EWM26866.1, cds3805 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|585108961|gb|EWM26866.1| (nadh-glutamate synthase small chain [Nannochloropsis gaditana]) HSP 1 Score: 386.341 bits (991), Expect = 9.575e-136 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MNFSRQRQGSGHRERGGWPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDEAYIGAIEERGRRGRGFAGRKGREEETALGGARTWTPAAGVYAIFDERSKVSGLFSRHFSRPQKPSRAIPSLLFGERGELGREEEKR 191
MNFSRQRQGSGHRERGGWPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDEAYIGAIEERGRRGRGFAGRKGREEETALGGARTWTPAAGVYAIFDERSKVSGLFSRHFSRPQKPSRAIPSLLFGERGELGREEEKR
Sbjct: 1 MNFSRQRQGSGHRERGGWPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDEAYIGAIEERGRRGRGFAGRKGREEETALGGARTWTPAAGVYAIFDERSKVSGLFSRHFSRPQKPSRAIPSLLFGERGELGREEEKR 191
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|298710244|emb|CBJ26319.1| (Glutamate synthase (NADH/NADPH-dependent) [Ectocarpus siliculosus]) HSP 1 Score: 133.65 bits (335), Expect = 3.804e-33 Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSE-VTEDEAYIGAI 111
WPA LV+LAMGF++PES I L L++DQR NI A YGDYRTN +GVF+AGDCRRGQSLVVWAINEGRG A++VN +L K+E E+E +IGA+
Sbjct: 465 WPAQLVVLAMGFVSPESAISKPLKLELDQRENIHAPYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAADAVNSYLAAKAEQQMEEETFIGAM 559
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|676382599|ref|XP_009034578.1| (hypothetical protein AURANDRAFT_52709 [Aureococcus anophagefferens] >gi|323455150|gb|EGB11019.1| hypothetical protein AURANDRAFT_52709 [Aureococcus anophagefferens]) HSP 1 Score: 129.413 bits (324), Expect = 1.277e-31 Identity = 58/82 (70.73%), Postives = 71/82 (86.59%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKS 99
WPADLVILAMGF++PE T+P L LD DQR NIRA+YGDYR++++GVFAAGDCRRGQSLVVWAINEGRG A +++L+ +S
Sbjct: 465 WPADLVILAMGFVSPELTVPRQLGLDTDQRDNIRAEYGDYRSSLEGVFAAGDCRRGQSLVVWAINEGRGAALKCDEYLMTRS 546
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|1210529990|dbj|GAX11523.1| (glutamate synthase (NADPH/NADH) small chain [Fistulifera solaris]) HSP 1 Score: 127.487 bits (319), Expect = 6.697e-31 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDEAYI 108
WPADLV+L+MGF+ PE I L LD DQR NI A YGDYRTNV+GVFA GDCRRGQSLVVWAINEGRGVA++ +++L +K + A++
Sbjct: 472 WPADLVVLSMGFVAPEQYIVEELGLDTDQRKNIHAVYGDYRTNVEGVFAGGDCRRGQSLVVWAINEGRGVADACHQYLQQKRDSVPSSAHV 562
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|1210525177|dbj|GAX15936.1| (glutamate synthase (NADPH/NADH) small chain [Fistulifera solaris]) HSP 1 Score: 126.331 bits (316), Expect = 2.157e-30 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSEVTEDEAYI 108
WPADLV+L+MGF+ PE I L LD DQR NI A YGDYRTNV+GVFA GDCRRGQSLVVWAINEGRGVA++ +++L +K + A +
Sbjct: 472 WPADLVVLSMGFVAPEQYIVEELGLDTDQRKNIHAVYGDYRTNVEGVFAGGDCRRGQSLVVWAINEGRGVADACHQYLQQKRDSVPSSAQV 562
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|1072232368|gb|OEU17099.1| (hypothetical protein FRACYDRAFT_260715 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 124.02 bits (310), Expect = 6.596e-30 Identity = 54/81 (66.67%), Postives = 71/81 (87.65%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEK 98
WPADLV+L+MGF++PE+ + L LDVDQR+NI+A YGD+RT+V+GVFA GDCRRGQSLVVWAINEGRG A++ +++L +K
Sbjct: 398 WPADLVVLSMGFLSPEAYVTEELGLDVDQRNNIQAVYGDFRTSVEGVFAGGDCRRGQSLVVWAINEGRGTADACDQYLQQK 478
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|970656231|gb|KUF94268.1| (helicase mot1 [Phytophthora nicotianae]) HSP 1 Score: 124.02 bits (310), Expect = 7.113e-30 Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 0
Query: 19 PADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIE---KSEVTEDEAY 107
P DLV+ AMGF++PE I L+L+VDQR NIRA YGDY+T+V+GVFAAGDCRRGQSLVVWAINEGRGVA++V K+ ++ + EV++++ +
Sbjct: 422 PCDLVLFAMGFVHPEQKIAEALNLEVDQRRNIRAAYGDYQTSVEGVFAAGDCRRGQSLVVWAINEGRGVADAVEKYFLQEGYQPEVSQNQRF 513
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|1200572312|gb|OUW83022.1| (glutamate synthase, partial [Chitinophagales bacterium TMED214]) HSP 1 Score: 115.931 bits (289), Expect = 9.320e-30 Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFL 95
WPA L++LAMGF+ PES + L+VD R N +A++G Y TNVDGVFAAGDCRRGQSLVVWAINEGRG A +++ +L
Sbjct: 43 WPAQLILLAMGFLGPESYLAEAAGLEVDSRSNFKAEHGQYATNVDGVFAAGDCRRGQSLVVWAINEGRGAARAIDIYL 120
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|1072232398|gb|OEU17129.1| (NADH-glutamate synthase small subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 124.02 bits (310), Expect = 9.627e-30 Identity = 54/81 (66.67%), Postives = 71/81 (87.65%), Query Frame = 0
Query: 18 WPADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEK 98
WPADLV+L+MGF++PE+ + L LDVDQR+NI+A YGD+RT+V+GVFA GDCRRGQSLVVWAINEGRG A++ +++L +K
Sbjct: 416 WPADLVVLSMGFLSPEAYVTEELGLDVDQRNNIQAVYGDFRTSVEGVFAGGDCRRGQSLVVWAINEGRGTADACDQYLQQK 496
BLAST of EWM26866.1 vs. NCBI_GenBank
Match: gi|570971936|gb|ETP34989.1| (hypothetical protein F442_16769 [Phytophthora parasitica P10297]) HSP 1 Score: 124.02 bits (310), Expect = 9.982e-30 Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 0
Query: 19 PADLVILAMGFMNPESTIPSGLSLDVDQRHNIRADYGDYRTNVDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIE---KSEVTEDEAY 107
P DLV+ AMGF++PE I L+L+VDQR NIRA YGDY+T+V+GVFAAGDCRRGQSLVVWAINEGRGVA++V K+ ++ + EV++++ +
Sbjct: 450 PCDLVLFAMGFVHPEQKIAEALNLEVDQRRNIRAAYGDYQTSVEGVFAAGDCRRGQSLVVWAINEGRGVADAVEKYFLQEGYQPEVSQNQRF 541 The following BLAST results are available for this feature:
BLAST of EWM26866.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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