EWM26911.1, cds3780 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|585109041|gb|EWM26911.1| (Arrestin [Nannochloropsis gaditana]) HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0 Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query: 1 MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL 480
MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL
Sbjct: 1 MAVEAENVSITFTYTSIPHTLSARLAAVDQTNMYQSTSYATPVGVSHPEGQDGGSRYATPASSHTSFQGPITKAAASYDMPIAHAVAASSPPFSIQQIPLDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAKSACSHVPDLSVPITFVPSHPPSHSSGVSLSLATQPFLIQHERQRWL 480
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|585106318|gb|EWM24759.1| (Arrestin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 168.703 bits (426), Expect = 3.794e-46 Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 0
Query: 100 LDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPA 267
+ D AL +VA TK+GISLWL K FYPG+T+ GKMKA TS+ ++RA+K KL S A A W +G A+L LAPT+E LQE P + FVLE ++YEW V+ LP SLPSSF FKK T++ + THIA+ LTL +++P W D KL Y L+VH +P +ITP
Sbjct: 19 IQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPV 186
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|646722531|gb|KDR23489.1| (Arrestin domain-containing protein 2 [Zootermopsis nevadensis]) HSP 1 Score: 71.2478 bits (173), Expect = 1.182e-9 Identity = 87/355 (24.51%), Postives = 136/355 (38.31%), Query Frame = 0
Query: 120 PKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSG--------EHSSTYYAALEL----------APTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLE--------YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVLTGSRAFSTHEATRSYPFTVAEHLVASKVLPGTSLALHAVTTFPTLLLQWNPDFDIAFCRSRKPKKLNIVQMPSFVAGNVFQIKYHLELTAK-SACSHVPDLSVPI 447
P +Y G+TV G++ L S K+IR + K EA WTE+ E + Y+ E E+VL EG E+ + VLPP LPSSF + G HI + + + +D P+ D +++ L H T A P+MQ VE R CC G + L++P+T V D P+++ ++N S +TDV+ L + T AT Y + E L S+V+ + H+ T + + P D+ C + + Y+L++ A+ S C + S PI
Sbjct: 13 PTQTYYSGETVSGRVVLSLNSSKSIRGIVIKFKGEANVHWTENESRKNSDGTTEEHTVYFQGNEKYFESKYHLVGGRADEMVLPEG-------------EHCFPFSTVLPPKLPSSFEGEFG--------HIRYTVKVVVDRPWKFDHEIKSAFTVISPVDLNTHET--AKNPSMQE-VEKR------FCCLCCESGPLTMALSLPVT-------GYVPGQDIPVTIEIDNASNVCVTDVKCKL---------KKLITFIATSPYGSSREEELTVSEVIFDSVQPRHSNTATQKMTVPPLPPSDLDNCE-------------------IIDLAYYLKVVAEVSGCHNALKTSAPI 302
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1059411652|ref|XP_017778725.1| (PREDICTED: arrestin domain-containing protein 17-like isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 70.4774 bits (171), Expect = 1.654e-9 Identity = 61/239 (25.52%), Postives = 106/239 (44.35%), Query Frame = 0
Query: 113 SGISLWLPKTDFY--PGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSST---------YYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWP-DCKLE-YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALV 338
S ++L D Y G ++G + +S KT++ +K K +A W+E+ ++S+ +Y+A E E+ L V +R +++ F LP LPSSFR + G + +M+ S+ P++ D + E F V + P ++ PV + + + CC FF+KG ++ + IT F G V PI + VEN++ L V+ L+
Sbjct: 3 SKCDVYLENYDRYYCAGQQIVGHLLCTFSSDKTVKGIKIKFKGDASTRWSETERHYNSSTKRTESRTVWYSAEETYFVYEMNLLNNVSE----VTVKRGVHKYPFTFTLPLLLPSSFRGQHG--------KVKYMIKGSVKRPFFDFDYEAESEFTLVSPINLNLNPTLRVPVNFHKKKNL--CCMFFKKGAVTVEANIAIT--GFVAGQPV-----PIYLHVENLTNSNLDTVKFKLI 220
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1059411654|ref|XP_017778726.1| (PREDICTED: arrestin domain-containing protein 4-like isoform X2 [Nicrophorus vespilloides]) HSP 1 Score: 70.4774 bits (171), Expect = 1.776e-9 Identity = 61/239 (25.52%), Postives = 106/239 (44.35%), Query Frame = 0
Query: 113 SGISLWLPKTDFY--PGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSST---------YYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWP-DCKLE-YFLRVHCTPEAITPAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALV 338
S ++L D Y G ++G + +S KT++ +K K +A W+E+ ++S+ +Y+A E E+ L V +R +++ F LP LPSSFR + G + +M+ S+ P++ D + E F V + P ++ PV + + + CC FF+KG ++ + IT F G V PI + VEN++ L V+ L+
Sbjct: 3 SKCDVYLENYDRYYCAGQQIVGHLLCTFSSDKTVKGIKIKFKGDASTRWSETERHYNSSTKRTESRTVWYSAEETYFVYEMNLLNNVSE----VTVKRGVHKYPFTFTLPLLLPSSFRGQHG--------KVKYMIKGSVKRPFFDFDYEAESEFTLVSPINLNLNPTLRVPVNFHKKKNL--CCMFFKKGAVTVEANIAIT--GFVAGQPV-----PIYLHVENLTNSNLDTVKFKLI 220
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|985385871|ref|XP_015366545.1| (PREDICTED: arrestin domain-containing protein 3-like [Diuraphis noxia]) HSP 1 Score: 62.3882 bits (150), Expect = 6.746e-7 Identity = 60/234 (25.64%), Postives = 100/234 (42.74%), Query Frame = 0
Query: 120 PKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSG--------EHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAIT--PAMQRPVELRESRPISSCCCFFRKGEANLQLAVPITVLPFSDGSSVTPTDFPISVGVENVSKRTLTDVRLALVGEIVL 343
P F PG ++ G++ +S IR +K K EA SWTE E+ S Y A E ++ L G G LE + + LP LPS+F + G HI ++ +++DIP+ D + E +V +P + P++ P+ +E + CCC G L + LP+S V P++V ++N T+ V++ L +++
Sbjct: 13 PTAVFMPGQSLTGRVLVATSSSVKIRGIKLKFRGEAKVSWTEQESRRSDNGETENYSVKYDAEEEYFENKMTLVGG---GGESQLEAGEQV-YPFNISLPHQLPSTFNGEHG--------HIRYIAKVTIDIPWAKDKETEKTFQV-ISPLNLNDEPSLAEPI--KEEKEKFYCCCCCESGPTTL-----VVCLPYS--GFVPGQIIPLTVELDNNXNVTIEAVKIKLKRDLLF 224
BLAST of EWM26911.1 vs. NCBI_GenBank
Match: gi|1049290580|ref|XP_017542012.1| (PREDICTED: arrestin domain-containing protein 3-like [Pygocentrus nattereri]) HSP 1 Score: 61.2326 bits (147), Expect = 9.328e-7 Identity = 46/174 (26.44%), Postives = 81/174 (46.55%), Query Frame = 0
Query: 124 FYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPAMQRP-VELRESRPISSCCCFFRKGEANLQL 296
F GD + G++ +++ K TI+++ K +A WTE+ G+H TY+ + E +L + GS + R + +VVQ L +PSSF+ + G K + H+ L +L +P K + R P+A+ P P E++E FF G+ ++ +
Sbjct: 16 FSNGDVLAGQVIVEVSKKTTIKSLTIKAKGKASVVWTETHGDHQVTYWDNEKYFSQTESILPKENKDGSFTLSGGRHTFAFVVQLPL-NDMPSSFKGESG----KVEYHLVAQLNRTLRVPCKAKTKFSFVSR----PDALLPVSMSPQYEVKEKD-----VTFFASGKISMNI 175 The following BLAST results are available for this feature:
BLAST of EWM26911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|