EWM26990.1, cds3685 (CDS) Nannochloropsis gaditana

Overview
NameEWM26990.1
Unique Namecds3685
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:994696..994842 +
Alignment locationCM002461.1:994988..995401 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26990.1
ProductSTART-like domain protein
Orig transcript idgnl|cribi|Naga_100127g4.6222.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:994696..994842 +
CM002461.1supercontigCM002461.1:994988..995401 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom
IPR005031Polyket_cyc
Homology
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|585109157|gb|EWM26990.1| (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 390.963 bits (1003), Expect = 1.008e-137
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0 
Query:    1 MLLLLTRHFYPIFFAYHTDVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGGREDGEEMQTRA 186
            MLLLLTRHFYPIFFAYHTDVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGGREDGEEMQTRA
Sbjct:    1 MLLLLTRHFYPIFFAYHTDVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGGREDGEEMQTRA 186
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|1214713473|gb|OWZ24364.1| (hypothetical protein PHMEG_000599 [Phytophthora megakarya])

HSP 1 Score: 114.005 bits (284), Expect = 2.297e-26
Identity = 63/152 (41.45%), Postives = 82/152 (53.95%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG 170
            DVVADVD Y  FLP+C +S VLRR   N M A L VGF N+  E YTSRV + RP  I + A+DS  F R+ES W F+P                         G   +DF++ F+VS+ L   AI + F+D+   Q++AF  R   VYG+G
Sbjct:   51 DVVADVDRYSEFLPFCVESRVLRRPNDNVMEAALRVGF-NIFTESYTSRVLMIRPNKIAVKAIDSPTFKRIESEWIFKP---------------------YTTSGSCKIDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKVYGTG 180
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|301119067|ref|XP_002907261.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105773|gb|EEY63825.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 107.842 bits (268), Expect = 2.593e-24
Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG 170
            DVVADVD Y  FLP+C +S VLRR   N M A L VGF  L  E YTSRV + RP  I   A+DS  F R+ES W F+P                         G   VDF++ F+VS+ L   AI + F+D+   Q++AF  R    YG+ 
Sbjct:    3 DVVADVDRYNEFLPFCVESRVLRRPNDNVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKPC---------------------ATPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKKYGTA 132
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|675175779|ref|XP_008896774.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568102519|gb|ETN17190.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570315442|gb|ETO63390.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 107.071 bits (266), Expect = 9.119e-24
Identity = 63/160 (39.38%), Postives = 80/160 (50.00%), Query Frame = 0 
Query:   11 PIFFAYHTDVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG 170
            P   A   DVVADV  Y  FLP+C +S VLRR   N M A L VGF  L  E YTSRV + RP  I   A+DS  F R+ES W F+P                         G   VDF++ F+VS+ L   AI + F+D+   Q++AF  R   +YG+ 
Sbjct:   48 PFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKPC---------------------STPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYGTS 185
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|566011669|gb|ETI34580.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568007361|gb|ETL81600.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568037224|gb|ETM34812.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570969491|gb|ETP32610.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 107.071 bits (266), Expect = 9.874e-24
Identity = 63/160 (39.38%), Postives = 80/160 (50.00%), Query Frame = 0 
Query:   11 PIFFAYHTDVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG 170
            P   A   DVVADV  Y  FLP+C +S VLRR   N M A L VGF  L  E YTSRV + RP  I   A+DS  F R+ES W F+P                         G   VDF++ F+VS+ L   AI + F+D+   Q++AF  R   +YG+ 
Sbjct:   48 PFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKPC---------------------STPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYGTS 185
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|953491620|emb|CEG45629.1| (hypothetical protein, variant 1 [Plasmopara halstedii])

HSP 1 Score: 102.449 bits (254), Expect = 2.524e-22
Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG 170
            DVVADV  Y  FLP+C +S VLR    N M A L VGF  +  E YTSRV + RP  I   A+DS  F R++S W F+P                   DT    G   VDF++ F+VS+ L   AI + F+D+   Q++AF  R   +YG+ 
Sbjct:    3 DVVADVARYSEFLPFCVESRVLRTPNENVMEAALRVGF-KIFTESYTSRVFMIRPSKIATKAIDSPTFKRIDSEWLFKPC------------------DT---PGSCEVDFKVTFEVSSFLHSNAIKLFFDDIARTQLNAFIGRARKIYGTS 132
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|545368047|ref|XP_005648813.1| (hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169] >gi|384250790|gb|EIE24269.1| hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 99.7525 bits (247), Expect = 5.234e-22
Identity = 57/166 (34.34%), Postives = 88/166 (53.01%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGGREDGEEMQT 184
            DVVA V++YK F+P+C +S +++  PP+F+ A+L VGF  L  E+YTS+V L RP  +     DS +F  L+STW F+P       G   G+              T + F + F   + L +    + F+++V+  + AFE RC  +YGS A        ++MQT
Sbjct:  148 DVVAAVEHYKEFVPWCQRSEIIQERPPDFVEAELEVGF-KLFVERYTSQVHLHRPGKVVSHVYDSTLFDHLDSTWEFKP-------GPTPGS--------------TWLFFSVDFAFKSPLYRHIASVFFDEVVKHMMGAFEGRCKHLYGSSAFAKRAPAAQKMQT 291
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|1056025937|ref|WP_067554197.1| (ubiquinone-binding protein [Oceanibaculum pacificum] >gi|1016464533|gb|KZD09808.1| cyclase [Oceanibaculum pacificum])

HSP 1 Score: 95.9005 bits (237), Expect = 9.424e-22
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAG 172
            D+VADV+ Y  FLP+C   A +R+  P  ++A LI+GF  +++E++TSRV LDR +           F  L + W F P   +   GS  GT           +GC  +DF + F+  + L QK I ++F + V R + AFE R HA+YG  A 
Sbjct:   19 DLVADVEKYPEFLPWCL-GARIRKREPGLLVADLIIGFK-MVRERFTSRVELDREKMRIDVTYTEGPFKYLNNHWIFLP--HEPPAGSPPGT-----------EGCM-IDFYVDFEFRSVLLQKLISVLFNEAVRRMVGAFETRAHALYGGAAA 156
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|156389426|ref|XP_001634992.1| (predicted protein [Nematostella vectensis] >gi|156222081|gb|EDO42929.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 94.7449 bits (234), Expect = 2.010e-21
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGG 175
            +VVADVD+YK F+P+C  S   RR P  F  A+L VGF  LL EKYTS V +  P  +     D ++F  + + W F P  +D                    + CT +DF + F+  + L  +   M F+++V++ + AFEDRC  +YG    K G
Sbjct:   10 NVVADVDDYKHFVPWCRDSTTFRRRPGCFK-AKLCVGFPPLLSEKYTSTVTIVPPNLVKSECTDGEMFNYMLTVWKFGPGLKDNP------------------NTCT-LDFFVEFEFKSLLHSRLSTMFFDEVVKKMVRAFEDRCAYLYGPQRLKMG 146
[Close]
BLAST of EWM26990.1 vs. NCBI_GenBank
Match: gi|1189154315|ref|WP_085583240.1| (ubiquinone-binding protein [Thalassospira mesophila] >gi|1187739290|gb|OSQ37914.1| cyclase [Thalassospira mesophila])

HSP 1 Score: 93.5893 bits (231), Expect = 4.445e-21
Identity = 55/158 (34.81%), Postives = 80/158 (50.63%), Query Frame = 0 
Query:   19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTAGGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSGAGKGGR 176
            D+VAD+D+Y  FLP+C  S V +R   N + A L++GF  + +EKYTS+V LDRP  + +  L    F  L + W FQP                        DG T +DF + F+  +++ QK I MVF + V+  + +FE+R   VYG       R
Sbjct:   19 DLVADIDSYSEFLPWCAASRVRKR-DGNELHADLVIGFK-MFREKYTSKVTLDRPNRVDVEYLQGP-FKYLNNHWEFQPA----------------------DDGGTFLDFYVDFEFKSAILQKMIGMVFNEAVKLMVGSFENRARQVYGDNGIASSR 151
The following BLAST results are available for this feature:
BLAST of EWM26990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109157|gb|EWM26990.1|1.008e-137100.00START-like domain protein [Nannochloropsis gaditan... [more]
gi|1214713473|gb|OWZ24364.1|2.297e-2641.45hypothetical protein PHMEG_000599 [Phytophthora me... [more]
gi|301119067|ref|XP_002907261.1|2.593e-2440.79conserved hypothetical protein [Phytophthora infes... [more]
gi|675175779|ref|XP_008896774.1|9.119e-2439.38hypothetical protein, variant 1 [Phytophthora para... [more]
gi|566011669|gb|ETI34580.1|9.874e-2439.38hypothetical protein, variant 1 [Phytophthora para... [more]
gi|953491620|emb|CEG45629.1|2.524e-2239.47hypothetical protein, variant 1 [Plasmopara halste... [more]
gi|545368047|ref|XP_005648813.1|5.234e-2234.34hypothetical protein COCSUDRAFT_28720 [Coccomyxa s... [more]
gi|1056025937|ref|WP_067554197.1|9.424e-2236.36ubiquinone-binding protein [Oceanibaculum pacificu... [more]
gi|156389426|ref|XP_001634992.1|2.010e-2135.03predicted protein [Nematostella vectensis] >gi|156... [more]
gi|1189154315|ref|WP_085583240.1|4.445e-2134.81ubiquinone-binding protein [Thalassospira mesophil... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3694rna3694Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications