EWM26903.1, cds3768 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|585109033|gb|EWM26903.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 775.778 bits (2002), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0 Query: 1 MYPPLTGNFMRSRDSILPPLSSLTDSEINADMSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFRPWGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR 379 MYPPLTGNFMRSRDSILPPLSSLTDSEINADMSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFRPWGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR Sbjct: 1 MYPPLTGNFMRSRDSILPPLSSLTDSEINADMSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFRPWGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR 379
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|553181303|ref|XP_005853541.1| (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >gi|422295521|gb|EKU22820.1| hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0 Identity = 347/411 (84.43%), Postives = 347/411 (84.43%), Query Frame = 0 Query: 32 MSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFRPWGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSIL-----------------------------------VHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE----------------------------GGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR 379 MSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFR WGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSIL VHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE GGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR Sbjct: 1 MSESKVFEGEGGSNEGLPVNEDSKNKGGRKKTEKKHKDVQQEDLEKGEDRRDSKEDTKLYNLTEKGTSCVSPSTPTCRRFRLWGRLKAHSWPAMLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFRRMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEKSFGLSFRIDGEGRRVDVRFSYLSHPSQGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDILLSDCYGRFTR 411
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|585109034|gb|EWM26904.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 380.948 bits (977), Expect = 3.441e-130 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 Query: 125 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 315 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE Sbjct: 1 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|553181298|ref|XP_005853540.1| (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >gi|422295520|gb|EKU22819.1| hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.443 bits (376), Expect = 1.386e-38 Identity = 91/234 (38.89%), Postives = 143/234 (61.11%), Query Frame = 0 Query: 151 VEEKEGTE-EPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDIL-LSDCYGRFTR 379 V +G + +P I L+SS+HS V ++V + ++L+ MPKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+GG AVL G YT + +++TV LG + R + +ECTVL+ WG++ L LSDCYGRF + Sbjct: 74 VSSHDGEDLKPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEGQNCLLYTTSTSKITVKGLGLIPTSRNFKVECTVLRKWGENPLTLSDCYGRFYK 307
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|585112577|gb|EWM29974.1| (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 109.383 bits (272), Expect = 2.147e-23 Identity = 75/228 (32.89%), Postives = 121/228 (53.07%), Query Frame = 0 Query: 164 SPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLP--LPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPG----SLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWG--------KDILLSDCYGRF 377 +PS S S+HS ++ I + L+ +P+WKYR + +S+++ +I LLL VS+VYGFG+ H+ V + P + +G+ P+R+ + ++NPN F I +++ V S+ R+ G + L + +P LHAR + FV+ L + G + AVL G TF A L V +LGF+ I R + ++C+V WG KD +SDC+G F Sbjct: 108 APSFSTTQSVHS----VMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEV-VLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDT-VSDCFGAF 329
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|585109030|gb|EWM26900.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 100.138 bits (248), Expect = 3.466e-20 Identity = 65/170 (38.24%), Postives = 104/170 (61.18%), Query Frame = 0 Query: 159 EPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVL 325 +P I L+SS+HS V ++V + ++L+ MPKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+GG AVL Sbjct: 83 KPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVL 252
BLAST of EWM26903.1 vs. NCBI_GenBank
Match: gi|585109031|gb|EWM26901.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 85.5001 bits (210), Expect = 1.047e-15 Identity = 54/140 (38.57%), Postives = 85/140 (60.71%), Query Frame = 0 Query: 189 YQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVL 325 + PKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+GG AVL Sbjct: 21 FHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVL 160 The following BLAST results are available for this feature:
BLAST of EWM26903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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