EWM26982.1, cds3700 (CDS) Nannochloropsis gaditana

Overview
NameEWM26982.1
Unique Namecds3700
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1025453..1025760 +
Alignment locationCM002461.1:1026037..1027389 +
Alignment locationCM002461.1:1027646..1027748 +
Alignment locationCM002461.1:1027936..1028355 +

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Properties
Property NameValue
Protein idEWM26982.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100127g23.6214.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1025453..1025760 +
CM002461.1supercontigCM002461.1:1026037..1027389 +
CM002461.1supercontigCM002461.1:1027646..1027748 +
CM002461.1supercontigCM002461.1:1027936..1028355 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26982.1 vs. NCBI_GenBank
Match: gi|585109149|gb|EWM26982.1| (hypothetical protein Naga_100127g23 [Nannochloropsis gaditana])

HSP 1 Score: 1471.06 bits (3807), Expect = 0.000e+0
Identity = 727/727 (100.00%), Postives = 727/727 (100.00%), Query Frame = 0 
Query:    1 MDNRAEPRSKRVYRHTQKDVWSIQACTRRRVLSGLHNSGMAGEGGIDGLDEQIKSKEVHAVSMRHSASVHPTCGGGVQGSYCMTLIEHFVRGHVVLARARSLLHAWHLLNSQHPGQDFTNGHLHVLSFIIGINPSELPRSPLSIWPGPLSPLRLRLPGKPEGLDTEAGRLEVDDEPAFPPSTLTDREKSEGSFQDDGEGHRAWDGGDFWWDGGRDGGASAGGGRTDVRIGDLQEVFGRAIYKNQEDVVPNHDAGQSGWGGLGDMEEGGQQGTEDGSRRRGGGGGGGGGGGGEEDAVEGRKEERNPDHSALTPHALKEPCPKQDGRSCNPSSLSPNLRRKRCRLSPLATPLATSPSHHLTPGIPAPMLDLRASTGGAMAYLEPSPPSLLPQPHMQSKSPPPCRAVPPPSRHAQGGTAGRAGRGQEEESRGPRERKEGQEEEEGERKVEGFGEAGGPAGGRGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLKMLGKADFDVRSLEDNRATGNADGAQPARKRLRRVLLPEEHEAFITTYVSENGRHWAFTLDVIPLLSGEDEDEDEETKPDEQDAVLGVRDLHMPPVTRFLNSRGCLGDFEGVDMDMSSNISSLPTSPMVGPEDREDVAFN 727
            MDNRAEPRSKRVYRHTQKDVWSIQACTRRRVLSGLHNSGMAGEGGIDGLDEQIKSKEVHAVSMRHSASVHPTCGGGVQGSYCMTLIEHFVRGHVVLARARSLLHAWHLLNSQHPGQDFTNGHLHVLSFIIGINPSELPRSPLSIWPGPLSPLRLRLPGKPEGLDTEAGRLEVDDEPAFPPSTLTDREKSEGSFQDDGEGHRAWDGGDFWWDGGRDGGASAGGGRTDVRIGDLQEVFGRAIYKNQEDVVPNHDAGQSGWGGLGDMEEGGQQGTEDGSRRRGGGGGGGGGGGGEEDAVEGRKEERNPDHSALTPHALKEPCPKQDGRSCNPSSLSPNLRRKRCRLSPLATPLATSPSHHLTPGIPAPMLDLRASTGGAMAYLEPSPPSLLPQPHMQSKSPPPCRAVPPPSRHAQGGTAGRAGRGQEEESRGPRERKEGQEEEEGERKVEGFGEAGGPAGGRGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLKMLGKADFDVRSLEDNRATGNADGAQPARKRLRRVLLPEEHEAFITTYVSENGRHWAFTLDVIPLLSGEDEDEDEETKPDEQDAVLGVRDLHMPPVTRFLNSRGCLGDFEGVDMDMSSNISSLPTSPMVGPEDREDVAFN
Sbjct:    1 MDNRAEPRSKRVYRHTQKDVWSIQACTRRRVLSGLHNSGMAGEGGIDGLDEQIKSKEVHAVSMRHSASVHPTCGGGVQGSYCMTLIEHFVRGHVVLARARSLLHAWHLLNSQHPGQDFTNGHLHVLSFIIGINPSELPRSPLSIWPGPLSPLRLRLPGKPEGLDTEAGRLEVDDEPAFPPSTLTDREKSEGSFQDDGEGHRAWDGGDFWWDGGRDGGASAGGGRTDVRIGDLQEVFGRAIYKNQEDVVPNHDAGQSGWGGLGDMEEGGQQGTEDGSRRRGGGGGGGGGGGGEEDAVEGRKEERNPDHSALTPHALKEPCPKQDGRSCNPSSLSPNLRRKRCRLSPLATPLATSPSHHLTPGIPAPMLDLRASTGGAMAYLEPSPPSLLPQPHMQSKSPPPCRAVPPPSRHAQGGTAGRAGRGQEEESRGPRERKEGQEEEEGERKVEGFGEAGGPAGGRGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLKMLGKADFDVRSLEDNRATGNADGAQPARKRLRRVLLPEEHEAFITTYVSENGRHWAFTLDVIPLLSGEDEDEDEETKPDEQDAVLGVRDLHMPPVTRFLNSRGCLGDFEGVDMDMSSNISSLPTSPMVGPEDREDVAFN 727
[Close]
BLAST of EWM26982.1 vs. NCBI_GenBank
Match: gi|553179835|ref|XP_005852770.1| (hypothetical protein NGA_0689400, partial [Nannochloropsis gaditana CCMP526] >gi|422295762|gb|EKU23061.1| hypothetical protein NGA_0689400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 268.47 bits (685), Expect = 4.514e-83
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 
Query:  459 RGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLK 588
            RGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLK
Sbjct:    1 RGGREPQEVETEIYAGGREGKGRWAQNNRLPSPEANAVMARCGIFWSLPTEEEGGREGACLEVVCDKSFAAIFLTEEELRIDMAEKGWGVDVLWESIIAPESLPTYYEGLIESGFCVPPGQVGCSRKVLK 130
The following BLAST results are available for this feature:
BLAST of EWM26982.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109149|gb|EWM26982.1|0.000e+0100.00hypothetical protein Naga_100127g23 [Nannochlorops... [more]
gi|553179835|ref|XP_005852770.1|4.514e-83100.00hypothetical protein NGA_0689400, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3709rna3709Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications