EWM26940.1, cds3733 (CDS) Nannochloropsis gaditana

Overview
NameEWM26940.1
Unique Namecds3733
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1106049..1106277 +
Alignment locationCM002461.1:1106581..1106735 +
Alignment locationCM002461.1:1107020..1107142 +
Alignment locationCM002461.1:1107289..1107354 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26940.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101321g1.2569.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1106049..1106277 +
CM002461.1supercontigCM002461.1:1106581..1106735 +
CM002461.1supercontigCM002461.1:1107020..1107142 +
CM002461.1supercontigCM002461.1:1107289..1107354 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of EWM26940.1 vs. NCBI_GenBank
Match: gi|585109081|gb|EWM26940.1| (hypothetical protein Naga_101321g1 [Nannochloropsis gaditana])

HSP 1 Score: 394.43 bits (1012), Expect = 4.983e-139
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 
Query:    1 MHTHTHTTHSRAHKDSRHMPAVPSPPSVMAAGARDTSSDNQQSSKLTTAPARETLASMKNKEAAFYGMDSEEFTDRVTSIMTDYVEGAMQDVKRDFCRAMAAGRGGVRGKHGGDGKEAGAVYESHVAPRVQQLIDRFSKRVDRRADAFEIYLARNIFKVPEGTRESAGQVCVSNQREGYRMTIEALEGGG 190
            MHTHTHTTHSRAHKDSRHMPAVPSPPSVMAAGARDTSSDNQQSSKLTTAPARETLASMKNKEAAFYGMDSEEFTDRVTSIMTDYVEGAMQDVKRDFCRAMAAGRGGVRGKHGGDGKEAGAVYESHVAPRVQQLIDRFSKRVDRRADAFEIYLARNIFKVPEGTRESAGQVCVSNQREGYRMTIEALEGGG
Sbjct:    1 MHTHTHTTHSRAHKDSRHMPAVPSPPSVMAAGARDTSSDNQQSSKLTTAPARETLASMKNKEAAFYGMDSEEFTDRVTSIMTDYVEGAMQDVKRDFCRAMAAGRGGVRGKHGGDGKEAGAVYESHVAPRVQQLIDRFSKRVDRRADAFEIYLARNIFKVPEGTRESAGQVCVSNQREGYRMTIEALEGGG 190
The following BLAST results are available for this feature:
BLAST of EWM26940.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109081|gb|EWM26940.1|4.983e-139100.00hypothetical protein Naga_101321g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3742rna3742Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications