EWM26994.1, cds3679 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|585109163|gb|EWM26994.1| (mitochondrial serine protease [Nannochloropsis gaditana]) HSP 1 Score: 335.109 bits (858), Expect = 2.107e-116 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW 162
MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW
Sbjct: 1 MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW 162
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|675178103|ref|XP_008897936.1| (ATP-dependent protease La [Phytophthora parasitica INRA-310] >gi|568102155|gb|ETN16837.1| ATP-dependent protease La [Phytophthora parasitica INRA-310] >gi|570967498|gb|ETP30617.1| ATP-dependent protease La [Phytophthora parasitica P10297]) HSP 1 Score: 140.198 bits (352), Expect = 1.783e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|567947154|gb|ETK72946.1| (ATP-dependent protease La [Phytophthora parasitica] >gi|567975854|gb|ETL26390.1| ATP-dependent protease La [Phytophthora parasitica] >gi|570313391|gb|ETO61339.1| ATP-dependent protease La [Phytophthora parasitica P1976] >gi|570937157|gb|ETP02414.1| ATP-dependent protease La [Phytophthora parasitica CJ01A1]) HSP 1 Score: 140.198 bits (352), Expect = 1.783e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|566009666|gb|ETI32577.1| (ATP-dependent protease La [Phytophthora parasitica P1569]) HSP 1 Score: 140.198 bits (352), Expect = 1.800e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|568035205|gb|ETM32857.1| (ATP-dependent protease La [Phytophthora parasitica]) HSP 1 Score: 140.198 bits (352), Expect = 1.817e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|568005309|gb|ETL79611.1| (ATP-dependent protease La [Phytophthora parasitica]) HSP 1 Score: 140.198 bits (352), Expect = 1.835e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|970654621|gb|KUF92912.1| (Lon protease [Phytophthora nicotianae]) HSP 1 Score: 139.813 bits (351), Expect = 2.297e-35 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ ++DP S LI+AYSNE
Sbjct: 55 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 214
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|301099514|ref|XP_002898848.1| (lon protease, putative [Phytophthora infestans T30-4] >gi|262104554|gb|EEY62606.1| lon protease, putative [Phytophthora infestans T30-4]) HSP 1 Score: 139.428 bits (350), Expect = 2.737e-35 Identity = 73/160 (45.62%), Postives = 105/160 (65.62%), Query Frame = 0
Query: 3 GAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ +DP S LI+AYSNE
Sbjct: 78 GVEVVIDNDLATVGEGDNAPTYPHVLAVPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSTGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPTFDPKSKLIRAYSNE 236
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|63086953|emb|CAI72282.1| (Lon protease, putative [Phytophthora infestans]) HSP 1 Score: 139.428 bits (350), Expect = 3.492e-35 Identity = 73/161 (45.34%), Postives = 105/161 (65.22%), Query Frame = 0
Query: 2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
G E + +A VG G+NAP +PHVLA+P +RRPFFPG+V + IT+P+V A+ ++K + G YVG FL+K DP G +++ +LS+I+ G+ A++ N +P QV++VS RRI ID GPPLRV +S+L+ +DP S LI+AYSNE
Sbjct: 77 DGVEVVIDNDLATVGEGDNAPTYPHVLAVPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSTGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPTFDPKSKLIRAYSNE 236
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|953501589|emb|CEG37038.1| (atp-dependent protease la [Plasmopara halstedii]) HSP 1 Score: 129.798 bits (325), Expect = 8.308e-32 Identity = 70/164 (42.68%), Postives = 104/164 (63.41%), Query Frame = 0
Query: 4 AETSTLDAVAK-----VGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
A++ ++ V K VG G+NAP +PHVL +P +RRPFFPG+V + I++P+ A+ ++K + G YVG FL+K DP G + I +LS+I+ G+ A++ N +P QV++VS RRI ID GPP+RV +S+L+ +DP S LI+AYSNE
Sbjct: 47 ADSDNVEVVIKNDLVTVGEGDNAPTYPHVLVMPALRRPFFPGVVLPMTISNPETTRALMALK-ESGQKYVGVFLKKSNGDPLKSGGGEDEIKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDSLRDEGPPIRVNISNLDSPPFDPKSKLIRAYSNE 209 The following BLAST results are available for this feature:
BLAST of EWM26994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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