EWM26918.1, cds3754 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|585109050|gb|EWM26918.1| (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1030.39 bits (2663), Expect = 0.000e+0 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query: 1 MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGGGGGVDSKGVLRVGVGSGGSSGGREGGRGVNSRAWSPYSYQKGRNETESGSMLDRLFFR 501
MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGGGGGVDSKGVLRVGVGSGGSSGGREGGRGVNSRAWSPYSYQKGRNETESGSMLDRLFFR
Sbjct: 1 MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGGGGGVDSKGVLRVGVGSGGSSGGREGGRGVNSRAWSPYSYQKGRNETESGSMLDRLFFR 501
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|553191672|ref|XP_005855430.1| (hypothetical protein NGA_0121600 [Nannochloropsis gaditana CCMP526] >gi|422293637|gb|EKU20937.1| hypothetical protein NGA_0121600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
Query: 1 MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFK 293
MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFK
Sbjct: 1 MAPALELHQAHRMYRNQGKRDSEAYPPSSRELVLKLQGEGSISSPIPSSVPRRACTGCAHSCLSRQRHYREALLKKAAQPLGCVCKSDTLCHKRSKSSMNSSARAAPSVFFAAAATFVCCCSLASATYTSESSSFFYPSLPSSALAAFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFK 293
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|873218209|emb|CEM39765.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 218.394 bits (555), Expect = 1.965e-62 Identity = 124/293 (42.32%), Postives = 172/293 (58.70%), Query Frame = 0
Query: 163 RVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKE----VRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRM---RTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQAR------------MTVAQDWMSDETLGAYI 436
RVL + +P++ SV R ++ + + FR R + E+ V VNIE P+ANVRRIS S++V+ + D W ILTDY+NL+ +VPNL S+ V P + G N + +RL+QEGAQ I+GF+F+A++TMDM EV + ++ R I+F+L DS FS F GEW++Q ++R A ++E +Y+TKLFY+V V+PKGPVPV ALEWRIKEDVPTNL+AVK A+EK+ L G + R V Q DETLG Y+
Sbjct: 102 RVLRAPLAPASVGPSVDEEMG----RGDAVRLGLTTFRRRAMLDT-EDSVSVNIERPAANVRRISGSVIVDTSMEDCWSILTDYDNLAAHVPNLVVSQRVPLPRSLASSGLNGDDMWQMRLYQEGAQKIIGFDFRAAVTMDMREVLGDPENRMAPRLIEFKLADSQFFSQFDGEWKIQAHTRRVRRHPATGDDEISYTTKLFYVVTVRPKGPVPVMALEWRIKEDVPTNLKAVKQAAEKIARKVPASSPLLLRADEGETQTWRREGEGEGEDDDDMDEVDQGVQEDETLGVYM 389
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|298715255|emb|CBJ27904.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 198.749 bits (504), Expect = 1.485e-56 Identity = 98/185 (52.97%), Postives = 129/185 (69.73%), Query Frame = 0
Query: 201 WRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMR-TACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTN 384
W GG+ EV VNIE S N RRIS SIVVNRP+ DVW LTDY+ L++YVPNLTQS++ + G +RL+QEGAQ IVGF+F+AS+ M MEE F + ++ QR++ F L+DS MF++F GEWR+Q SR + + E+ Y+TKLFYMV+++PKGPVPV ALEW+I +VP N
Sbjct: 3 WSGGRRTQGNEVTVNIERTSRNSRRISGSIVVNRPIEDVWLTLTDYDRLAKYVPNLTQSKVRPSNDG--------GIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQFNTAQGPEYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNN 179
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|922856801|gb|KOO25119.1| (cyclase dehydrase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 193.741 bits (491), Expect = 1.137e-55 Identity = 102/184 (55.43%), Postives = 127/184 (69.02%), Query Frame = 0
Query: 212 VLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 395
V+V+I + N R IS+S++ + S VW ILTDY+NL+ +VPNL QSR P G +RLFQEGAQ IVGF+F+ASLTMDM EV E+ L RI F LV+SAMF+ F GEWR+Q YSR+R+ + ++ Y +KL Y VN+ PKG VPV ALEWRI+EDVP NL AVK ASEKL
Sbjct: 16 VVVDILTTGINSRCISASVIADAAPSKVWAILTDYDNLATHVPNLIQSRRRPHPTG--------GIRLFQEGAQKIVGFDFRASLTMDMTEV--TEEGALRPSRILFELVESAMFASFDGEWRVQPYSRVRSLADPSKYEYKSKLSYRVNITPKGLVPVPALEWRIREDVPVNLLAVKAASEKL 189
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|553191675|ref|XP_005855431.1| (hypothetical protein NGA_0121700 [Nannochloropsis gaditana CCMP526] >gi|422293638|gb|EKU20938.1| hypothetical protein NGA_0121700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 189.504 bits (480), Expect = 4.925e-55 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 354 TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGG 443
TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGG
Sbjct: 5 TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGG 94
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|1210519789|dbj|GAX21341.1| (hypothetical protein FisN_6Lh094 [Fistulifera solaris]) HSP 1 Score: 175.637 bits (444), Expect = 1.573e-47 Identity = 107/237 (45.15%), Postives = 142/237 (59.92%), Query Frame = 0
Query: 212 VLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVK----VASEKLPWDCEQDQAALAALAAGRREQQAR------MTVAQDWMSDETLGAYIGD 438
V V IE PS + RRI I+ PL+DVW ILT Y++LS +VPNL +SR+ PP + + E LFQ+GAQ IVGF F AS+TM M+E + +E E RRI F+ VDS F+ F GEW+ + R+ E TKL Y+V+V+PKGPVPV ALEWRI+EDVPTNLRAVK + SEK +Q + +A + +R R M ++ W DET+ AY+ +
Sbjct: 68 VPVRIERPSPSSRRIFGEIIAPVPLADVWSILTAYDDLSTHVPNLKESRITRRPPSGQPGDGSYECILFQKGAQKIVGFEFAASVTMKMKERYISESE----RRITFQCVDSMFFNAFDGEWKAE--ERIGADGMPE-----TKLSYVVDVRPKGPVPVAALEWRIREDVPTNLRAVKRSAALLSEKS--QVQQTLSRPSAPSVNKRATSTRAQLMNNMKMSVKWYKDETMEAYLTE 291
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|1210515156|dbj|GAX25868.1| (hypothetical protein FisN_6Hh094 [Fistulifera solaris]) HSP 1 Score: 171.4 bits (433), Expect = 6.095e-46 Identity = 102/236 (43.22%), Postives = 137/236 (58.05%), Query Frame = 0
Query: 212 VLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQA---------RMTVAQDWMSDETLGAYIGD 438
V V IE PS + RRI I+ PL+DVW ILT Y++LS +VPNL +SR+ PP + + E LFQ+GAQ IVGF F AS+TM M+E + + E R+I F+ VDS F+ F GEW+ + R + + TKL Y+V+V+PKGPVPV ALEWRI+EDVPTNLRAVK ++ L + Q A Q+A M ++ W DET+ AY+ +
Sbjct: 68 VPVRIERPSPSSRRIFGEIIAPVPLADVWSILTAYDDLSTHVPNLKESRITRRPPSGQPGDGSFECILFQKGAQKIVGFEFAASVTMKMKESYISASE----RKITFQCVDSMFFNAFDGEWK----AEERVSADGMP---ETKLSYVVDVRPKGPVPVAALEWRIREDVPTNLRAVKRSAALLSEQSQMPQTRSRPSAPSVNNQRASSTRARLMNDMKMSVKWYKDETMEAYLTE 292
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|219122765|ref|XP_002181710.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406986|gb|EEC46924.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 169.474 bits (428), Expect = 8.627e-45 Identity = 118/316 (37.34%), Postives = 156/316 (49.37%), Query Frame = 0
Query: 147 AFLPSSLPPAAPRRRRRVLSSSSSPSAFSNSVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKL------------------GQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWD----CEQDQAALAALAAGRREQQARMTVAQD----WMSDETLGAYI 436
AFL L +A R R S+ SP++ + F A S++T ++ E V V IE S N R+I IV PL DVW ILTDY+ LS +VPNL +SR+V G E N + RLFQ+GAQ IVGF F A LTM+M+E + L +RRI+F+ +S F +F GEW++ T E T L Y V+V+P GPVPV ALEWRI+EDVPTNLRAVK+A+ + + Q A+ R AR + D W +ET+ AY+
Sbjct: 27 AFLTGGLQSSAIRHSRLDRSAFYSPTSLNIWWFG--GAESEQTAQ-------------GDDSCELVPVRIERTSGNSRKIYGEIVAPVPLKDVWAILTDYDRLSTHVPNLVESRIVRPLSGGEMGDGNFQCRLFQKGAQKIVGFEFGADLTMEMKESIKPAPTILPSKPDATRQDANGASYPGNERRIQFKCCESFFFKEFDGEWKV-------TERTGETGLMETVLSYTVDVRPNGPVPVAALEWRIREDVPTNLRAVKLAAMTVGYKGVQASRQQGMQPASFGKSYRRNGARPGLIADLRVQWEPEETMAAYL 320
BLAST of EWM26918.1 vs. NCBI_GenBank
Match: gi|397615186|gb|EJK63276.1| (hypothetical protein THAOC_16079 [Thalassiosira oceanica]) HSP 1 Score: 169.859 bits (429), Expect = 8.637e-45 Identity = 111/251 (44.22%), Postives = 139/251 (55.38%), Query Frame = 0
Query: 212 VLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEE-VFEA---------EDEKL--GQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQ-------AALAALAAGRREQQARMTVAQDWMSD-------ETLGAYI 436
V V I+ SAN RRI IVVN L DVW ILTDY+ LS +VPNL S+ V+ G G K RL+Q GAQ I+GF F A +TMDM E V +A D KL +RRI F+ VDS FS+F G WR+ E E T + Y V V+PKGPVPV ALEWRI+EDVPTNLRAVK A+ ++ ++ Q + ALA L E+ + + + +D ETLGAY+
Sbjct: 85 VAVRIDRTSANSRRIGGEIVVNASLLDVWSILTDYDRLSTHVPNLVASKRVSGGSGEPGDGSYK-CRLYQRGAQKIIGFQFGADVTMDMTEAVVDAGKASGQPAGADSKLFPQERRIDFKCVDSQFFSEFDGTWRVVEMPENAFTGEPE-----TTVSYTVEVRPKGPVPVAALEWRIREDVPTNLRAVKKAAIEVGYEGVQAEKDGNPIGKALARLNGSLNEKAQSASSSAEGFADFILDYENETLGAYL 329 The following BLAST results are available for this feature:
BLAST of EWM26918.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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