EWM26896.1, cds3762 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|585109026|gb|EWM26896.1| (mitochondrial substrate carrier family protein b [Nannochloropsis gaditana]) HSP 1 Score: 419.083 bits (1076), Expect = 4.063e-148 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query: 1 MLAGGLAGVAANLLFHPLDTLRARITAQTASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPLALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAVREGGGLRGLYRGYPVVLLKVLPTTVVSYRVSSGVTQWLEESA 210
MLAGGLAGVAANLLFHPLDTLRARITAQTASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPLALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAVREGGGLRGLYRGYPVVLLKVLPTTVVSYRVSSGVTQWLEESA
Sbjct: 1 MLAGGLAGVAANLLFHPLDTLRARITAQTASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPLALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAVREGGGLRGLYRGYPVVLLKVLPTTVVSYRVSSGVTQWLEESA 210
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|953493856|emb|CEG44240.1| (mitochondrial carrier family [Plasmopara halstedii]) HSP 1 Score: 120.939 bits (302), Expect = 3.695e-28 Identity = 76/203 (37.44%), Postives = 109/203 (53.69%), Query Frame = 0
Query: 1 MLAGGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPLALHRH-RHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMA-VREGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
+ GG AG+ N L +PLD +R R+TAQ ++RPY G+ I EG R F+RG P ++ F YIG NY L P+ +H +S+ L P+ P IL A V+Q I+YPFD++RRR+QL +G K + F+S W + + V EGG LRG LYRG+ + ++K LP+TV+S+
Sbjct: 414 FVMGGFAGLTLNCLLYPLDVIRGRLTAQEYYNANRPYT-GILHCARSIRDHEGLRGFYRGFGPASLGVFTYIGCNYALYESLRPVFVHYDVEDTSIQLGHPSVP----------GQILCATTASLVSQCISYPFDVIRRRIQL---QGTKWHPELAFSSYKGAWHCVRASVVDEGGALRGMRSLYRGFVINVVKALPSTVISF 602
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|953486711|emb|CEG48773.1| (mitochondrial carrier family [Plasmopara halstedii]) HSP 1 Score: 120.553 bits (301), Expect = 6.606e-28 Identity = 76/203 (37.44%), Postives = 109/203 (53.69%), Query Frame = 0
Query: 1 MLAGGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPLALHRH-RHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMA-VREGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
+ GG AG+ N L +PLD +R R+TAQ ++RPY G+ I EG R F+RG P ++ F YIG NY L P+ +H +S+ L P+ P IL A V+Q I+YPFD++RRR+QL +G K + F+S W + + V EGG LRG LYRG+ + ++K LP+TV+S+
Sbjct: 1034 FVMGGFAGLTLNCLLYPLDVIRGRLTAQEYYNANRPYT-GILHCARSIRDHEGLRGFYRGFGPASLGVFTYIGCNYALYESLRPVFVHYDVEDTSIQLGHPSVP----------GQILCATTASLVSQCISYPFDVIRRRIQL---QGTKWHPELAFSSYKGAWHCVRASVVDEGGALRGMRSLYRGFVINVVKALPSTVISF 1222
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|301107492|ref|XP_002902828.1| (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >gi|262097946|gb|EEY55998.1| Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4]) HSP 1 Score: 111.694 bits (278), Expect = 9.479e-25 Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMA-VREGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG P ++ F YIG N+ L P+ L+ +S L P+ P I+ A +Q I+YPFD++RRR+QL +G K + F + S W + + V EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 1083 GGLAGLTLNSLFYPLDVIRGRLTVQQYYNANRP-SSGILNCARSIRDKEGLRGFYRGFVPASLGVFTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQIMCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYESAWHCVRASVVEEGGGIRGLRSLYRGLFVNAVKALPSTVISF 1268
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|568003964|gb|ETL78301.1| (hypothetical protein L917_20856 [Phytophthora parasitica] >gi|568033870|gb|ETM31562.1| hypothetical protein L914_20869 [Phytophthora parasitica]) HSP 1 Score: 109.383 bits (272), Expect = 5.299e-24 Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAV-REGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG ++ F YIG N+ L P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + S W + +V EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 1088 GGLAGLTLNCLFYPLDVIRGRLTVQQYYNANRP-SSGILNCARSISDKEGLRGFYRGFVSASLGVFTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYESAWHCVRASVAEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1273
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|675179441|ref|XP_008898605.1| (hypothetical protein PPTG_06437 [Phytophthora parasitica INRA-310] >gi|568101574|gb|ETN16260.1| hypothetical protein PPTG_06437 [Phytophthora parasitica INRA-310] >gi|570966092|gb|ETP29211.1| hypothetical protein F442_21584 [Phytophthora parasitica P10297] >gi|970627888|gb|KUF75697.1| Calcium-binding mitochondrial carrier protein SCaMC-1 [Phytophthora nicotianae] >gi|970662205|gb|KUF99614.1| hypothetical protein AM588_10009862 [Phytophthora nicotianae]) HSP 1 Score: 109.383 bits (272), Expect = 5.507e-24 Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAV-REGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG ++ F YIG N+ L P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + S W + +V EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 1088 GGLAGLTLNCLFYPLDVIRGRLTVQQYYNANRP-SSGILNCARSISDKEGLRGFYRGFVSASLGVFTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYESAWHCVRASVAEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1273
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|566008324|gb|ETI31235.1| (hypothetical protein F443_21723 [Phytophthora parasitica P1569] >gi|567945838|gb|ETK71649.1| hypothetical protein L915_21123 [Phytophthora parasitica] >gi|570312019|gb|ETO59967.1| hypothetical protein F444_21752 [Phytophthora parasitica P1976]) HSP 1 Score: 109.383 bits (272), Expect = 5.668e-24 Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAV-REGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG ++ F YIG N+ L P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + S W + +V EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 1088 GGLAGLTLNCLFYPLDVIRGRLTVQQYYNANRP-SSGILNCARSISDKEGLRGFYRGFVSASLGVFTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYESAWHCVRASVAEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1273
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|567974520|gb|ETL25111.1| (hypothetical protein L916_20999 [Phytophthora parasitica] >gi|570935809|gb|ETP01066.1| hypothetical protein F441_21610 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 109.383 bits (272), Expect = 5.890e-24 Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAV-REGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG ++ F YIG N+ L P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + S W + +V EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 1088 GGLAGLTLNCLFYPLDVIRGRLTVQQYYNANRP-SSGILNCARSISDKEGLRGFYRGFVSASLGVFTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYESAWHCVRASVAEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1273
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|695443390|ref|XP_009533690.1| (hypothetical protein PHYSODRAFT_337707 [Phytophthora sojae] >gi|348671124|gb|EGZ10945.1| hypothetical protein PHYSODRAFT_337707 [Phytophthora sojae]) HSP 1 Score: 107.071 bits (266), Expect = 3.048e-23 Identity = 71/200 (35.50%), Postives = 102/200 (51.00%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAVREGG----GLRGLYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ I EG R F+RG P ++ F YIG N+ P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + W + +++E G GLR LYRG V +K LP+TV+S+
Sbjct: 1091 GGLAGLTLNSLFYPLDVVRGRLTVQQYYNANRP-STGILDCARSIRDKEGLRGFYRGFVPASLGVFTYIGCNFALYESFRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLGSQCISYPFDVIRRRVQL---QGAKWHPELAFPTYEGAWDCVRSSIQEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1276
BLAST of EWM26896.1 vs. NCBI_GenBank
Match: gi|1214708962|gb|OWZ20188.1| (Mitochondrial Carrier (MC) protein [Phytophthora megakarya]) HSP 1 Score: 105.531 bits (262), Expect = 1.244e-22 Identity = 72/200 (36.00%), Postives = 105/200 (52.50%), Query Frame = 0
Query: 4 GGLAGVAANLLFHPLDTLRARITAQT--ASSRPYPEGVWQATLHIWKLEGPRAFWRGATPCAVWAFLYIGINYTCLAFLAPL-ALHRHRHSSLPLARPTDPLSAPSSPPPSSAILSVLAAGAVAQSIAYPFDLLRRRMQLGWGEGLKLERKGIFTSLSSLWGQAQMAV-REGGGLRG---LYRGYPVVLLKVLPTTVVSY 196
GGLAG+ N LF+PLD +R R+T Q ++RP G+ + I EG + F+RG P ++ YIG N+ L P+ L+ +S L P+ P IL A +Q I+YPFD++RRR+QL +G K + F + S W + ++ EGGG+RG LYRG V +K LP+TV+S+
Sbjct: 874 GGLAGLTLNCLFYPLDVIRGRLTVQQYYNANRP-SSGMLKCARLIRDKEGFQGFYRGFMPASLGVSTYIGCNFALYESLRPVFVLYDTEDTSNQLGHPSVP----------GQILCATTASLASQCISYPFDVIRRRVQL---QGAKWHPELAFPTYDSAWDCVRSSIAEEGGGVRGLRSLYRGLFVNAVKALPSTVISF 1059 The following BLAST results are available for this feature:
BLAST of EWM26896.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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