EWM26932.1, cds3740 (CDS) Nannochloropsis gaditana

Overview
NameEWM26932.1
Unique Namecds3740
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1123347..1123388 -
Alignment locationCM002461.1:1123006..1123146 -
Alignment locationCM002461.1:1122757..1122806 -
Alignment locationCM002461.1:1122437..1122598 -
Alignment locationCM002461.1:1122129..1122219 -
Alignment locationCM002461.1:1121960..1121999 -
Alignment locationCM002461.1:1121327..1121666 -
Alignment locationCM002461.1:1121004..1121063 -
Alignment locationCM002461.1:1120882..1120906 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26932.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100274g1.4078.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1123347..1123388 -
CM002461.1supercontigCM002461.1:1123006..1123146 -
CM002461.1supercontigCM002461.1:1122757..1122806 -
CM002461.1supercontigCM002461.1:1122437..1122598 -
CM002461.1supercontigCM002461.1:1122129..1122219 -
CM002461.1supercontigCM002461.1:1121960..1121999 -
CM002461.1supercontigCM002461.1:1121327..1121666 -
CM002461.1supercontigCM002461.1:1121004..1121063 -
CM002461.1supercontigCM002461.1:1120882..1120906 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
Homology
BLAST of EWM26932.1 vs. NCBI_GenBank
Match: gi|585109067|gb|EWM26932.1| (hypothetical protein Naga_100274g1 [Nannochloropsis gaditana])

HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query:    1 MRGLLLLLGLRLLAADLIQVQVISRAGAHKWHFPSKQWRQESAALLPAGFVGMEELGQVLKARYIGLAASMPLANVSDIYQFGDALIRTMAREQTVQSADAITYGVWSPVGRAVRGAPLTGGHQAVPVFTISPAMDYLLSAYRACPMVDFVVDTFMNGSDYQKKENATLGIRTQLGTLLNMSSELIMMPQLYDRVVLATLYGDMPSAGEYVFPSFPSLLSLPCSCVCHGSGRGTGACPALPPCLLKRWRVVESSSSSLQPLPLLGCSGFCPRFPPSRWSPWRTWPISSSTASSAPPRLASCAEAPYSPRSSDAWRP 316
            MRGLLLLLGLRLLAADLIQVQVISRAGAHKWHFPSKQWRQESAALLPAGFVGMEELGQVLKARYIGLAASMPLANVSDIYQFGDALIRTMAREQTVQSADAITYGVWSPVGRAVRGAPLTGGHQAVPVFTISPAMDYLLSAYRACPMVDFVVDTFMNGSDYQKKENATLGIRTQLGTLLNMSSELIMMPQLYDRVVLATLYGDMPSAGEYVFPSFPSLLSLPCSCVCHGSGRGTGACPALPPCLLKRWRVVESSSSSLQPLPLLGCSGFCPRFPPSRWSPWRTWPISSSTASSAPPRLASCAEAPYSPRSSDAWRP
Sbjct:    1 MRGLLLLLGLRLLAADLIQVQVISRAGAHKWHFPSKQWRQESAALLPAGFVGMEELGQVLKARYIGLAASMPLANVSDIYQFGDALIRTMAREQTVQSADAITYGVWSPVGRAVRGAPLTGGHQAVPVFTISPAMDYLLSAYRACPMVDFVVDTFMNGSDYQKKENATLGIRTQLGTLLNMSSELIMMPQLYDRVVLATLYGDMPSAGEYVFPSFPSLLSLPCSCVCHGSGRGTGACPALPPCLLKRWRVVESSSSSLQPLPLLGCSGFCPRFPPSRWSPWRTWPISSSTASSAPPRLASCAEAPYSPRSSDAWRP 316          
BLAST of EWM26932.1 vs. NCBI_GenBank
Match: gi|380021194|ref|XP_003694456.1| (PREDICTED: LOW QUALITY PROTEIN: prostatic acid phosphatase [Apis florea])

HSP 1 Score: 61.2326 bits (147), Expect = 6.695e-7
Identity = 53/193 (27.46%), Postives = 93/193 (48.19%), Query Frame = 0
Query:   33 FPSKQWRQESAALLPAG---FVGMEE---LGQVLKARYIGLAASMPLANVSDIYQFGDALIRTMAREQTVQSADAITYGVWSPVGRAVRGAPLTGGHQAVPVFTISPAMDYLLSAYRACPMVDFVVDTFMNGSDYQK--KENATL--GIRTQLGTLLNMSSELIMMPQLYDRVVLATLYGD-MPSAGEYVFPS 214
            +P+  +  ES   +P G    +G ++   LG+ ++ RY  L        ++++Y   D  I++   ++T+ SA++   G++ PVG+ +           +PV TI    DY+L+A + CP  D+ +D  +N  + +K  KEN  L   +  + G   N  S L    QLYD + +  LY   +P   + VFP 
Sbjct:   46 YPNDPYNNESIWPVPYGQLTNIGKDQHLLLGRWIRKRYSYL--------LNELYSPYDIYIQSTDVDRTLMSAESQLAGLYPPVGKQIWS---NIKWMPIPVHTIPEDKDYILAAKKYCPKYDYELDKVLNSPEMRKINKENKKLYAYLTEKTG---NKISSLRSAEQLYDTLFIENLYNKTLPEWTKSVFPD 224          
BLAST of EWM26932.1 vs. NCBI_GenBank
Match: gi|815895917|ref|XP_003485158.2| (PREDICTED: prostatic acid phosphatase-like [Bombus impatiens])

HSP 1 Score: 60.8474 bits (146), Expect = 8.047e-7
Identity = 51/186 (27.42%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   33 FPSKQWRQESAALLPAG-FVGMEELGQVLKARYIGLAASMPLANVSDIYQFGDALIRTMAREQTVQSADAITYGVWSPVGRAVRGAPLTGGHQAVPVFTISPAMDYLLSAYRACPMVDFVVDTFMNGSDYQK--KENATLGIRTQLGTLLNMSSELIMMPQLYDRVVLATLYGD-MPSAGEYVFPS 214
            +P+  +  ES   +P G    + +   +L  R+I    S  L   SD+Y   D  I++   ++T+ SA++   G++ PVG+ +           +PV TI    D +L+A + C   D+ ++  +N  + QK  KEN  L +    G   N  S L+ + QLYD + + +LY   +P   + V+P 
Sbjct:   47 YPNDPYNNESLWQVPYGQLTNIGKYQHLLLGRWIRKRYSHLL---SDLYSPHDIYIQSTDVDRTLMSAESHLAGLYPPVGKQIWS---NIKWMPIPVHTIPEDKDNVLAARKYCSRYDYELEKVLNSPEIQKINKENKRLYVYLT-GKTGNKISSLLSVKQLYDTLFIESLYNKTLPEWTKSVYPD 225          
The following BLAST results are available for this feature:
BLAST of EWM26932.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585109067|gb|EWM26932.1|0.000e+0100.00hypothetical protein Naga_100274g1 [Nannochloropsi... [more]
gi|380021194|ref|XP_003694456.1|6.695e-727.46PREDICTED: LOW QUALITY PROTEIN: prostatic acid pho... [more]
gi|815895917|ref|XP_003485158.2|8.047e-727.42PREDICTED: prostatic acid phosphatase-like [Bombus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3749rna3749Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications