EWM26926.1, cds3746 (CDS) Nannochloropsis gaditana

Overview
NameEWM26926.1
Unique Namecds3746
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1147769..1148069 -
Alignment locationCM002461.1:1147520..1147608 -
Alignment locationCM002461.1:1147301..1147382 -
Alignment locationCM002461.1:1147130..1147188 -
Alignment locationCM002461.1:1146898..1147017 -
Alignment locationCM002461.1:1146718..1146762 -
Alignment locationCM002461.1:1146578..1146641 -
Alignment locationCM002461.1:1146390..1146466 -
Alignment locationCM002461.1:1146218..1146309 -
Alignment locationCM002461.1:1145971..1146043 -
Alignment locationCM002461.1:1145759..1145860 -
Alignment locationCM002461.1:1145357..1145434 -
Alignment locationCM002461.1:1145005..1145139 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26926.1
Producthistone acetyltransferase complex component
Orig transcript idgnl|cribi|Naga_100791g1.10682.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1147769..1148069 -
CM002461.1supercontigCM002461.1:1147520..1147608 -
CM002461.1supercontigCM002461.1:1147301..1147382 -
CM002461.1supercontigCM002461.1:1147130..1147188 -
CM002461.1supercontigCM002461.1:1146898..1147017 -
CM002461.1supercontigCM002461.1:1146718..1146762 -
CM002461.1supercontigCM002461.1:1146578..1146641 -
CM002461.1supercontigCM002461.1:1146390..1146466 -
CM002461.1supercontigCM002461.1:1146218..1146309 -
CM002461.1supercontigCM002461.1:1145971..1146043 -
CM002461.1supercontigCM002461.1:1145759..1145860 -
CM002461.1supercontigCM002461.1:1145357..1145434 -
CM002461.1supercontigCM002461.1:1145005..1145139 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0140110transcription regulator activity
GO:0016740transferase activity
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0016573histone acetylation
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR017884SANT_dom
IPR016827Ada2/TADA2
IPR009057Homeodomain-like
IPR000433Znf_ZZ
IPR001005SANT/Myb
Homology
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|585109059|gb|EWM26926.1| (histone acetyltransferase complex component [Nannochloropsis gaditana])

HSP 1 Score: 911.368 bits (2354), Expect = 0.000e+0
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query:    1 MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERARGRDVCMNCDGRKEGWKG 438
            MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERARGRDVCMNCDGRKEGWKG
Sbjct:    1 MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERARGRDVCMNCDGRKEGWKG 438          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|553191669|ref|XP_005855429.1| (histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526] >gi|422293636|gb|EKU20936.1| histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 850.892 bits (2197), Expect = 0.000e+0
Identity = 416/441 (94.33%), Postives = 416/441 (94.33%), Query Frame = 0
Query:    1 MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEA-------------------------EGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQ 416
            MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEA                         EGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQ
Sbjct:    1 MALPDTVATMAHDSMEVSTSVHASVQDAAENSTAVTPLSKMKGDAETAAGPAAAVPPTTSQHTPGGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAVHLIGAPPPPPDGTPYERPRAGREREGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQ 441          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|857975964|emb|CEO98143.1| (hypothetical protein PBRA_006257 [Plasmodiophora brassicae])

HSP 1 Score: 263.462 bits (672), Expect = 1.356e-78
Identity = 138/342 (40.35%), Postives = 210/342 (61.40%), Query Frame = 0
Query:   84 FHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMR-----PLDLARYPEAEGGKEGEGKTGKEKEGEGKEGG--PSQANDAIP---GYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRK 415
            + C+YC +DIS T+RI+CAE   C D+DLC++CF  GVE+  HKNDHPYRV++    PIF  DW A EE LLL  + A G GNW  +AE +  K K  + C  HY  +YL    + LP+          L+  ++Y+       P+D      +E G E    +  +K G  K     P++A +++    GY   RGDFD E+DNEAE  L++ME LP + P E++LKL V+ ++N+ LDER++RK F+     +D + L    +++ ++ER+L  K+  FAR+Q+ ++H +F+ G++   RLRKRIEQLQ++R +GI+T +E++ YE EK++RE  + +RK
Sbjct:   90 YECDYCRKDISTTVRIRCAE---CTDFDLCLECFSTGVEMLSHKNDHPYRVIEYISEPIFDRDWGADEERLLLEGIVACGFGNWADIAEYVGTKSK--QKCQAHYTAVYLSGATAPLPQM------DAPLLDFKDYKKDGPVSVPIDRRLSILSEPGAEPASASMGKKAGSAKPSTAPPAKAQESLARMVGYCAKRGDFDTEYDNEAEKYLSDMEFLPTDSPEERRLKLDVIAIYNKTLDERQRRKDFI-----LDRELLIPSGRKRSREERDLCQKMACFARFQSKEDHAKFIQGLINENRLRKRIEQLQEHRLMGIQTLSESVQYEIEKKKREANKVLRK 415          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|301114429|ref|XP_002998984.1| (transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4] >gi|262111078|gb|EEY69130.1| transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 256.914 bits (655), Expect = 2.754e-76
Identity = 150/366 (40.98%), Postives = 217/366 (59.29%), Query Frame = 0
Query:   86 CNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIF--------------------------SPD-----WTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERA 420
            C  C +D++  IRI CAE  + P ++LCV+CF  G+ELG HK +H Y V D   +P+                           S D     WTA EELLLL  +E  GMGNW  +AE  +   KT+K C +HY   YL  +  ++P+  LG  +   +++  +  +R            G  GE              GPSQ    + GYMPLRGDFDVE+DNEAE+ILA+ME    + PAE++LKL V+ ++N+KL +R +RK FV E  L+DYK  Q+ E+++PK+EREL+A++R FAR+QTP++HE+FV G++ A RL+K+I  LQ+YR+ G++T AEA  Y+ EK++RE +Q ++KQ + A
Sbjct:   29 CLNCQKDLTRNIRITCAECKSQPHFELCVECFAVGIELGDHKKNHKYTVSDCLAFPLVHELLTTESATVTPPAVGTNAAAFLATSNDAANVVWTADEELLLLEGIEVFGMGNWKDIAE--HVATKTDKKCEKHYLTAYL-GWKDLVPR-FLGDEKAAEMIAASDQVVR------------GAPGE------------RSGPSQ----LAGYMPLRGDFDVEYDNEAEIILADMEFSEGDHPAERELKLKVIQIYNQKLAKRMERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEDHEKFVEGLITAMRLKKQILLLQEYRKNGVKTLAEAELYDAEKKKRELDQAIQKQRDSA 362          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|168066073|ref|XP_001784968.1| (predicted protein [Physcomitrella patens] >gi|162663471|gb|EDQ50233.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 253.062 bits (645), Expect = 2.810e-75
Identity = 139/360 (38.61%), Postives = 216/360 (60.00%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALV-----SEEE----------YRMRPLDLARYPEAEGGKEGEGKTGKEKEG--EGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERAR 421
             K  L+HCNYC +DIS TIRIKC   + CPD+DLCV+CF  GVE+  HK++H YRV+DN  +P+  P+W A EE+LLL  +E +G+GNWG+V+E +  K KT+  C +HY   Y++S  S LP  +   G++ A +     S +E           +  P +     +  G +      GK+ +   E  +GG +  +    GY   R +F+ E+DNEAE  LA+ME   ++   +++LKL ++ ++  +LDER++RK F+ E  L++ K  Q  ++++ K+EREL  + RVF RY + +EHE  + G++  ++LR+RIE+LQ+YR  G    A+A  Y +EK++RE E  +RK  E  R
Sbjct:   44 AKKALYHCNYCKKDISGTIRIKC---NKCPDFDLCVECFSVGVEITPHKSNHSYRVIDNLSFPLIHPEWNADEEILLLEGVEMYGLGNWGEVSEHVGTKTKTQ--CYDHYMATYMNSICSPLPDMSHVIGKSKAELLAMARSHQEGKKDSGVLRLVKQEPSNSPSRIKDYGAQSNRTLGGKKPKPLVEDNKGGTNGTDQT--GYHAKRQEFEPEYDNEAEHPLADMEFKDNDHETDRELKLRMLHIYISRLDERKRRKDFILERGLLNIKRQQALDRKRTKEERELYNRSRVFMRYHSAEEHEALLNGLIAERKLRQRIEELQEYRMNGCHIMADAEVYCSEKKKRETEANLRKGRETNR 396          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|545364771|ref|XP_005647424.1| (hypothetical protein COCSUDRAFT_1634, partial [Coccomyxa subellipsoidea C-169] >gi|384249398|gb|EIE22880.1| hypothetical protein COCSUDRAFT_1634, partial [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 248.054 bits (632), Expect = 2.840e-74
Identity = 130/331 (39.27%), Postives = 194/331 (58.61%), Query Frame = 0
Query:   82 GLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQ 412
             L+HCN C +DISNT+RIKCA    C D+DLC++CF  GV++  H+NDH YRVVDN  +P+F PDW A EELL+L  ++  G+GNW  VAE +  K   +  C +HY  +Y++S     P           L S  ++         Y  A       G   +       + GP+Q+   + GY   R +FD E D +AEL++AE+E   ++ P E+  K+ +V+V+N +L  RE+R+AF+++  L++ K +Q  E+R+   ERE  A+LR  ARYQ   +HE FV G+L   RLR R+ +L++ RR G+RT  EA  YE +++RR  E++
Sbjct:    1 ALYHCNNCQKDISNTVRIKCA---VCSDFDLCLECFSVGVQIHPHRNDHAYRVVDNLSFPLFHPDWGADEELLILEGVDMFGLGNWAAVAEHVGTKGAAD--CQQHYTSVYINSPAFPEPTPLASMANVNQLQSPMQHV--------YRSASQRGRANGPPNEFPLMLFAQVGPNQSE--LTGYNAKRHEFDPEFDQDAELLIAELEFQEEDSPEERAEKVRLVEVYNARLSGREERRAFIRDRGLLNVKRMQGAERRRTAYEREFHARLRPLARYQPQPDHEVFVEGLLLEARLRARLLELKEMRRAGVRTFTEAEVYEADRKRRALEER 316          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|1043295965|gb|OBZ81667.1| (Transcriptional adapter 2 [Choanephora cucurbitarum])

HSP 1 Score: 248.825 bits (634), Expect = 4.150e-73
Identity = 131/327 (40.06%), Postives = 195/327 (59.63%), Query Frame = 0
Query:   81 PGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRR 407
            P  +HC+ C  D++NT+RI+CA+   CPD+DLCV CF  G E  KHK  H YR+V    +PIFS DW A EELLL+ A E  G+GNW  +A+ +  K K+E  C +HY D+Y+ S    LP+  L         SE+EYR R     R  ++ G    +  + +    +    GPS     I GYMP R +F+ EH+N+AE  + +M    D+ P E  LK+MV+D++N +LD R +RK  + E   +D+K +Q  E+++ K+ER++  K RVF R QT Q+++ FV G+++ ++LR RI  LQ++R+ G+ T  +   YE EK+ R
Sbjct:   29 PPKYHCDACSNDVTNTVRIRCAD-KDCPDFDLCVTCFCGGAEPVKHKTWHDYRIVKPHSFPIFSEDWDADEELLLIEAAEKMGIGNWQAIADYVGTKSKSE--CEQHYLDVYVSSPDWPLPRMHLHFD-----TSEDEYRER--KRQRLQQSRGVVPRKPASSQPNNAKPITSGPSFHE--IQGYMPRRFEFETEHENDAEQFVKDMVFNDDDTPEEVDLKVMVLDIYNSRLDRRMERKNLIFERKWLDFKRMQAAERKRQKEERDIYNKTRVFCRLQTEQDYDMFVKGLVKEQQLRDRIATLQEWRQAGLTTLKQGEQYEREKQNR 343          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|1183370530|gb|ORX96424.1| (transcriptional adaptor 2 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 244.973 bits (624), Expect = 1.324e-72
Identity = 143/332 (43.07%), Postives = 205/332 (61.75%), Query Frame = 0
Query:   84 FHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGG-ETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDED-PAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQM 413
            +HC++C  +I++T+RIKCA    C D+DLCV CF  GVE+GKHKNDH Y+VVD   +PIF P W A EELLL+ ALE +GMGNW   A+ +  K K E  C +HY D Y++S    LP   L    ET A+   ++ ++    L RY                  G+  +  PS  N  I GYMP R +F+ E+DNEAE  + ++ +  DED P E +LKL V +++N KLD+R +RK F+ +  L+DY+     E+++ K+ER+LI K +VFAR QT +++E+F+ G++    LRKRI +LQ+YRR GI T AEA  YE +K +R+   ++
Sbjct:   23 YHCDFCQVNITSTVRIKCA---ICTDFDLCVKCFTHGVEIGKHKNDHDYQVVDKHTFPIFDPGWGADEELLLIEALEIYGMGNWADAADHVGTKNKEE--CEQHYIDTYVNSDTWPLPNMNLDFSPETDAVSDRKKIKVTKQALNRY------------------GKPLQSMPS--NHEIAGYMPGRFEFETEYDNEAEQYVKDL-VFGDEDTPEETELKLTVFEIYNSKLDKRMERKKFIFQRGLLDYRKNLANERKRTKEERDLINKTKVFARLQTAEDYEKFLDGLINEMSLRKRIAELQEYRRNGITTLAEAEVYERDKAQRQSNLKL 328          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|1214676649|gb|OWY97730.1| (Transcriptional adapter 2-alpha [Phytophthora megakarya])

HSP 1 Score: 247.284 bits (630), Expect = 3.712e-72
Identity = 143/366 (39.07%), Postives = 210/366 (57.38%), Query Frame = 0
Query:   86 CNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPI-------------------------------FSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYPEAEGGKEGEGKTGKEKEGEGKEGGPSQANDAIPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQEQQMRKQVERA 420
            C  C +D++  IRI C E  +   ++LCV+CF  G+ELG+HK  H Y V D   +PI                                +  WTA EELLLL  +E  GMGNW  +AE  +   K+EK C  HY   YL  +  ++P+    G     ++ E E   +  D     + +  +         +   G+  GPSQ    + GYMPLRGDFDVE+DNEAE+I+A+ME    + PAE++LKL V+ ++N KL +R +RK FV E  L+DYK  Q+ E+++PK+ERE++A++R FAR+QTP+EH+ FV G++ A RL+K+I  LQ+YR  G++T  EA  Y+ EK++RE +Q ++KQ + A
Sbjct:   56 CLNCQKDLTRNIRITCTECLSQTPFELCVECFAVGIELGEHKKSHEYTVSDCLAFPIVHEPRTTHCAPSAPSAVGTNAAAFPTANSDMINAVWTADEELLLLEGIEMFGMGNWKDIAE--HVVTKSEKKCEIHYLTAYL-GWTDLMPR--FSGD----VMDENELEGKTEDTEMATDEKATEMNTASDSLMRGSPGERNGPSQ----LAGYMPLRGDFDVEYDNEAEVIMADMEFSEGDHPAERELKLKVIQIYNEKLAKRVERKKFVVERGLLDYKLHQHTERKRPKEEREILAQMRPFARFQTPEEHDNFVEGLIAAMRLKKQILLLQEYRTNGVKTLVEAELYDTEKKKRELDQAIQKQRDSA 408          
BLAST of EWM26926.1 vs. NCBI_GenBank
Match: gi|219111409|ref|XP_002177456.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411991|gb|EEC51919.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 241.506 bits (615), Expect = 1.102e-71
Identity = 139/342 (40.64%), Postives = 200/342 (58.48%), Query Frame = 0
Query:   82 GLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGA---GVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKE---KTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEEEYRMRPLDLARYP--EAEGGKEGEGKTGKEKEGEGKEGGPSQANDA-----IPGYMPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAEALAYENEKRRREQE 410
            G+F C+YC  DIS   RI+CA    C D+DLC+DCF +      + +  +   Y V D+   P F   WT  E+L LL  ++ +G+GNW ++AE +  +    KT + CME Y+D +L  YG ILP  TL         +E E  +   D  +Y   E + G   +  +   K        PS  +       + G+MP R DFDVE +N+AE  +A+ME LP E   +KQLKL V+ ++N KLDEREKRK FV    L DY+  Q + ++ P+DER+L+ ++R+F R+ TP+EH++F+  +L+AKRLRK I +LQ YRRLGIRT  EA  YE +K RR+++
Sbjct:    1 GIFECDYCHADISQLPRIRCA---VCVDFDLCLDCFTSTDHATAIAQLNSTDKYIVYDD---PKFF--WTVEEDLRLLEGIQTNGLGNWVEIAEAVAGQGSIGKTPRRCMERYFDDFLGRYGHILPSHTLQ--------AEGEDEVEESDATKYSVEEFDKGDTDDTPSRTSKRRAVMMRSPSSMSTMATGAELSGFMPRREDFDVEWENDAEQAVADMEFLPGEPIEDKQLKLQVLAIYNSKLDEREKRKKFVLSRKLYDYRKTQTEHEKLPQDERDLVHRMRLFERFHTPEEHKEFLADLLKAKRLRKEIAKLQMYRRLGIRTLLEAEKYELDKERRQRD 326          
The following BLAST results are available for this feature:
BLAST of EWM26926.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109059|gb|EWM26926.1|0.000e+0100.00histone acetyltransferase complex component [Nanno... [more]
gi|553191669|ref|XP_005855429.1|0.000e+094.33histone acetyltransferase complex component, parti... [more]
gi|857975964|emb|CEO98143.1|1.356e-7840.35hypothetical protein PBRA_006257 [Plasmodiophora b... [more]
gi|301114429|ref|XP_002998984.1|2.754e-7640.98transcriptional adapter 2-alpha, putative [Phytoph... [more]
gi|168066073|ref|XP_001784968.1|2.810e-7538.61predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|545364771|ref|XP_005647424.1|2.840e-7439.27hypothetical protein COCSUDRAFT_1634, partial [Coc... [more]
gi|1043295965|gb|OBZ81667.1|4.150e-7340.06Transcriptional adapter 2 [Choanephora cucurbitaru... [more]
gi|1183370530|gb|ORX96424.1|1.324e-7243.07transcriptional adaptor 2 [Basidiobolus meristospo... [more]
gi|1214676649|gb|OWY97730.1|3.712e-7239.07Transcriptional adapter 2-alpha [Phytophthora mega... [more]
gi|219111409|ref|XP_002177456.1|1.102e-7140.64predicted protein, partial [Phaeodactylum tricornu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3755rna3755Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications