EWM26893.1, cds3773 (CDS) Nannochloropsis gaditana

Overview
NameEWM26893.1
Unique Namecds3773
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:33824..34105 -
Alignment locationCM002462.1:33307..33679 -
Alignment locationCM002462.1:32341..33008 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26893.1
Productcellulase 2
Orig transcript idgnl|cribi|Naga_100103g7.7030.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:33824..34105 -
CM002462.1supercontigCM002462.1:33307..33679 -
CM002462.1supercontigCM002462.1:32341..33008 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
IPR013781Glyco_hydro_catalytic_dom
Homology
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|585109023|gb|EWM26893.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 912.524 bits (2357), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query:    1 MASISNLMRLATQGVLALLPTSSPEGSITDASLASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKCDPYNKKH 440
            MASISNLMRLATQGVLALLPTSSPEGSITDASLASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKCDPYNKKH
Sbjct:    1 MASISNLMRLATQGVLALLPTSSPEGSITDASLASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKCDPYNKKH 440          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|585108543|gb|EWM26490.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 363.999 bits (933), Expect = 5.452e-119
Identity = 198/453 (43.71%), Postives = 275/453 (60.71%), Query Frame = 0
Query:    1 MASISNLMRLATQGVLALLPTSSPEGSITDASLASATNSVTPLLRG---LAYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSI---------------EFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEG-DTFYLEPGEYANPKCD 434
            M +IS+++      V  LL T+SP  S  D ++    N + P LR    LA  S +  +  P DL    L WT    E+ +NG+ FHLKG+S+FG E  +  +  GL +   D+I  FL + +FNA+R+PFST  AL+ +  V     + +++ L+  + +   I++AA++ IL+MLD HRLN+  IPELWY  +Y+ +D+  AWD LL      WNLFAIDLKNEPHG ATWGSG A TDWNTAAE++  +L  KHP++KGLVFVEG   +                + E ++  PID G    N+RLVYSPH YGP      +F    NFP +    W++ W F+EE+T  A V+GEWGG+Y+    ++D +WQD FAK+LV++C+ D F W LNP SGDTGG+L  ++     KKLAL   VQPHP+++  +G D + + PG YANPKCD
Sbjct:    7 MDAISSVI------VTFLLLTASPSFSNADDTMGGLVN-MNPRLRATRQLAKASGSSKVSTPADLCVASLDWTSEGGEILLNGQPFHLKGVSYFGFETPNE-VPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAK-NFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYE----NQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQYCISPGAYANPKCD 446          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|585100881|gb|EWM20925.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 291.197 bits (744), Expect = 6.172e-91
Identity = 155/363 (42.70%), Postives = 217/363 (59.78%), Query Frame = 0
Query:   64 KEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNM--LLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR--GYFR-DGDINQLSRRQFLNKFIERAADFKILVMLDSHRLN-DQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVE------GLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL 414
            K  LTWT   + + VN + F +KG++WFG E  D  +  L G  ++ L + L  L  + FNAIR+PFS K AL  DT     G+ + D  ++ L+  Q ++K +E A    ++VMLD HRL+ D+ I +LWY + Y +  +L +WDI+L   K HWN+FA+DLKNEPHG  +WGSG A TDW  A+E+I +H+   HP+F+GL FV       G  +   F +++ HP+D G    N R+VY+PH YGP V    +F+ + +FP +  + W+  WGF+      A V+ EWGG    +   KD  WQ+R A+YL EK M+D F W LNP SGDTGG+L  +W    E+KL L   VQP PS L
Sbjct:   13 KGPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSW-SFPDNLPAVWDLHWGFLSGVLETAVVVSEWGG----FCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|585108749|gb|EWM26661.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 244.202 bits (622), Expect = 2.903e-72
Identity = 139/391 (35.55%), Postives = 210/391 (53.71%), Query Frame = 0
Query:   66 ELTWT-GTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWAL---DYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIK--------------THPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSE-----WERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKC 433
            +L W+ G + ++  N   F +KG+SWFG E G      GLN   +D IL F + + FN +R+P S  + L   D+    R  F    +   +  + L++ I++AA   ++VMLD H L  QE  +LWY ++Y + D+L AW  ++      WN+FA+DLKNEPHG ATWG     TD+N   E+   H+ T+ P +KGL  VEG+ Y+ E +K+                HPI    PE   R+VYSPH YGP    D++   Y+N PA++L+      W+   G++  K     ++GEWGG        +D + Q   AK+LV+ CM++   W +NPES DTGG++  NW   ++++L L D++ P P+    +     L  G Y NP+C
Sbjct:   74 DLAWSSGKDGQIYANTAPFFVKGISWFGCE-GHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFKPNQR--FVGKGLKGKTIWEILDEVIDQAALRGLMVMLDMHTLGPQEATDLWYDEQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQYNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGP----DVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGGSLKG----RDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQFGIKHSKLCLRFGTYPNPQC 453          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|470501173|ref|XP_004347125.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440800708|gb|ELR21743.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 243.432 bits (620), Expect = 2.890e-71
Identity = 147/379 (38.79%), Postives = 199/379 (52.51%), Query Frame = 0
Query:   48 AYPSFTKAMHGPIDLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGL-NNRGLDEILQFLVDNNFNAIRVPFSTKWAL-DYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHR-LNDQEIPE-LWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEK----------IKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPS 412
            A  S T             L +T     L +NG+ F LKG SWFG E G+  ++ GL  +R    +L FL  NNFNAIR+PF     L D       Y  + D+  LS  Q ++K ++ AA   +L+M D H  L D  I +  WY+    +  +++ W  LL   K  WN+FA D+KNEP+ AATWG+GN  TDWN A  +I   +       + L+FVEG+  S               ++THP+    P    +LVYSPH YGPSV G  +F+   NFPA+  + W+  +GFI   TG A V+GEWGG Y       + VW +    YL+ K M+DQF W LNP SGDTGG+L+ +W   E+ KL L   V P P+
Sbjct:   26 ALMSQTSTAQSATCYAPSALNFTSAQGALWLNGQPFKLKGTSWFGFETGN-KVVHGLWTSRSYLNLLDFLATNNFNAIRIPFYLDLVLNDAQPSSINYGANPDLQGLSSMQVMDKVVQAAAARGLLIMFDLHSFLPDTNIQDNTWYNGANPESKVISGWTKLLQRYKDQWNVFAADIKNEPY-AATWGTGNTGTDWNLAVARIADAIAASVSS-RFLIFVEGVASSPACTDACFWGENLIGVRTHPVQLRNPS---KLVYSPHVYGPSVYGQPYFS-VGNFPANMPAIWDTHFGFIPSTTGSAVVIGEWGGHY----TGSNQVWLEAMGNYLLSKRMTDQFFWCLNPNSGDTGGLLQNDWTTPEQSKLTLLAKVVPAPT 393          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|319655613|gb|ADV58313.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655635|gb|ADV58324.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655659|gb|ADV58336.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 237.654 bits (605), Expect = 8.236e-70
Identity = 136/360 (37.78%), Postives = 198/360 (55.00%), Query Frame = 0
Query:   76 LRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR-GYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQE-IPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKC 433
            + VNG+   LKG+++FG E  ++    G+ +  L+  L F+ +NNFNAIRVPFS +   +  + +      +  +   S  Q L+ FI+RAA+   L+MLD+HR+     I ELWY+ EY +                 WN+FAIDLKNEPH +A+WG+ NAATDWN AAE+I   L +    F GL FVEG+ +    E +   PI+ G P  N R+VYSPH YGPSV     F    +FP +    +   +GFI  +TG   V+GEWGG+ +     KDM W   + ++L  KC+++ F W LNP S DTGG+L+ +W     +K+ L +  QP+P+    +     +  G +    C
Sbjct:    1 ILVNGQPLVLKGINYFGFET-ETYTPHGIWSYDLNVYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLSS----FLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEF-NTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEV--GSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNGQICITAGAFPEAHC 345          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|319655603|gb|ADV58308.1| (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 233.802 bits (595), Expect = 1.225e-69
Identity = 136/365 (37.26%), Postives = 206/365 (56.44%), Query Frame = 0
Query:   69 WTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDG-DINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEI--PELWY--SQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSV--TGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPG 426
            WT  +  + VNG+   LKG+++FG E  ++    G+ +  L+++L F+ DNNFNAIRVPFS +   D    +  +  +  ++   S  + L+ FI+RAA+  +L++LD+HR        P LWY  S  Y +++++  W  L+   K+HWN+FAIDLKNEP  AATWG  N  TDWN AAE+    ++    EF G  FV G+ +   FE    +PI+ G+   NER+VYSPH YGP V    + H      +  +    +   +GF+ EK G+  V+GEWGGK  +    +D  W + F  ++ +KCM++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNHWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAEK-GYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|319655593|gb|ADV58303.1| (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 233.802 bits (595), Expect = 1.293e-69
Identity = 136/365 (37.26%), Postives = 206/365 (56.44%), Query Frame = 0
Query:   69 WTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDG-DINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEI--PELWY--SQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSV--TGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPG 426
            WT  +  + VNG+   LKG+++FG E  ++    G+ +  L+++L F+ DNNFNAIRVPFS +   D    +  +  +  ++   S  + L+ FI+RAA+  +L++LD+HR        P LWY  S  Y +++++  W  L+   K+HWN+FAIDLKNEP  AATWG  N  TDWN AAE+    ++    EF G  FV G+ +   FE    +PI+ G+   NER+VYSPH YGP V    + H      +  +    +   +GF+ EK G+  V+GEWGGK  +    +D  W + F  ++ +KCM++ F W LNP SG TGG+L+ +W    + KL L +  QP+P+   K  +   +  G
Sbjct:    2 WTTDDGRIMVNGQPLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPVIMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNHWNVFAIDLKNEPRDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRAHLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAEK-GYPVVIGEWGGK--AKPGTRDAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNEKICITKG 358          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|319655643|gb|ADV58328.1| (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 236.884 bits (603), Expect = 1.627e-69
Identity = 134/360 (37.22%), Postives = 199/360 (55.28%), Query Frame = 0
Query:   76 LRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR-GYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQE-IPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKC 433
            + VNG+   LKG+++FG E  ++    G+ +  L+  L F+ +NNFNAIRVPFS +   +  + +      +  +   +  Q L+ FI+RAA+  +L+MLD+HR+     I ELWY+ EY +                 WN+FAIDLKNEPH +A+WG+ NAATDWN AAE+I   L +    F GL FVEG+ +    E +   PI+ G P  N R+VYSPH YGPSV     F    +FP +    +   +GFI  +TG   V+GEWGG+ +     +DM W   + ++L  KC+++ F W LNP S DTGG+L+ +W     +K+ L +  QP+P+    +     +  G +    C
Sbjct:    1 IIVNGQPLVLKGINYFGFET-ETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLSS----FLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEF-NTPDFPNNLEGMYMVKYGFIVNQTGQPVVVGEWGGRAEV--GSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNGQICITAGAFPEAHC 345          
BLAST of EWM26893.1 vs. NCBI_GenBank
Match: gi|319655629|gb|ADV58321.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655639|gb|ADV58326.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655647|gb|ADV58330.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 236.884 bits (603), Expect = 1.716e-69
Identity = 134/360 (37.22%), Postives = 200/360 (55.56%), Query Frame = 0
Query:   76 LRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR-GYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQE-IPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDTFYLEPGEYANPKC 433
            + VNG+   LKG+++FG E  ++    G+ +  L+  L F+ +NNFNAIRVPFS +   +  + +      +  +   +  Q L+ FI+RAA+  +L+MLD+HR+     I ELWY+ +Y++                 WN+FAIDLKNEPH +A+WG+ NAATDWN AAE+I   L +    F GL FVEG+ +    E +   PI+ G P  N R+VYSPH YGPSV     F    +FP +    +   +GFI  +TG   V+GEWGG+ +     KDM W   + ++L  KC+++ F W LNP S DTGG+L+ +W     +K+ L +  QP+P+    +     +  G +    C
Sbjct:    1 ILVNGQPLVLKGINYFGFET-ETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNDYSESQKFT-------KTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLSS----FLGLFFVEGIEWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEF-NTPDFPNNVDGIYMVKYGFIVNQTGQPVVVGEWGGRAEV--GSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNGQICITAGAFPEAHC 345          
The following BLAST results are available for this feature:
BLAST of EWM26893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109023|gb|EWM26893.1|0.000e+0100.00cellulase 2 [Nannochloropsis gaditana][more]
gi|585108543|gb|EWM26490.1|5.452e-11943.71cellulase 2 [Nannochloropsis gaditana][more]
gi|585100881|gb|EWM20925.1|6.172e-9142.70cellulase 2 [Nannochloropsis gaditana][more]
gi|585108749|gb|EWM26661.1|2.903e-7235.55cellulase 2 [Nannochloropsis gaditana][more]
gi|470501173|ref|XP_004347125.1|2.890e-7138.79cellulase (glycosyl hydrolase family 5) subfamily ... [more]
gi|319655613|gb|ADV58313.1|8.236e-7037.78cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
gi|319655603|gb|ADV58308.1|1.225e-6937.26cellulase 1, partial [Pristionchus pacificus][more]
gi|319655593|gb|ADV58303.1|1.293e-6937.26cellulase 1, partial [Pristionchus pacificus][more]
gi|319655643|gb|ADV58328.1|1.627e-6937.22cellulase 2, partial [Pristionchus pacificus][more]
gi|319655629|gb|ADV58321.1|1.716e-6937.22cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3782rna3782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications