EWM26989.1, cds3688 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|585109156|gb|EWM26989.1| (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 1497.26 bits (3875), Expect = 0.000e+0 Identity = 728/728 (100.00%), Postives = 728/728 (100.00%), Query Frame = 0
Query: 1 MSDLDQYSREMLEQALLDSLQDGSPVSPPPDPAPKQSDSDEDGVEWEERLWRELPQELWDKVVMRNGVPGLHDSRAICKTLIEALYDPRIHKHVDVTKDGLRRFFEALTTHSDHVLHSHELQEAFQRTLKDFGVWEGERPEFRQYWKKTWAEMLLVLTRVMHGDKSSGSAGGEARRQGDTFCFGAFAGLLRRLKLELALRVWEKSMGPRVMSLASRRSIVEIDIDEGKRGRGGSGEQEGNGQEIPEIPGMADVKWPRRLSALYNLEEEEVVLKTYVWNARRVRGLDVTRRNMRDFFLGHRDPEWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQPRFLKYGGHYFLILPLLRLVRDAAEAKGEHSTRATPTSLPDHGDTPKKEDRWKVAASQDFADIALETSRLAIFAAGPPHFDTIITIHGAWQRVRNRCCSLEPPTPNESVPGKRNVFERMTAPVPIETGACAAIPMEAAPSLAWTHETFSTPSIPPLPGDLSSAPRSGDKPHALNPEGSTPPPMGPTSVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFVGKARAWARAAGRICRSFGKSLERT 728
MSDLDQYSREMLEQALLDSLQDGSPVSPPPDPAPKQSDSDEDGVEWEERLWRELPQELWDKVVMRNGVPGLHDSRAICKTLIEALYDPRIHKHVDVTKDGLRRFFEALTTHSDHVLHSHELQEAFQRTLKDFGVWEGERPEFRQYWKKTWAEMLLVLTRVMHGDKSSGSAGGEARRQGDTFCFGAFAGLLRRLKLELALRVWEKSMGPRVMSLASRRSIVEIDIDEGKRGRGGSGEQEGNGQEIPEIPGMADVKWPRRLSALYNLEEEEVVLKTYVWNARRVRGLDVTRRNMRDFFLGHRDPEWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQPRFLKYGGHYFLILPLLRLVRDAAEAKGEHSTRATPTSLPDHGDTPKKEDRWKVAASQDFADIALETSRLAIFAAGPPHFDTIITIHGAWQRVRNRCCSLEPPTPNESVPGKRNVFERMTAPVPIETGACAAIPMEAAPSLAWTHETFSTPSIPPLPGDLSSAPRSGDKPHALNPEGSTPPPMGPTSVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFVGKARAWARAAGRICRSFGKSLERT
Sbjct: 1 MSDLDQYSREMLEQALLDSLQDGSPVSPPPDPAPKQSDSDEDGVEWEERLWRELPQELWDKVVMRNGVPGLHDSRAICKTLIEALYDPRIHKHVDVTKDGLRRFFEALTTHSDHVLHSHELQEAFQRTLKDFGVWEGERPEFRQYWKKTWAEMLLVLTRVMHGDKSSGSAGGEARRQGDTFCFGAFAGLLRRLKLELALRVWEKSMGPRVMSLASRRSIVEIDIDEGKRGRGGSGEQEGNGQEIPEIPGMADVKWPRRLSALYNLEEEEVVLKTYVWNARRVRGLDVTRRNMRDFFLGHRDPEWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQPRFLKYGGHYFLILPLLRLVRDAAEAKGEHSTRATPTSLPDHGDTPKKEDRWKVAASQDFADIALETSRLAIFAAGPPHFDTIITIHGAWQRVRNRCCSLEPPTPNESVPGKRNVFERMTAPVPIETGACAAIPMEAAPSLAWTHETFSTPSIPPLPGDLSSAPRSGDKPHALNPEGSTPPPMGPTSVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFVGKARAWARAAGRICRSFGKSLERT 728
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|585108677|gb|EWM26589.1| (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 189.504 bits (480), Expect = 7.923e-47 Identity = 138/468 (29.49%), Postives = 219/468 (46.79%), Query Frame = 0
Query: 295 FFLGHRDP-EWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQPRFLKYGGHYFLILPLLRLVRDAAEA-------KGEHS----TRATPTSLPDHGDTPKKEDRWKVAASQ---------------DFADIALETSRLAIFAAGPPHFDTIITIHGAWQRVRNRCCSL---EPPTPNESVPGK--RNVFERMTAPVPIETGACAAIPMEAAPSLAWTHETFSTPSIPPLPGDLSSAPRSGDKPHALNP-----------EGSTPPPMGPTSVLGAA-------------FRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFVGK 706
FF HRDP ++ +RW+ + DR I+R +IKY HPL +ED LKLE QQP+ KYG HYF+++P RL R++ EA + +S + A +L HG T ++E + Q DF +E S+L IF AG P +DT+I++HG W+ + + E + G+ + + R + + G ++ +A TH GDL S K ++ +G P S +G A L DYS++R GNS +L+ IL+ + +IPI Y TR+ FQ L+ ++ +E + + ++ +K +L LQ+RI+ M V+R L+ + + +D + Y++ V D + ++I + + S +E K L+D NE L VVT +F PLQFL G +G NF+ K
Sbjct: 350 FFTTHRDPKDFMMRWLHLEGLDRLTILRFAIKYSLHPLCVEDALKLEDQQPKVNKYGCHYFIVMPFFRLTRESREALKTLRQQRRRYSSIIKSTAEAAALLAHGATGQRERGGLQGSGQASPNDRRHKGKESWSDF-HFRVEWSKLCIFMAGAPSYDTLISLHGKWETFNSETDEMLRGEEGPGGKKGAGEEWKGMGSRTESSASMAKGGNSSFVGGSAS----THGLRFRRGGGREAGDLDSGEDGLIKDDSMAASHYEHHVRYGWDGQESGSTSPYSGVGGANSSFSQGHIFERLVTALKVDYSTLRQGNSKHLLYRILDEVVDFLIPIAQAYRTRVRLFQAQLHRNESTFKKEHM-RLVLGMKSELQRLQRRIRPMTAVVRHLMDDEQIGQDMKV-YLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFMNK 810
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|553189904|ref|XP_005855097.1| (magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293963|gb|EKU21263.1| magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.2117 bits (243), Expect = 3.151e-18 Identity = 54/165 (32.73%), Postives = 93/165 (56.36%), Query Frame = 0
Query: 539 LHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
++ + +V +++W+LH+IL+ ++PI+ Y+ R+ FQ L+ A + R +K +MD K DL+ LQ+R+ P++R LI + E Y Q V D L D ++ + +AQS++DE+ +++ NE L ++T++F P FLAG FG NF
Sbjct: 186 MYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGR-TKMVMDTKLDLLWLQRRVALSKPIIRQLIR---IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNF 346
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|1129190016|gb|OLP95351.1| (Magnesium transport protein CorA [Symbiodinium microadriaticum]) HSP 1 Score: 99.7525 bits (247), Expect = 6.870e-18 Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 0
Query: 264 NLEEEEVVLKTYVWNARRVRGLDVTR--RNMRDFFLGHRDPEWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQ-PRFLKYGGHYFLILPLLRLVRDAAEAKGEHSTRATPTSLPDHGDTPKKEDRWKVAASQDFADIALETSRLAIFAAGPPHFDTIITIHGAWQRVR 437
L EE + WN RR+ R R M DFFL HR + ++RWV R I+RL++KY HPL +ED+++LE+Q P KY ++F+++PLLRL +A ++ + ++ + A F LE R A FAAGPPH+DT+I+ W++ +
Sbjct: 413 QLPEESGFIGFIDWNQRRIDEFYFRRPERPM-DFFLTHRKAQMKMRWVHCARVGRPTILRLAVKYQLHPLPVEDLIQLEQQSVPLVRKYNENFFVVIPLLRLTSEAKRKLSQYRELRS-----------RRISDVQAEAEDIFTAPELEHCRFACFAAGPPHYDTVISFMTEWKKCQ 577 HSP 2 Score: 81.6481 bits (200), Expect = 3.078e-12 Identity = 45/173 (26.01%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 532 LGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFV 704
R + DYS +R GN++W+L +++ + PI++ Y +L F + +A R+ + + K ++ K +L +Q++++ +L VL+ LI + ++ D Y++ V D L++ ++++ ++ + SL DE +D + + L + +VT L P L G FG N++
Sbjct: 634 FAGVVRQIQRDYSMLRAGNASWILWRLVDVTIDELSPILSAYRAQLRWFSSLITTQEA-RVSKDVEKRLLRSKVELDWVQRKVRPILKVLKHLIKDKAIDPD-VTRYLEDVEDHLNLFLEEVSRIIGVCNSLRDEVNSYRDRQQQKVLYVLTLVTTLVMPTHLLTGIFGMNWI 804
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|585109140|gb|EWM26973.1| (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 98.9821 bits (245), Expect = 1.280e-17 Identity = 54/165 (32.73%), Postives = 93/165 (56.36%), Query Frame = 0
Query: 539 LHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
++ + +V +++W+LH+IL+ ++PI+ Y+ R+ FQ L+ A + R +K +MD K DL+ LQ+R+ P++R LI + E Y Q V D L D ++ + +AQS++DE+ +++ NE L ++T++F P FLAG FG NF
Sbjct: 639 MYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGR-TKMVMDTKLDLLWLQRRVALSKPIIRQLIR---IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNF 799 HSP 2 Score: 96.2857 bits (238), Expect = 8.444e-17 Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 0
Query: 260 SALYNLE-EEEVVLKTYVWNARRVRGLDVTRRN-MRDFFLGHRDPEWRVRWVIADWSDRANIIRLSIKYCFHPLHLEDVLKLERQQPRFLKYGGHYFLILPLLRLVRDAAEAKGEHSTRATPTSLPDHGDTPKKEDRWKVAASQDFAD-------IALETSRLAIFAAGPPHFDT-IITIHGAWQRVRNRC 440
S L NL +E +++K + + ++ D++ N R+FFLG + PE + W+ + D NI+RL++KY H LHLEDVL+LE Q+P+ GG+YF+++ LRL R+ + RA L ++ D V S D I LE S IF PP D +I I W+ V N+
Sbjct: 253 SMLGNLGMDESLLMKVFDFTRNQMYKRDLSEGNRFRNFFLGRQAPETLLNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFIVVSTLRLARE--------TERALEAWLAENHDV--------VGVSTDRLGRRKRPFPIMLEESTGGIFTTAPPKNDNAVINIRTPWRAVNNKT 427
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|698788182|ref|XP_009827123.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574118211|gb|ETV83692.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 78.5666 bits (192), Expect = 2.092e-11 Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 0
Query: 530 SVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLS-KPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
S+ A R L YS VRH ++N++L+++L+ I + +M + L+ ++ L+ + R + + DV +L L + IK VL+ L++ L D Y++ VHD L+ + D+I + +S+ +E + K N + + +VT +F P QFL G +G NF
Sbjct: 386 SIWQAVHRRLASTYSKVRHNDANFLLYSVLDVIVDQMTGVMDDVRSYLMHLEQQLDT-----LLHRFDIETLRDVHSELGQLPRVIKPTRDVLKSLLASRDL-PDTTKAYLRDVHDHLNHILDEIEWQFQMCKSMTEEYRDAKATQTNYVVYVLTIVTTVFLPAQFLTGVYGMNF 554
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|698788180|ref|XP_009827122.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574118212|gb|ETV83693.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 78.1814 bits (191), Expect = 2.509e-11 Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 0
Query: 530 SVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLS-KPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
S+ A R L YS VRH ++N++L+++L+ I + +M + L+ ++ L+ + R + + DV +L L + IK VL+ L++ L D Y++ VHD L+ + D+I + +S+ +E + K N + + +VT +F P QFL G +G NF
Sbjct: 377 SIWQAVHRRLASTYSKVRHNDANFLLYSVLDVIVDQMTGVMDDVRSYLMHLEQQLDT-----LLHRFDIETLRDVHSELGQLPRVIKPTRDVLKSLLASRDL-PDTTKAYLRDVHDHLNHILDEIEWQFQMCKSMTEEYRDAKATQTNYVVYVLTIVTTVFLPAQFLTGVYGMNF 545
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|698788178|ref|XP_009827121.1| (hypothetical protein H257_04356 [Aphanomyces astaci] >gi|574118210|gb|ETV83691.1| hypothetical protein H257_04356 [Aphanomyces astaci]) HSP 1 Score: 77.7962 bits (190), Expect = 3.269e-11 Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 0
Query: 530 SVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLS-KPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
S+ A R L YS VRH ++N++L+++L+ I + +M + L+ ++ L+ + R + + DV +L L + IK VL+ L++ L D Y++ VHD L+ + D+I + +S+ +E + K N + + +VT +F P QFL G +G NF
Sbjct: 386 SIWQAVHRRLASTYSKVRHNDANFLLYSVLDVIVDQMTGVMDDVRSYLMHLEQQLDT-----LLHRFDIETLRDVHSELGQLPRVIKPTRDVLKSLLASRDL-PDTTKAYLRDVHDHLNHILDEIEWQFQMCKSMTEEYRDAKATQTNYVVYVLTIVTTVFLPAQFLTGVYGMNF 554
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|673029808|ref|XP_008868865.1| (magnesium and cobalt transporter CorA [Aphanomyces invadans] >gi|574475260|gb|ETW02260.1| magnesium and cobalt transporter CorA [Aphanomyces invadans]) HSP 1 Score: 75.8702 bits (185), Expect = 1.326e-10 Identity = 51/175 (29.14%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 530 SVLGAAFRLLHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLS-KPIMDVKHDLISLQQRIKSMLPVLRGLISEPSLREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNF 703
S+ A R L YS VRH ++N++L+++L+ I + +M + L + +L+ +R R + + DV +L L + IK VL+ L++ L D Y++ VHD L+ + D+I + +S+ +E + K N + +VT +F P QFL G +G NF
Sbjct: 362 SIWHAVHRRLASTYSKVRHNDANFLLYSVLDVIVDQMTGVMDDVRSYLKHLEHELDT-----LRHRFDIETLRDVHTELGQLPRVIKPTRDVLKSLLASRDL-PDTTKAYLRDVHDHLNHILDEIEWQFQMCRSMTEEYRDAKAAQVNYVVYTLTIVTTVFLPAQFLTGVYGMNF 530
BLAST of EWM26989.1 vs. NCBI_GenBank
Match: gi|502589598|ref|WP_012827260.1| (magnesium and cobalt transport protein CorA [Haliangium ochraceum] >gi|262078683|gb|ACY14652.1| magnesium and cobalt transport protein CorA [Haliangium ochraceum DSM 14365]) HSP 1 Score: 74.3294 bits (181), Expect = 1.789e-10 Identity = 43/173 (24.86%), Postives = 87/173 (50.29%), Query Frame = 0
Query: 539 LHEDYSSVRHGNSNWMLHTILETITKMIIPIMALYETRLLAFQRDLNGPDAPRMRERLSKPIMDVKHDLISLQQRIKSMLPVLRGLISEPS-LREDEALFYIQGVHDDLHVLYDDINTMLVLAQSLLDESKYLKDDTRNEALKLFAVVTALFCPLQFLAGYFGTNFVGKARAW 710
L +RH S+++ + +L+ + +P++ Y R+ A +R++ P L I +++H++ L++ ++ ML V+ L +E L +E + Y++ +D L D+++ VLA SL++ NE +K+ +++ +F PL F+ G +G NF W
Sbjct: 168 LRRSMGRIRHAKSDYLAYAVLDAVIDHYVPVLDRYGERIEALEREIIFRPDPV----LVAHIYELRHEVEELRRAVRPMLDVVGRLHNEEVPLFSEEVMPYLRDCYDHTVRLVDNVDHQRVLAASLMELHLSSMSQRMNEVMKVLTIISTIFIPLSFVVGLYGMNFDPTVSPW 336 The following BLAST results are available for this feature:
BLAST of EWM26989.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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