EWM26899.1, cds3770 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|585109029|gb|EWM26899.1| (YTH domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1244.57 bits (3219), Expect = 0.000e+0 Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0
Query: 1 MDIRGSTRRLFPDQDLPLIRLQDTTTISLLFLRASFSLPTAPHPYPPLSTEGGREEGGQLSDVPLEQEGGTLSYMWEHMSLDESGQPGPSPYTGYEHGIYPPTFPPSLPPAGPPPPASYLYYYDSPSPGAYGGMPMMYGLDTFSPYQDGYYYLPPSLLPSLPPSTLSPSYPPSSFPAYTPAAASSLPASPSPAGDRGYKGPYPSRRAEGREREGGGRRGGRGRGAAAMGKESIPATAGKEAEEEVMEARIETGVVQISQNDSKEEEPQGGVGFEGKDGEEDEEKEENREQEQEGPQDEEPEKEEEAWKTPPQVLPTGDPVQARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILDGQDILPASFQDHSSTISPAGAPVYAFAAAPHEAQYSSFPGQSFQVIPPQPIASTFHSPPTHGTSSVNGNGYFPTEYPSYQYGNGFSPRHVIVTGENHQPWSSQFSKQQDRTGRYEERGEGRGWGMGHRGNGGTHSNVGARSR 613
MDIRGSTRRLFPDQDLPLIRLQDTTTISLLFLRASFSLPTAPHPYPPLSTEGGREEGGQLSDVPLEQEGGTLSYMWEHMSLDESGQPGPSPYTGYEHGIYPPTFPPSLPPAGPPPPASYLYYYDSPSPGAYGGMPMMYGLDTFSPYQDGYYYLPPSLLPSLPPSTLSPSYPPSSFPAYTPAAASSLPASPSPAGDRGYKGPYPSRRAEGREREGGGRRGGRGRGAAAMGKESIPATAGKEAEEEVMEARIETGVVQISQNDSKEEEPQGGVGFEGKDGEEDEEKEENREQEQEGPQDEEPEKEEEAWKTPPQVLPTGDPVQARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILDGQDILPASFQDHSSTISPAGAPVYAFAAAPHEAQYSSFPGQSFQVIPPQPIASTFHSPPTHGTSSVNGNGYFPTEYPSYQYGNGFSPRHVIVTGENHQPWSSQFSKQQDRTGRYEERGEGRGWGMGHRGNGGTHSNVGARSR
Sbjct: 1 MDIRGSTRRLFPDQDLPLIRLQDTTTISLLFLRASFSLPTAPHPYPPLSTEGGREEGGQLSDVPLEQEGGTLSYMWEHMSLDESGQPGPSPYTGYEHGIYPPTFPPSLPPAGPPPPASYLYYYDSPSPGAYGGMPMMYGLDTFSPYQDGYYYLPPSLLPSLPPSTLSPSYPPSSFPAYTPAAASSLPASPSPAGDRGYKGPYPSRRAEGREREGGGRRGGRGRGAAAMGKESIPATAGKEAEEEVMEARIETGVVQISQNDSKEEEPQGGVGFEGKDGEEDEEKEENREQEQEGPQDEEPEKEEEAWKTPPQVLPTGDPVQARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILDGQDILPASFQDHSSTISPAGAPVYAFAAAPHEAQYSSFPGQSFQVIPPQPIASTFHSPPTHGTSSVNGNGYFPTEYPSYQYGNGFSPRHVIVTGENHQPWSSQFSKQQDRTGRYEERGEGRGWGMGHRGNGGTHSNVGARSR 613
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|332030573|gb|EGI70261.1| (YTH domain family protein 2 [Acromyrmex echinatior]) HSP 1 Score: 174.096 bits (440), Expect = 1.197e-46 Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = 0
Query: 308 KTPPQVLPTGDPVQ-------ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
+T QV +PV+ ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYREA+ +G P+YLFFSVN S FCG+A M SPVD+ ++ W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRD QEVP +G L+I++ + + +SI D
Sbjct: 7 QTGNQVKNDYNPVEFDQAAPGARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASREGAPLYLFFSVNGSGHFCGMAQMVSPVDYQSNSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVTNSRDAQEVPHAKGVTVLRILHTYRHSTSIFD 174
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|443701419|gb|ELT99900.1| (hypothetical protein CAPTEDRAFT_19575 [Capitella teleta]) HSP 1 Score: 170.244 bits (430), Expect = 4.533e-46 Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 0
Query: 319 PVQARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
P ARFF+IKS+S D+ +S+ +S+W STE GN RLD AYRE +G PV+LFFSVN S FCG+A M S VD+N S W + +W+G F V+W+ VKDVPN+ LRHI L NN+N+P SRDTQEVP +G + L+I++ + + +SI D
Sbjct: 3 PKGARFFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYREREGKG-PVFLFFSVNGSGHFCGMAQMMSAVDYNASSSVWAQD---KWKGQFEVKWIYVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKGKQVLRILHQYRHTTSIFD 151
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|307207777|gb|EFN85395.1| (YTH domain family protein 2 [Harpegnathos saltator]) HSP 1 Score: 172.555 bits (436), Expect = 2.320e-45 Identity = 79/150 (52.67%), Postives = 105/150 (70.00%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYREA+ +G P+YLFFSVN S FCG+A M SPVD+ + W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRD QEVP +G L+I++ + + +SI D
Sbjct: 84 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASREGAPLYLFFSVNGSGHFCGMAQMVSPVDYQCNSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVTNSRDAQEVPHVKGVTVLRILHTYRHSTSIFD 230
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|307165841|gb|EFN60204.1| (YTH domain family protein 2 [Camponotus floridanus]) HSP 1 Score: 174.481 bits (441), Expect = 6.080e-45 Identity = 79/150 (52.67%), Postives = 104/150 (69.33%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYREA +G P+YLFFSVN S FCG+A M SPVD+ + W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRD QEVP +G L+I++ + + +SI D
Sbjct: 186 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREANREGAPLYLFFSVNGSGHFCGMAQMVSPVDYQCNSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVTNSRDAQEVPHAKGVTVLRILHSYRHSTSIFD 332
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|751221309|ref|XP_011163831.1| (PREDICTED: YTH domain-containing family protein 3-like, partial [Solenopsis invicta]) HSP 1 Score: 172.555 bits (436), Expect = 9.179e-45 Identity = 79/150 (52.67%), Postives = 105/150 (70.00%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYREA+ +G P+YLFFSVN S FCG+A M SPVD+ + W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRD QEVP +G L+I++ + + +SI D
Sbjct: 127 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASREGAPLYLFFSVNGSGHFCGMAQMVSPVDYQCNSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVTNSRDAQEVPHAKGVTVLRILHTYRHTTSIFD 273
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|675860110|ref|XP_009015615.1| (hypothetical protein HELRODRAFT_152141, partial [Helobdella robusta] >gi|555703014|gb|ESO06247.1| hypothetical protein HELRODRAFT_152141, partial [Helobdella robusta]) HSP 1 Score: 165.622 bits (418), Expect = 1.123e-44 Identity = 78/149 (52.35%), Postives = 109/149 (73.15%), Query Frame = 0
Query: 323 RFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQGIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
RFFVIKSFS D+ +S+ +S+W STE GN RLD AYRE +G V+L+FSVN S FCGVA M+SP+D+++S W + ++W+G F V+W+ VKDVPN+ LRHI L NN+N+P SRDTQEVP+ +G + L+I++ + + +SI D
Sbjct: 1 RFFVIKSFSEDDIHRSIKYSIWCSTEYGNKRLDAAYREREGKG-QVFLYFSVNGSGHFCGVAQMTSPIDYSSSSEVWAQ---NKWKGQFTVKWIYVKDVPNSQLRHIKLENNENKPVTNSRDTQEVPYEKGKQVLRIIHQYRHTTSIFD 145
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|939664758|ref|XP_014279834.1| (PREDICTED: YTH domain-containing family protein 3 isoform X3 [Halyomorpha halys]) HSP 1 Score: 175.252 bits (443), Expect = 2.089e-44 Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQ--GIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYRE + G+ VYLFFSVN S FCG+A M+SPVD+N S W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRDTQEVPF +G + L++M+ + + +SI D
Sbjct: 306 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREQESKPNGV-VYLFFSVNGSGHFCGMARMTSPVDYNASSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVTNSRDTQEVPFEKGKQVLRVMHSYRHTTSIFD 453
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|939664752|ref|XP_014279832.1| (PREDICTED: YTH domain-containing family protein 3 isoform X1 [Halyomorpha halys]) HSP 1 Score: 176.022 bits (445), Expect = 3.013e-44 Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQ--GIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYRE + G+ VYLFFSVN S FCG+A M+SPVD+N S W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRDTQEVPF +G + L++M+ + + +SI D
Sbjct: 355 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREQESKPNGV-VYLFFSVNGSGHFCGMARMTSPVDYNASSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVTNSRDTQEVPFEKGKQVLRVMHSYRHTTSIFD 502
BLAST of EWM26899.1 vs. NCBI_GenBank
Match: gi|939664754|ref|XP_014279833.1| (PREDICTED: YTH domain-containing family protein 3 isoform X2 [Halyomorpha halys]) HSP 1 Score: 175.637 bits (444), Expect = 3.498e-44 Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 0
Query: 322 ARFFVIKSFSPTDVVQSVHHSLWASTEPGNARLDRAYREAAVQ--GIPVYLFFSVNESRRFCGVALMSSPVDFNTSFPAWMKTQTHRWRGVFNVRWLLVKDVPNAALRHITLANNQNRPFPRSRDTQEVPFNEGNEALQIMNDHAYYSSILD 471
ARFFVIKS+S D+ +S+ + +W STE GN RLD+AYRE + G+ VYLFFSVN S FCG+A M+SPVD+N S W + +W+G F VRW+ VKDVPN LRHI L NN+N+P SRDTQEVPF +G + L++M+ + + +SI D
Sbjct: 355 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREQESKPNGV-VYLFFSVNGSGHFCGMARMTSPVDYNASSSVWSQD---KWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVTNSRDTQEVPFEKGKQVLRVMHSYRHTTSIFD 502 The following BLAST results are available for this feature:
BLAST of EWM26899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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