EWM26973.1, cds3687 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|585109140|gb|EWM26973.1| (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 1754.96 bits (4544), Expect = 0.000e+0 Identity = 846/846 (100.00%), Postives = 846/846 (100.00%), Query Frame = 0 Query: 1 MGLPGVYAHGLYCHIATPIGNKPSRVCHTLDVAIPIQECPTHSTSVNHLLQNGPGGPSPMPSISKAAASNKNDRDATSTVSDAVDMARIPEYIWLDLVDEANLEGSLLPGIHRRVDSSEEAIVKAFNVLDRDKTGNLSRPQFTEGLNRCLITFNGNSLPSDLPALEALWRATSSSEDANGFVTQETFGAVLRRLKLELLLPPLVDHSLESSYARTGDGGGGAMAEACDGEHAASRAPPPLGHAGSKMTNQQHSMLGNLGMDESLLMKVFDFTRNQMYKRDLSEGNRFRNFFLGRQAPETLLNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFIVVSTLRLARETERALEAWLAENHDVVGVSTDRLGRRKRPFPIMLEESTGGIFTTAPPKNDNAVINIRTPWRAVNNKTGTRMSMRRTASVLGGTTPSTPSTRALRPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQGGVTDAPLQLSGHEESTWEDHFIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC 846 MGLPGVYAHGLYCHIATPIGNKPSRVCHTLDVAIPIQECPTHSTSVNHLLQNGPGGPSPMPSISKAAASNKNDRDATSTVSDAVDMARIPEYIWLDLVDEANLEGSLLPGIHRRVDSSEEAIVKAFNVLDRDKTGNLSRPQFTEGLNRCLITFNGNSLPSDLPALEALWRATSSSEDANGFVTQETFGAVLRRLKLELLLPPLVDHSLESSYARTGDGGGGAMAEACDGEHAASRAPPPLGHAGSKMTNQQHSMLGNLGMDESLLMKVFDFTRNQMYKRDLSEGNRFRNFFLGRQAPETLLNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFIVVSTLRLARETERALEAWLAENHDVVGVSTDRLGRRKRPFPIMLEESTGGIFTTAPPKNDNAVINIRTPWRAVNNKTGTRMSMRRTASVLGGTTPSTPSTRALRPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQGGVTDAPLQLSGHEESTWEDHFIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC Sbjct: 1 MGLPGVYAHGLYCHIATPIGNKPSRVCHTLDVAIPIQECPTHSTSVNHLLQNGPGGPSPMPSISKAAASNKNDRDATSTVSDAVDMARIPEYIWLDLVDEANLEGSLLPGIHRRVDSSEEAIVKAFNVLDRDKTGNLSRPQFTEGLNRCLITFNGNSLPSDLPALEALWRATSSSEDANGFVTQETFGAVLRRLKLELLLPPLVDHSLESSYARTGDGGGGAMAEACDGEHAASRAPPPLGHAGSKMTNQQHSMLGNLGMDESLLMKVFDFTRNQMYKRDLSEGNRFRNFFLGRQAPETLLNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFIVVSTLRLARETERALEAWLAENHDVVGVSTDRLGRRKRPFPIMLEESTGGIFTTAPPKNDNAVINIRTPWRAVNNKTGTRMSMRRTASVLGGTTPSTPSTRALRPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQGGVTDAPLQLSGHEESTWEDHFIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC 846
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|553189904|ref|XP_005855097.1| (magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293963|gb|EKU21263.1| magnesium and cobalt transport protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0 Identity = 391/393 (99.49%), Postives = 391/393 (99.49%), Query Frame = 0 Query: 454 RPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQGGVTDAPLQLSGHEESTWEDHFIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC 846 RPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQ GVTDAPLQLSGHEESTWEDH IDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC Sbjct: 1 RPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPPPQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGMVPKVSFAKRTAMNGQDGVTDAPLQLSGHEESTWEDHVIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC 393
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|585108677|gb|EWM26589.1| (magnesium and cobalt transport protein [Nannochloropsis gaditana]) HSP 1 Score: 148.288 bits (373), Expect = 5.487e-33 Identity = 72/200 (36.00%), Postives = 119/200 (59.50%), Query Frame = 0 Query: 630 HVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLI--RIAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFIL 827 H+ + + + T+ + ++ LL+ ILD VD L+PI +AY+ RV FQ LH++ + F K ++V+ K +L LQRR+ ++R L+ ++++Y +DV DH+ R L+ + G M S +E + R++R NE+L +T++T++F P FL GV+GMNF +G+P+MPEL W GYL+FW + L Sbjct: 636 HIFERLVTALKVDYSTLRQGNSKHLLYRILDEVVDFLIPIAQAYRTRVRLFQAQLHRNESTFKKEHMRLVLGMKSELQRLQRRIRPMTAVVRHLMDDEQIGQDMKVYLEDVLDHVVRGLEEIGGCIEMCDSTKEEFKSLRDQRTNEVLYTLTVVTTMFVPLQFLTGVYGMNFMNKEGEPTMPELLWPRGYLFFWCMAATL 835 HSP 2 Score: 71.2478 bits (173), Expect = 5.390e-9 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 266 MKVFDFT----RNQMYKRDLSEGNRFRNFFLGRQAPETLLNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFIVVSTLRLARETERALE 366 M+V F+ + Y ++ + + F R + ++ W+ +E D + ILR A+KY +H L +ED L+LE Q+PK+ G +YFIV+ RL RE+ AL+ Sbjct: 323 MEVVKFSSLDYNEKTYSAEIPVADTYAFFTTHRDPKDFMMRWLHLEGLDRLTILRFAIKYSLHPLCVEDALKLEDQQPKVNKYGCHYFIVMPFFRLTRESREALK 427
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|857969804|emb|CEP03812.1| (hypothetical protein PBRA_003419 [Plasmodiophora brassicae]) HSP 1 Score: 119.398 bits (298), Expect = 3.022e-24 Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 0 Query: 642 NRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIRIAPTELQL--YYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPS-MPELSWEYGYLWFWLWSFILSGGVLACVRY 837 N + ST WL ++L+ L +V+A ++ + Y QD+LH A + KM++ DL LQR+V + I+R + E+ L Y D+D+ + L + + + +S+ +E ++EER+N IL +T +T+ F PA FL GV+GMNF Q + S +PEL+W YGY FW+ +LS + VR+ Sbjct: 403 NYSMLRRGSTQWLQFAMLEIISKNLTEVVDALRLFIIYHQDLLHTEEAGYKTENIKMIIALGDDLENLQRKVRPLRRIMRSVADETALEISLRRYLADLDEDINNSLLDMEQMISQCESLRNEVRTYKEERMNNILYTLTGVTTAFIPAQFLTGVYGMNFYNVQTELSPIPELTWTYGYPMFWVLVVLLSTTISVFVRW 601
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|1057517073|ref|WP_068814945.1| (magnesium and cobalt transport protein CorA [Phormidesmis priestleyi]) HSP 1 Score: 110.538 bits (275), Expect = 2.558e-22 Identity = 62/208 (29.81%), Postives = 117/208 (56.25%), Query Frame = 0 Query: 635 VAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYK 838 V E + N+GT+ +++ +L +++LD +D PI+E Y + +D+ + A+ + + + K DLL L+R + + I LIR + E+++Y +D DH + LD + +A S++D + R+NE++ F+TI+++IF P +F+AGV+GMNF T + ++PEL+W +GY W+ +++ + V +K Sbjct: 169 VRERIRLNKGTIRKHNADYLAYTLLDSIIDGFFPILERYGEEI---EDLESEVVADPTRQTLEKIHKIKRDLLTLRRSIWPQRDAINSLIRDGSDLISDEVRVYLRDCYDHAVQVLDMVETYRELASSLMDVYLSSVSNRMNEVMKFLTIVSTIFIPLTFIAGVYGMNFNTEKSPFNLPELNWYWGYP--LCWTVMVTIAAILVVFFK 371
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|497535191|ref|WP_009849389.1| (magnesium and cobalt transport protein CorA [Mariprofundus ferrooxydans] >gi|114552405|gb|EAU54888.1| Magnesium and cobalt transport protein CorA [Mariprofundus ferrooxydans PV-1]) HSP 1 Score: 110.153 bits (274), Expect = 3.170e-22 Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 0 Query: 585 DH--FIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDP-SMPELSWEYGYLWFWLWSFILSGGVLACVRYK 838 DH F+ S+PV EE + A + S F +D F + + + + + + +LL+ ILD +D+ P++E++ + + +D + +SG G+ + K +L+ L+R V + +I QL+R E +++ +D DH + +D L +MA SI+D + R+NE + + +I++IF P +F+AGV+GMNF S +P SMPEL W YGY FWL ++ G++ + K Sbjct: 117 DHQLFLVMSLPVFQGEEVITRQISLFANARYIVS--FCEGADDPF-----MPLVKRLQTKSSNLRKRGADYLLYGILDLVIDQGFPVLESFGLHLEELEDNIAESGG--GRALLDRIHILKRELILLRRMVWPQREVITQLLRENHDFIGEETRIFLRDCYDHTVQIMDLLETYRDMAGSILDIYLSSVSNRLNETMRVLAVISTIFIPMTFVAGVYGMNFDRS--NPLSMPELGWAYGYPVFWLLMIGIACGMIIFFKRK 366
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|921093489|gb|KON46801.1| (magnesium transporter [Mariprofundus ferrooxydans]) HSP 1 Score: 109.768 bits (273), Expect = 3.878e-22 Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 0 Query: 585 DH--FIDTSMPVEHPEEDGEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDP-SMPELSWEYGYLWFWLWSFILSGGVLACVRYK 838 DH F+ S+PV EE + A + S F +D F + + + + + + +LL+ ILD +D+ P++E++ + + +D + +SG G+ + K +L+ L+R V + +I QL+R E +++ +D DH + +D L +MA SI+D + R+NE + + +I++IF P +F+AGV+GMNF S +P SMPEL W YGY FWL ++ G++ + K Sbjct: 115 DHQLFLVMSLPVFQGEEVITRQISLFANARYIVS--FCEGADDPF-----MPLVKRLQTKSSNLRKRGADYLLYGILDLVIDQGFPVLESFGLHLEELEDNIAESGG--GRALLDRIHILKRELILLRRMVWPQREVITQLLRENHDFIGEETRIFLRDCYDHTVQIMDLLETYRDMAGSILDIYLSSVSNRLNETMRVLAVISTIFIPMTFVAGVYGMNFDRS--NPLSMPELGWAYGYPVFWLLMIGIACGMIIFFKRK 364
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|1180117301|ref|WP_083636686.1| (magnesium and cobalt transport protein CorA [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 109.383 bits (272), Expect = 8.993e-22 Identity = 61/202 (30.20%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 635 VAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVL 832 V E + N+G V + +L ++++D +D P++E Y ++ +D + AN + + V + K +LL L+R + + I LIR + E+++Y +D DH + LD + +A S++D + ++NEI+ +T+I+SIF P +F+AG++GMNF T +MPEL+W +GY + ++SGG++ Sbjct: 190 VRERIRTNKGLVRKMGADYLAYALIDSIIDGFFPVLETYGEQLEELED---EVVANPSRQTLEKVHELKRELLTLRRAIWPQRDAINSLIRDGNPLISEEVRIYLRDCYDHTVQVLDMVETYRELASSLMDIYLSSVSNKMNEIMKLLTVISSIFIPLTFIAGIYGMNFNTEASSWNMPELNWSFGYAACLVMMLLISGGMV 388
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|1129073545|gb|OLP19408.1| (magnesium and cobalt transport protein CorA [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 108.612 bits (270), Expect = 1.189e-21 Identity = 61/202 (30.20%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 635 VAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDPSMPELSWEYGYLWFWLWSFILSGGVL 832 V E + N+G V + +L ++++D +D P++E Y ++ +D + AN + + V + K +LL L+R + + I LIR + E+++Y +D DH + LD + +A S++D + ++NEI+ +T+I+SIF P +F+AG++GMNF T +MPEL+W +GY + ++SGG++ Sbjct: 165 VRERIRTNKGLVRKMGADYLAYALIDSIIDGFFPVLETYGEQLEELED---EVVANPSRQTLEKVHELKRELLTLRRAIWPQRDAINSLIRDGNPLISEEVRIYLRDCYDHTVQVLDMVETYRELASSLMDIYLSSVSNKMNEIMKLLTVISSIFIPLTFIAGIYGMNFNTEASSWNMPELNWSFGYAACLVMMLLISGGMV 363
BLAST of EWM26973.1 vs. NCBI_GenBank
Match: gi|1174936820|ref|WP_081610040.1| (magnesium and cobalt transport protein CorA [Mariprofundus ferrooxydans]) HSP 1 Score: 107.842 bits (268), Expect = 1.725e-21 Identity = 76/262 (29.01%), Postives = 134/262 (51.15%), Query Frame = 0 Query: 585 DH--FIDTSMPVEHPEEDGEEDV-LFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENSTHWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVMDTKLDLLWLQRRVALSKPIIRQLIR----IAPTELQLYYQDVDDHLERCLDGLSGLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQTSQGDP-SMPELSWEYGYLWFWLWSFILSGGVLACVRYK 838 DH F+ S+PV EE + LF A + F +D F + + + + + + +LL+ ILD +D+ P++E++ +++ +D + +SG G+ + K +L+ L+R V + +I QL+R + +++ +D DH + +D L +MA SI+D + R+NE + + +I++IF P +F+AGV+GMNF S +P SMPEL W YGY FWL ++ G++ + K Sbjct: 117 DHQLFLVMSLPVFQGEEVITRQISLF---ANSRYIVSFCEGADDPF-----MPLVKRLQTKSSNLRKRGADYLLYGILDLVIDQGFPVLESFGLQLEELEDNIAESGG--GRALLDRIHILKRELILLRRMVWPQREVITQLLRESHDFIGEDTRIFLRDCYDHTVQIMDLLETYRDMAGSILDIYLSSVSNRLNETMRVLAVISTIFIPMTFVAGVYGMNFDRS--NPLSMPELGWAYGYPVFWLLMIGIACGMIIFFKRK 366 The following BLAST results are available for this feature:
BLAST of EWM26973.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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