EWM26843.1, cds3831 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|585108937|gb|EWM26843.1| (ubiquitin family [Nannochloropsis gaditana]) HSP 1 Score: 960.288 bits (2481), Expect = 0.000e+0 Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query: 1 MSEVTDPLNSSGGNSTTTPRTPNSGASDESDSSETGLLLGRVTGSSSTAPALNKSSRRNGSTSVSGSTTSSNNTSTTESDACIRTSRTRVRGTPPPSSSPPPLPRPPQSSPGLPPAQFVASGPRSTPGVATVREPPADVLIHAKSSVTCHDGTSQLDSTILNGGTPGSEKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEGETAEGGEEGSDFPPGFGGAGVDGGPAGSVGERGTPIHGTGVGQ 476
MSEVTDPLNSSGGNSTTTPRTPNSGASDESDSSETGLLLGRVTGSSSTAPALNKSSRRNGSTSVSGSTTSSNNTSTTESDACIRTSRTRVRGTPPPSSSPPPLPRPPQSSPGLPPAQFVASGPRSTPGVATVREPPADVLIHAKSSVTCHDGTSQLDSTILNGGTPGSEKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEGETAEGGEEGSDFPPGFGGAGVDGGPAGSVGERGTPIHGTGVGQ
Sbjct: 1 MSEVTDPLNSSGGNSTTTPRTPNSGASDESDSSETGLLLGRVTGSSSTAPALNKSSRRNGSTSVSGSTTSSNNTSTTESDACIRTSRTRVRGTPPPSSSPPPLPRPPQSSPGLPPAQFVASGPRSTPGVATVREPPADVLIHAKSSVTCHDGTSQLDSTILNGGTPGSEKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEGETAEGGEEGSDFPPGFGGAGVDGGPAGSVGERGTPIHGTGVGQ 476
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|695381981|ref|XP_009517257.1| (hypothetical protein PHYSODRAFT_538135 [Phytophthora sojae] >gi|348690168|gb|EGZ29982.1| hypothetical protein PHYSODRAFT_538135 [Phytophthora sojae]) HSP 1 Score: 169.088 bits (427), Expect = 2.708e-45 Identity = 107/261 (41.00%), Postives = 148/261 (56.70%), Query Frame = 0
Query: 172 ISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALN---TNRVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
I L+IKTL K +EV S +V ELK +L + AEGKFLRLI QGK+L+ D A+LES ++ + +HC S PP+A + + A +G P+ DDPA RRGFDRLR S +E+ ALR YF Q+ Y + +A P E++EDR R+E+EWM QG +SEFALN T R+ + GM + GT +FL+GF+MG LG L L + QK+G++LGVS + +++ RA
Sbjct: 37 IVLKIKTLSEKPLRVEVAPSS-SVGELK-ELVKKKANAEGKFLRLIHQGKMLSDDKATLESCKVKNEDFIHCAISSAPPKAVVN----QMAAAGTDSDPEERDDPATRRGFDRLRDR-LSREEIQALRLYFYPQLSVYIS--QAARVP-GESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIAMDTQI---DMNGMNNSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 284
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|301119683|ref|XP_002907569.1| (ubiquitin family protein, putative [Phytophthora infestans T30-4] >gi|262106081|gb|EEY64133.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 166.392 bits (420), Expect = 2.601e-44 Identity = 107/260 (41.15%), Postives = 146/260 (56.15%), Query Frame = 0
Query: 172 ISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAAR--RGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
I L++KTL K +E+ S TV ELK + + AEGKFLRLI QGK+L+ D A+LES ++ VHC S PP+A + + A E P+ DDP+ RRGFDRLR S +E+ ALR YF Q+ Y + +AE P E++EDR R+E+EWM QG +SEFALN V R A+ GM + GT +FL+GF+MG LG L L + QK+G++LGVS + +++ RA
Sbjct: 34 IVLKVKTLSEKPLRVEIFPSA-TVGELKEIVKKK-ANAEGKFLRLIHQGKMLSDDKATLESCKVKTEDFVHCAISSAPPKAVVN---QMAATDSE---PEERDDPSTRRGFDRLRDR-LSREEIQALRLYFYPQLSVYIS--QAERVP-GESSEDRIYRLEEEWMASQGPQSEFALNV--VPTARIAMDAQIDMNGMNNSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 279
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|675176639|ref|XP_008897204.1| (hypothetical protein PPTG_05412 [Phytophthora parasitica INRA-310] >gi|566011197|gb|ETI34108.1| hypothetical protein F443_19315 [Phytophthora parasitica P1569] >gi|567948734|gb|ETK74475.1| hypothetical protein L915_18739 [Phytophthora parasitica] >gi|567977397|gb|ETL27900.1| hypothetical protein L916_18641 [Phytophthora parasitica] >gi|568006897|gb|ETL81144.1| hypothetical protein L917_18466 [Phytophthora parasitica] >gi|568036743|gb|ETM34345.1| hypothetical protein L914_18554 [Phytophthora parasitica] >gi|568102994|gb|ETN17665.1| hypothetical protein PPTG_05412 [Phytophthora parasitica INRA-310] >gi|570314969|gb|ETO62917.1| hypothetical protein F444_19266 [Phytophthora parasitica P1976] >gi|570938743|gb|ETP04000.1| hypothetical protein F441_19135 [Phytophthora parasitica CJ01A1] >gi|570969035|gb|ETP32154.1| hypothetical protein F442_19090 [Phytophthora parasitica P10297] >gi|970659011|gb|KUF96708.1| hypothetical protein AM587_10006983 [Phytophthora nicotianae]) HSP 1 Score: 164.851 bits (416), Expect = 1.046e-43 Identity = 106/260 (40.77%), Postives = 147/260 (56.54%), Query Frame = 0
Query: 172 ISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAAR--RGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
+ L++KTL K +E+ S TV ELK +L + AEGKFLRLI QGK+L+ D A+LES ++ VHC S PP+A + + A E P+ DDP+ RRGFDRLR S +E+ ALR YF Q+ + + +AE P E++EDR R+E+EWM QG +SEFALN V R A+ GM + GT +FL+GF+MG LG L L + QK+G++LGVS + +++ RA
Sbjct: 34 LVLKVKTLSEKPLRVEIFPSA-TVGELK-ELVKKKANAEGKFLRLIHQGKMLSDDKATLESCKVKSEDFVHCAISSAPPKAVVN---QMAATDSE---PEERDDPSTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFIS--QAERVP-GESSEDRIYRLEEEWMASQGPQSEFALNV--VPTARIAMDAQIDMNGMNNSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 279
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|953499936|emb|CEG38577.1| (ubiquitin family [Plasmopara halstedii]) HSP 1 Score: 160.999 bits (406), Expect = 3.162e-42 Identity = 103/262 (39.31%), Postives = 145/262 (55.34%), Query Frame = 0
Query: 171 LISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALN---TNRVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
+I L++KTL K +E+ S +V+ELK + + + AEGKFLRLI QGK+L+ D A+LES ++ D VHC S PP+A I S +E + DD RRGFDRLR S +E+ ALR YF Q+ + + E G E++EDR R+E+EWM QG +SEFALN T R+ + GM + GT +FL+GF+MG LG L L + QK+G++LGVS + +++ RA
Sbjct: 32 IIVLKVKTLSEKPLRVEIVHSA-SVAELKELVKKKV-NAEGKFLRLIHQGKMLSDDKATLESCKVKDDDFVHCAISAAPPKAII-----NQVASTAIELEE-QDDETTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFISRAERIHG---ESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIATDTQIDI---NGMSNSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRA 278
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|698777538|ref|XP_009821813.1| (hypothetical protein H257_00704 [Aphanomyces astaci] >gi|574123938|gb|ETV89413.1| hypothetical protein H257_00704 [Aphanomyces astaci]) HSP 1 Score: 153.68 bits (387), Expect = 1.569e-39 Identity = 100/265 (37.74%), Postives = 144/265 (54.34%), Query Frame = 0
Query: 171 LISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVF--AARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEG 433
+++LR+KTL K +++ A+ +V ELK + ++ AEGKFLRLI QGK+L D A+L S I +HC S+ PP++ ++ + + D+P RRGFD LR S ++V ALR +F QV + A EG E+ EDR R+E+EWM QG +SEFALN + A R M D ++ GT+ D ++G MGF LGF LF LW QK+GI++GV+ +L N ++R EG
Sbjct: 30 ILNLRVKTLSEKPLNIDISATA-SVGELKDMI-KAKGEAEGKFLRLIHQGKMLNDDKAALLSCNIKQNDFIHCAMSNAPPKSLVQQMTHQQEEAAL-------DEPTHRRGFDCLRD-TLSREDVQALRLHFYPQVSTMISQSVAREG---ESVEDRIYRIEEEWMAAQGPQSEFALNVRPRGGPMTIHDSAHHRIDMPDMSSVD-NEGTTVDMVWGVAMGFVLGFFMLFLLWERTIPRRQKLGIVIGVAINLLLNFMQRLTPEG 280
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|813122072|ref|XP_012196496.1| (hypothetical protein SPRG_02534 [Saprolegnia parasitica CBS 223.65] >gi|641539020|gb|KDO32841.1| hypothetical protein SPRG_02534 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 152.14 bits (383), Expect = 5.336e-39 Identity = 103/270 (38.15%), Postives = 141/270 (52.22%), Query Frame = 0
Query: 169 EKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEM---------GTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
+ +++LR+KTL + +E+ AS TV KS + AEGKFLRLI QGK+L+ D+A+L + + +HC S PP+ ++ E E D +D + RRGFD LR S +EV ALR YF QV A E EG ETAEDR R+E+EWM QG +SEFALN V R R + ++M GT D ++G MG LGF LF LW QK+GI++GV +L N+++R+
Sbjct: 27 DAMLTLRVKTLSERPLTIELPAST-TVGAFKSVIKEK-ANAEGKFLRLIHQGKMLSDDSATLLACHVKTDDFIHCAMSAAPPKCVVQ-------QMQEQEEDDASDSQS-RRGFDSLRDR-LSREEVQALRLYFYPQVSAMINQSEPREG---ETAEDRIYRVEEEWMASQGPQSEFALN----VRPRPGSLPLRANFDTQHRIDMPELALMGGDNEGTQVDMIWGVAMGLILGFFMLFLLWERTIPRRQKVGIVVGVVMNLMLNVVQRS 278
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|673016812|ref|XP_008862367.1| (hypothetical protein H310_01118 [Aphanomyces invadans] >gi|673016816|ref|XP_008862369.1| hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574481570|gb|ETW08562.1| hypothetical protein H310_01118 [Aphanomyces invadans] >gi|574481571|gb|ETW08563.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 152.14 bits (383), Expect = 5.504e-39 Identity = 100/267 (37.45%), Postives = 146/267 (54.68%), Query Frame = 0
Query: 171 LISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTN----RVVATRAVFAARRGGMEDGRGLEMGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRAEMEG 433
+++LR+KTL K ++++A+ TV +LK + ++ AEGKFLRLI QGKLL D A L S + + +HC S PP++ ++ + +V +D+P RRGFD LR + +EV ALR +F QV A + A EG E+ EDR R+E+EWM QG +SEFALN + + R M D ++ GT+ D ++G MG LGF LF LW QK+GI++GV+ +L N ++R EG
Sbjct: 30 MLTLRVKTLSEKPLNIDINATA-TVGDLKDMI-KTKGHAEGKFLRLIHQGKLLNDDKAVLLSSNVKNNDFIHCAMSSVPPKSLVQ---QMTHQQDDV----ASDEPNHRRGFDCLRD-TLTREEVQALRLHFYPQVSAMISQSVAREG---ESVEDRIYRVEEEWMAAQGPQSEFALNVRPRGGHITMESFHDSIHRIDMPDMPLID-NEGTTVDMIWGVAMGLILGFFMLFLLWERSIPRRQKLGIVVGVAINLLLNFMQRLTPEG 282
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|1173951175|gb|OQR99088.1| (ubiquitin family protein [Achlya hypogyna]) HSP 1 Score: 151.754 bits (382), Expect = 8.333e-39 Identity = 103/273 (37.73%), Postives = 142/273 (52.01%), Query Frame = 0
Query: 169 EKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPA----QRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEM---------GTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRR 428
E L+SLR+KTL K +E+ AS T+ K +L + AEGKFLRLI QGK+L+ DTA+L + + +HC S PP+ ++ + + +D A RRGFD LR S +EV ALR YF QV A + EG E+AEDR R+E+EWM QG +SEFALN V R+ + R + ++M GT D ++G MG LGF LF LW QK+GI++GV +L N+++R
Sbjct: 27 EVLLSLRVKTLSEKPLTIELPAST-TIGAFK-ELIKEKADAEGKFLRLIHQGKMLSDDTATLLACHVKTNDFIHCAMSAAPPKCVVQ------------QMTEQEEDDATASENRRGFDCLRDR-LSREEVQALRLYFYPQVSAMINQSQPREG---ESAEDRIYRIEEEWMASQGPQSEFALN----VRPRSGSLSTRANFDTQHRIDMPELALMGGDNEGTQVDMIWGIAMGLILGFFMLFLLWERTIPRRQKVGIVMGVVMNLMLNVVQR 277
BLAST of EWM26843.1 vs. NCBI_GenBank
Match: gi|669148024|ref|XP_008609574.1| (hypothetical protein SDRG_05626 [Saprolegnia diclina VS20] >gi|530738551|gb|EQC36793.1| hypothetical protein SDRG_05626 [Saprolegnia diclina VS20]) HSP 1 Score: 150.214 bits (378), Expect = 3.338e-38 Identity = 101/270 (37.41%), Postives = 137/270 (50.74%), Query Frame = 0
Query: 169 EKLISLRIKTLDSKEHLMEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETAEDRRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLEM---------GTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVSCSLGWNIIRRA 429
+ +++LR+KTL K +E+ AS TV KS + AEGKFLRLI QGK+L+ D A+L + + +HC S PP+ ++ E+ V RRGFD LR S +EV ALR +F QV A E EG ETAEDR R+E+EWM QG +SEFALN V R R + ++M GT D ++G MG LGF LF LW QK+GI++GV +L N+++R+
Sbjct: 27 DAMLTLRVKTLSEKPLTIELPAST-TVGAFKSAIKEK-ANAEGKFLRLIHQGKMLSDDAATLLACHVKTNDFIHCAMSAAPPKCVVQQMQEQEEDDASVS--------QNRRGFDSLRDR-LSREEVQALRLHFYPQVSATINQSEPREG---ETAEDRIYRVEEEWMASQGPQSEFALN----VRPRPGSLPLRANFDTQHRIDMPELALMGGDNEGTQVDMIWGIAMGLILGFFMLFLLWERTIPRRQKVGIVIGVVMNLMLNVVQRS 278 The following BLAST results are available for this feature:
BLAST of EWM26843.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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