EWM26911.1, cds3780 (CDS) Nannochloropsis gaditana

Overview
NameEWM26911.1
Unique Namecds3780
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:48992..49306 -
Alignment locationCM002462.1:48763..48897 -
Alignment locationCM002462.1:48496..48660 -
Alignment locationCM002462.1:48222..48404 -
Alignment locationCM002462.1:47935..48003 -
Alignment locationCM002462.1:47546..47696 -
Alignment locationCM002462.1:47201..47454 -
Alignment locationCM002462.1:46878..46987 -
Alignment locationCM002462.1:46673..46733 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26911.1
ProductArrestin
Orig transcript idgnl|cribi|Naga_100103g1.7048.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:48992..49306 -
CM002462.1supercontigCM002462.1:48763..48897 -
CM002462.1supercontigCM002462.1:48496..48660 -
CM002462.1supercontigCM002462.1:48222..48404 -
CM002462.1supercontigCM002462.1:47935..48003 -
CM002462.1supercontigCM002462.1:47546..47696 -
CM002462.1supercontigCM002462.1:47201..47454 -
CM002462.1supercontigCM002462.1:46878..46987 -
CM002462.1supercontigCM002462.1:46673..46733 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR011021Arrestin-like_N
Homology
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|585109041|gb|EWM26911.1| (Arrestin [Nannochloropsis gaditana])

HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query:    1 MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL 480
            MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL
Sbjct:    1 MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL 480          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|585106318|gb|EWM24759.1| (Arrestin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 168.703 bits (426), Expect = 3.794e-46
Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 0
Query:  100 LDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPA 267
            + D AL +VA TK+GISLWL K  FYPG+T+ GKMKA  TS+ ++RA+K KL S A A W   +G       A+L LAPT+E  LQE  P  + FVLE  ++YEW V+  LP SLPSSF FKK T++ +  THIA+ LTL +++P W D KL Y L+VH +P +ITP 
Sbjct:   19 IQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPV 186          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|646722531|gb|KDR23489.1| (Arrestin domain-containing protein 2 [Zootermopsis nevadensis])

HSP 1 Score: 71.2478 bits (173), Expect = 1.182e-9
Identity = 87/355 (24.51%), Postives = 136/355 (38.31%), Query Frame = 0
Query:  120 PKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSG--------EHSSTYYAALEL----------APTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLE--------YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAK-SACSHVPDLSVPI 447
            P   +Y G+TV G++   L S K+IR +  K   EA   WTE+          E  + Y+   E               E+VL EG             E+ +    VLPP LPSSF  + G        HI + + + +D P+  D +++          L  H T  A  P+MQ  VE R       CC     G   + L++P+T         V   D P+++ ++N S   +TDV+  L         +   T  AT  Y  +  E L  S+V+  +    H+ T    + +   P  D+  C                    +  + Y+L++ A+ S C +    S PI
Sbjct:   13 PTQTYYSGETVSGRVVLSLNSSKSIRGIVIKFKGEANVHWTENESRKNSDGTTEEHTVYFQGNEKYFESKYHLVGGRADEMVLPEG-------------EHCFPFSTVLPPKLPSSFEGEFG--------HIRYTVKVVVDRPWKFDHEIKSAFTVISPVDLNTHET--AKNPSMQE-VEKR------FCCLCCESGPLTMALSLPVT-------GYVPGQDIPVTIEIDNASNVCVTDVKCKL---------KKLITFIATSPYGSSREEELTVSEVIFDSVQPRHSNTATQKMTVPPLPPSDLDNCE-------------------IIDLAYYLKVVAEVSGCHNALKTSAPI 302          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1059411652|ref|XP_017778725.1| (PREDICTED: arrestin domain-containing protein 17-like isoform X1 [Nicrophorus vespilloides])

HSP 1 Score: 70.4774 bits (171), Expect = 1.654e-9
Identity = 61/239 (25.52%), Postives = 106/239 (44.35%), Query Frame = 0
Query:  113 SGISLWLPKTDFY--PGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSST---------YYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWP-DCKLE-YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALV 338
            S   ++L   D Y   G  ++G +    +S KT++ +K K   +A   W+E+   ++S+         +Y+A E     E+ L          V  +R  +++   F LP  LPSSFR + G         + +M+  S+  P++  D + E  F  V      + P ++ PV   + + +  CC FF+KG   ++  + IT   F  G  V     PI + VEN++   L  V+  L+
Sbjct:    3 SKCDVYLENYDRYYCAGQQIVGHLLCTFSSDKTVKGIKIKFKGDASTRWSETERHYNSSTKRTESRTVWYSAEETYFVYEMNLLNNVSE----VTVKRGVHKYPFTFTLPLLLPSSFRGQHG--------KVKYMIKGSVKRPFFDFDYEAESEFTLVSPINLNLNPTLRVPVNFHKKKNL--CCMFFKKGAVTVEANIAIT--GFVAGQPV-----PIYLHVENLTNSNLDTVKFKLI 220          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1059411654|ref|XP_017778726.1| (PREDICTED: arrestin domain-containing protein 4-like isoform X2 [Nicrophorus vespilloides])

HSP 1 Score: 70.4774 bits (171), Expect = 1.776e-9
Identity = 61/239 (25.52%), Postives = 106/239 (44.35%), Query Frame = 0
Query:  113 SGISLWLPKTDFY--PGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSST---------YYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWP-DCKLE-YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALV 338
            S   ++L   D Y   G  ++G +    +S KT++ +K K   +A   W+E+   ++S+         +Y+A E     E+ L          V  +R  +++   F LP  LPSSFR + G         + +M+  S+  P++  D + E  F  V      + P ++ PV   + + +  CC FF+KG   ++  + IT   F  G  V     PI + VEN++   L  V+  L+
Sbjct:    3 SKCDVYLENYDRYYCAGQQIVGHLLCTFSSDKTVKGIKIKFKGDASTRWSETERHYNSSTKRTESRTVWYSAEETYFVYEMNLLNNVSE----VTVKRGVHKYPFTFTLPLLLPSSFRGQHG--------KVKYMIKGSVKRPFFDFDYEAESEFTLVSPINLNLNPTLRVPVNFHKKKNL--CCMFFKKGAVTVEANIAIT--GFVAGQPV-----PIYLHVENLTNSNLDTVKFKLI 220          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|985385871|ref|XP_015366545.1| (PREDICTED: arrestin domain-containing protein 3-like [Diuraphis noxia])

HSP 1 Score: 62.3882 bits (150), Expect = 6.746e-7
Identity = 60/234 (25.64%), Postives = 100/234 (42.74%), Query Frame = 0
Query:  120 PKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSG--------EHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAIT--PAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVL 343
            P   F PG ++ G++    +S   IR +K K   EA  SWTE           E+ S  Y A E     ++ L  G   G    LE   +  +     LP  LPS+F  + G        HI ++  +++DIP+  D + E   +V  +P  +   P++  P+  +E +    CCC    G   L     +  LP+S    V     P++V ++N    T+  V++ L  +++ 
Sbjct:   13 PTAVFMPGQSLTGRVLVATSSSVKIRGIKLKFRGEAKVSWTEQESRRSDNGETENYSVKYDAEEEYFENKMTLVGG---GGESQLEAGEQV-YPFNISLPHQLPSTFNGEHG--------HIRYIAKVTIDIPWAKDKETEKTFQV-ISPLNLNDEPSLAEPI--KEEKEKFYCCCCCESGPTTL-----VVCLPYS--GFVPGQIIPLTVELDNNXNVTIEAVKIKLKRDLLF 224          
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1049290580|ref|XP_017542012.1| (PREDICTED: arrestin domain-containing protein 3-like [Pygocentrus nattereri])

HSP 1 Score: 61.2326 bits (147), Expect = 9.328e-7
Identity = 46/174 (26.44%), Postives = 81/174 (46.55%), Query Frame = 0
Query:  124 FYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRP-VELRESRPISSCCCFFRKGEANLQL 296
            F  GD + G++  +++ K TI+++  K   +A   WTE+ G+H  TY+   +     E +L +    GS  +   R  + +VVQ  L   +PSSF+ + G    K + H+   L  +L +P     K  +  R    P+A+ P    P  E++E         FF  G+ ++ +
Sbjct:   16 FSNGDVLAGQVIVEVSKKTTIKSLTIKAKGKASVVWTETHGDHQVTYWDNEKYFSQTESILPKENKDGSFTLSGGRHTFAFVVQLPL-NDMPSSFKGESG----KVEYHLVAQLNRTLRVPCKAKTKFSFVSR----PDALLPVSMSPQYEVKEKD-----VTFFASGKISMNI 175          
The following BLAST results are available for this feature:
BLAST of EWM26911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585109041|gb|EWM26911.1|0.000e+0100.00Arrestin [Nannochloropsis gaditana][more]
gi|585106318|gb|EWM24759.1|3.794e-4651.79Arrestin-like protein [Nannochloropsis gaditana][more]
gi|646722531|gb|KDR23489.1|1.182e-924.51Arrestin domain-containing protein 2 [Zootermopsis... [more]
gi|1059411652|ref|XP_017778725.1|1.654e-925.52PREDICTED: arrestin domain-containing protein 17-l... [more]
gi|1059411654|ref|XP_017778726.1|1.776e-925.52PREDICTED: arrestin domain-containing protein 4-li... [more]
gi|985385871|ref|XP_015366545.1|6.746e-725.64PREDICTED: arrestin domain-containing protein 3-li... [more]
gi|1049290580|ref|XP_017542012.1|9.328e-726.44PREDICTED: arrestin domain-containing protein 3-li... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3789rna3789Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications