EWM30291.1, cds379 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|585112950|gb|EWM30291.1| (nadh ubiquinone [Nannochloropsis gaditana]) HSP 1 Score: 470.315 bits (1209), Expect = 6.607e-168 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MALSRARIIAMTTSRAIRGVPGCIRDPCSSSITGQNVTRTCIRELHASGRASKSTEVTKAAGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
MALSRARIIAMTTSRAIRGVPGCIRDPCSSSITGQNVTRTCIRELHASGRASKSTEVTKAAGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK
Sbjct: 1 MALSRARIIAMTTSRAIRGVPGCIRDPCSSSITGQNVTRTCIRELHASGRASKSTEVTKAAGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|224007275|ref|XP_002292597.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971459|gb|EED89793.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 330.102 bits (845), Expect = 1.370e-112 Identity = 157/186 (84.41%), Postives = 166/186 (89.25%), Query Frame = 0
Query: 48 SGRASKSTEVTKAAGGVDQLLK------TKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
S +AS +T GVD+LL T N VEY VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLLKLRK
Sbjct: 31 SDKASSTTSSLTRLDGVDELLTGTGGVPTSNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 216
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|299471504|emb|CBN79990.1| (NUO10 homolog, NADH dehydrogenase (ubiquinone) subunit 10 [Ectocarpus siliculosus]) HSP 1 Score: 328.946 bits (842), Expect = 5.547e-112 Identity = 155/179 (86.59%), Postives = 168/179 (93.85%), Query Frame = 0
Query: 50 RASKSTEVTKAAGGVDQLLKT-KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
R S+E+T+A VDQL++ K GVE+VVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAA+RYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLL+L+K
Sbjct: 48 RKPTSSELTRAEN-VDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 225
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|397607309|gb|EJK59639.1| (hypothetical protein THAOC_20103 [Thalassiosira oceanica]) HSP 1 Score: 325.479 bits (833), Expect = 1.307e-110 Identity = 155/187 (82.89%), Postives = 165/187 (88.24%), Query Frame = 0
Query: 47 ASGRASKSTEVTKAAGGVDQLLK------TKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
A +AS +T GVD++L N VEY VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLLKLRK
Sbjct: 36 APEKASSTTSSLTRLEGVDEVLTGMGGVPVNNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 222
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|1072231269|gb|OEU16002.1| (NADH:ubiquinone reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 320.857 bits (821), Expect = 8.979e-109 Identity = 147/164 (89.63%), Postives = 158/164 (96.34%), Query Frame = 0
Query: 64 VDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
+DQ+ K+ VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALL+GMLQLQKK+KGNK LLLK+RK
Sbjct: 61 LDQV-PVKDNVEYTISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLFGMLQLQKKIKGNKALLLKMRK 223
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|219130938|ref|XP_002185609.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402949|gb|EEC42907.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 317.005 bits (811), Expect = 3.605e-108 Identity = 146/158 (92.41%), Postives = 155/158 (98.10%), Query Frame = 0
Query: 70 TKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
T + VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG++QLQKKVKGNKGLLL+LRK
Sbjct: 9 TADNVEYAISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLIQLQKKVKGNKGLLLRLRK 166
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|1210511446|dbj|GAX29260.1| (NADH dehydrogenase (ubiquinone) Fe-S protein 7 [Fistulifera solaris] >gi|1210512984|dbj|GAX27992.1| NADH dehydrogenase (ubiquinone) Fe-S protein 7 [Fistulifera solaris]) HSP 1 Score: 318.161 bits (814), Expect = 8.216e-108 Identity = 149/188 (79.26%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 40 TCIRELHASGRASKSTEVTKAAGGVDQLLKTKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
T + A G+ E+ G V + VEY +S+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AA+RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYA+VRGCDRIVPVDIYVPGCPPTAEALLYG++QLQKK+K NKGLLL+LRK
Sbjct: 29 TAQSQTSALGKLDNVEEMLTGGGNV----PVADNVEYAISRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAIVRGCDRIVPVDIYVPGCPPTAEALLYGLIQLQKKIKSNKGLLLRLRK 212
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|673025950|ref|XP_008866936.1| (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Aphanomyces invadans] >gi|574476983|gb|ETW03980.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Aphanomyces invadans]) HSP 1 Score: 311.997 bits (798), Expect = 1.537e-105 Identity = 149/195 (76.41%), Postives = 165/195 (84.62%), Query Frame = 0
Query: 37 VTRTCIRELHASGRASKSTEVTKAAGGVDQLLKT----KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
V+R + A+ +++S V K + L T +N VEYVV+KVDDLVNW R+ SLWPMTFGLACCAVEMMH+A +RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALR+VYDQMPEPR+V+SMGSCANGGGYYHYSYAVVRG DRIVPVDIYVPGCPPTAEA LY MLQLQKK+KGNKGLLLKLRK
Sbjct: 12 VSRVLPTSVAAAPLSTQSDAVAKTS--FKDLFSTEANARNSVEYVVAKVDDLVNWGRRSSLWPMTFGLACCAVEMMHTAGSRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRYVLSMGSCANGGGYYHYSYAVVRGVDRIVPVDIYVPGCPPTAEAFLYAMLQLQKKIKGNKGLLLKLRK 204
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|1173951597|gb|OQR99442.1| (NADH ubiquinone oxidoreductase [Thraustotheca clavata]) HSP 1 Score: 310.842 bits (795), Expect = 2.355e-105 Identity = 146/184 (79.35%), Postives = 159/184 (86.41%), Query Frame = 0
Query: 47 ASGRASKSTEVTKAAGGVDQLLK---TKNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
A G + ++ A V Q L+ KN VEYVVSKVDDLVNWAR+GS+WPMTFGLACCAVEMMH+A +RYD ER GMVFRASPRQSDVMIVAGTLTNKMAPA R+VYDQMPEPR+VVSMGSCANGGGYYHYSY+VVRG DRI+PVDIYVPGCPPTAEALLYGMLQLQKK+K NK LLLKLRK
Sbjct: 3 ARGVPAAKKALSTAPASVSQFLEPNNAKNSVEYVVSKVDDLVNWARRGSMWPMTFGLACCAVEMMHTAGSRYDFERMGMVFRASPRQSDVMIVAGTLTNKMAPAFRRVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGVDRIIPVDIYVPGCPPTAEALLYGMLQLQKKIKSNKSLLLKLRK 186
BLAST of EWM30291.1 vs. NCBI_GenBank
Match: gi|698820757|ref|XP_009843407.1| (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Aphanomyces astaci] >gi|574101475|gb|ETV67038.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Aphanomyces astaci]) HSP 1 Score: 310.842 bits (795), Expect = 3.613e-105 Identity = 142/157 (90.45%), Postives = 150/157 (95.54%), Query Frame = 0
Query: 71 KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227
KN VEYVV+KVDDLVNW R+ SLWPMTFGLACCAVEMMH+A +RYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALR+VYDQMPEPR+V+SMGSCANGGGYYHYSYAVVRG DRIVPVDIYVPGCPPTAEA LY MLQLQKK+KGNKGLLLKLRK
Sbjct: 48 KNSVEYVVAKVDDLVNWGRRSSLWPMTFGLACCAVEMMHTAGSRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRYVLSMGSCANGGGYYHYSYAVVRGVDRIVPVDIYVPGCPPTAEAFLYAMLQLQKKIKGNKGLLLKLRK 204 The following BLAST results are available for this feature:
BLAST of EWM30291.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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