807.1| (glycine cleavage system H protein [Talaromyces stipitatus ATCC 10500] >gi|218715432|gb|EED14854.1| glycine cleavage system H protein [Talaromyces stipitatus ATCC 10500]) HSP 1 Score: 69.3218 bits (168), Expect = 3.455e-11 Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 27 LATATRHVARRIACSSTVFQPTLRRTIA------------------TTRYATSHEWVKLDGDIATVGITDFAAKALGDVVYVDLPEGPL 97 LA TR +A R+ C RR+I +Y SHEWV+LDG++AT+GIT++AAK+LGDVVYV+LP L Sbjct: 3 LAALTRPLASRMLCQRLPVTVAARRSIPAFPRGTTIRSFSRSSQFEVKKYTESHEWVELDGNVATIGITEYAAKSLGDVVYVELPTADL 91 The following BLAST results are available for this feature:
BLAST of EWM26801.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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