EWM26910.1, cds3761 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26910.1 vs. NCBI_GenBank
Match: gi|585109040|gb|EWM26910.1| (hypothetical protein Naga_100103g17 [Nannochloropsis gaditana]) HSP 1 Score: 1550.03 bits (4012), Expect = 0.000e+0 Identity = 770/770 (100.00%), Postives = 770/770 (100.00%), Query Frame = 0
Query: 1 MPRCYLSFLPSDASENITSFLMLNDILAFSLCSSLFLTENRLDRKNLTVTWRQSRRVDSGDDKLVLSSFVSLLRRQRSLEKLVFRIEQNLPSEIPFSKFSGHVTHTVMAGSCIPDEDSMNKIAQMIHQPPLHVISVLRSNLEKLSIPVLPNLSSLHVEPAPPTALWETSEPFSGDPFFSAPLSSPSTSSPSLAKIITAHILGCFLNARGGPCRTPSLRTLRLHTRDLLDDDGLDFLTAEFEMQGRKEQKGCPDYSSCHLSPYLSPPLMACKPRIESSEDSLRPLQLAALVLDAPRAGRGRPLSRFLLSGPFHALHHLTLRHVNCLSTAAIQRFLTESSALRLETLTLHRSEGQLAWADPVAEALALPSVAPRLRILETAFLPFSAKAAEALISRRICNYPASPNAPASSFPCDTSPDVQDAPDPTSFSASAPLHVSPAPMTSLRLWAAGLNYGDMCKLLGVPSSEPVIPPSLGLSASHLQDLRVLCLNFHRSDALLFALPAALAAGAAPGLEELILVHCRLDDRFALTLASVLEAGDPHGAASAIVSSSGQLLEYNAFSSDGDPSEAANAYPLRKGASCARTMRVLDLAYNRLEAAGFKALLNFAALSPTCVLERLRLDGNPLGGIQGVLAWSQSFLSSPNAAKASLRRLETLELRRVRLWETSDIFLAQNDVLSVVQTFMHPEKAPALRRLVFGVEATRGMNVEGQDARGTGGYLPPGTLARIWALLVTYKRRREDDLCENGTKEITSTTSRMLEVTAEGGSPFMGLEN 770
MPRCYLSFLPSDASENITSFLMLNDILAFSLCSSLFLTENRLDRKNLTVTWRQSRRVDSGDDKLVLSSFVSLLRRQRSLEKLVFRIEQNLPSEIPFSKFSGHVTHTVMAGSCIPDEDSMNKIAQMIHQPPLHVISVLRSNLEKLSIPVLPNLSSLHVEPAPPTALWETSEPFSGDPFFSAPLSSPSTSSPSLAKIITAHILGCFLNARGGPCRTPSLRTLRLHTRDLLDDDGLDFLTAEFEMQGRKEQKGCPDYSSCHLSPYLSPPLMACKPRIESSEDSLRPLQLAALVLDAPRAGRGRPLSRFLLSGPFHALHHLTLRHVNCLSTAAIQRFLTESSALRLETLTLHRSEGQLAWADPVAEALALPSVAPRLRILETAFLPFSAKAAEALISRRICNYPASPNAPASSFPCDTSPDVQDAPDPTSFSASAPLHVSPAPMTSLRLWAAGLNYGDMCKLLGVPSSEPVIPPSLGLSASHLQDLRVLCLNFHRSDALLFALPAALAAGAAPGLEELILVHCRLDDRFALTLASVLEAGDPHGAASAIVSSSGQLLEYNAFSSDGDPSEAANAYPLRKGASCARTMRVLDLAYNRLEAAGFKALLNFAALSPTCVLERLRLDGNPLGGIQGVLAWSQSFLSSPNAAKASLRRLETLELRRVRLWETSDIFLAQNDVLSVVQTFMHPEKAPALRRLVFGVEATRGMNVEGQDARGTGGYLPPGTLARIWALLVTYKRRREDDLCENGTKEITSTTSRMLEVTAEGGSPFMGLEN
Sbjct: 1 MPRCYLSFLPSDASENITSFLMLNDILAFSLCSSLFLTENRLDRKNLTVTWRQSRRVDSGDDKLVLSSFVSLLRRQRSLEKLVFRIEQNLPSEIPFSKFSGHVTHTVMAGSCIPDEDSMNKIAQMIHQPPLHVISVLRSNLEKLSIPVLPNLSSLHVEPAPPTALWETSEPFSGDPFFSAPLSSPSTSSPSLAKIITAHILGCFLNARGGPCRTPSLRTLRLHTRDLLDDDGLDFLTAEFEMQGRKEQKGCPDYSSCHLSPYLSPPLMACKPRIESSEDSLRPLQLAALVLDAPRAGRGRPLSRFLLSGPFHALHHLTLRHVNCLSTAAIQRFLTESSALRLETLTLHRSEGQLAWADPVAEALALPSVAPRLRILETAFLPFSAKAAEALISRRICNYPASPNAPASSFPCDTSPDVQDAPDPTSFSASAPLHVSPAPMTSLRLWAAGLNYGDMCKLLGVPSSEPVIPPSLGLSASHLQDLRVLCLNFHRSDALLFALPAALAAGAAPGLEELILVHCRLDDRFALTLASVLEAGDPHGAASAIVSSSGQLLEYNAFSSDGDPSEAANAYPLRKGASCARTMRVLDLAYNRLEAAGFKALLNFAALSPTCVLERLRLDGNPLGGIQGVLAWSQSFLSSPNAAKASLRRLETLELRRVRLWETSDIFLAQNDVLSVVQTFMHPEKAPALRRLVFGVEATRGMNVEGQDARGTGGYLPPGTLARIWALLVTYKRRREDDLCENGTKEITSTTSRMLEVTAEGGSPFMGLEN 770
BLAST of EWM26910.1 vs. NCBI_GenBank
Match: gi|585101313|gb|EWM21212.1| (hypothetical protein Naga_100429g2 [Nannochloropsis gaditana]) HSP 1 Score: 88.1965 bits (217), Expect = 1.114e-15 Identity = 61/141 (43.26%), Postives = 70/141 (49.65%), Query Frame = 0
Query: 211 PCRTPSLRTLRLHTRDLLDDDGLDFLTAEFEMQGRKEQKGCPDYSSCHLSPYLSPPLMACKPRIESSEDSLRPLQLAALVLDAPRAGRGRPLSRFLLSGPFHALHHLTLRHVNCLSTAAIQRFLTESSALRLETLTLHRSE 351
PC TP+L LRLH R LLD + LDF+T + E Q E+KG + + CHL L PPL ACKP IESS LR HLT R NCLS QRFLTESSAL+LE RS+
Sbjct: 120 PCLTPNLGKLRLHRRGLLDVNSLDFVTVKLEKQ---ERKG--NNNGCHLISSL-PPLKACKPLIESSRVPLR---------------------------------HLTPRQANCLSITTTQRFLTESSALQLEATGRQRSQ 221 The following BLAST results are available for this feature:
BLAST of EWM26910.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|