EWM26994.1, cds3679 (CDS) Nannochloropsis gaditana

Overview
NameEWM26994.1
Unique Namecds3679
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:984063..984536 -
Alignment locationCM002461.1:983838..983852 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26994.1
Productmitochondrial serine protease
Orig transcript idgnl|cribi|Naga_101275g1.3017.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:984063..984536 -
CM002461.1supercontigCM002461.1:983838..983852 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004252serine-type endopeptidase activity
GO:0004176ATP-dependent peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0030163protein catabolic process
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_domain
IPR027065Lon_Prtase
IPR003111Pept_S16_N
Homology
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|585109163|gb|EWM26994.1| (mitochondrial serine protease [Nannochloropsis gaditana])

HSP 1 Score: 335.109 bits (858), Expect = 2.107e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query:    1 MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW 162
            MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW
Sbjct:    1 MSGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKEDPGEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGGQVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNECGNW 162          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|675178103|ref|XP_008897936.1| (ATP-dependent protease La [Phytophthora parasitica INRA-310] >gi|568102155|gb|ETN16837.1| ATP-dependent protease La [Phytophthora parasitica INRA-310] >gi|570967498|gb|ETP30617.1| ATP-dependent protease La [Phytophthora parasitica P10297])

HSP 1 Score: 140.198 bits (352), Expect = 1.783e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|567947154|gb|ETK72946.1| (ATP-dependent protease La [Phytophthora parasitica] >gi|567975854|gb|ETL26390.1| ATP-dependent protease La [Phytophthora parasitica] >gi|570313391|gb|ETO61339.1| ATP-dependent protease La [Phytophthora parasitica P1976] >gi|570937157|gb|ETP02414.1| ATP-dependent protease La [Phytophthora parasitica CJ01A1])

HSP 1 Score: 140.198 bits (352), Expect = 1.783e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|566009666|gb|ETI32577.1| (ATP-dependent protease La [Phytophthora parasitica P1569])

HSP 1 Score: 140.198 bits (352), Expect = 1.800e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|568035205|gb|ETM32857.1| (ATP-dependent protease La [Phytophthora parasitica])

HSP 1 Score: 140.198 bits (352), Expect = 1.817e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|568005309|gb|ETL79611.1| (ATP-dependent protease La [Phytophthora parasitica])

HSP 1 Score: 140.198 bits (352), Expect = 1.835e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   79 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 238          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|970654621|gb|KUF92912.1| (Lon protease [Phytophthora nicotianae])

HSP 1 Score: 139.813 bits (351), Expect = 2.297e-35
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+  ++DP S LI+AYSNE
Sbjct:   55 EGVEILIENDLATVGEGDNAPTYPHVLAMPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSSGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPSFDPKSKLIRAYSNE 214          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|301099514|ref|XP_002898848.1| (lon protease, putative [Phytophthora infestans T30-4] >gi|262104554|gb|EEY62606.1| lon protease, putative [Phytophthora infestans T30-4])

HSP 1 Score: 139.428 bits (350), Expect = 2.737e-35
Identity = 73/160 (45.62%), Postives = 105/160 (65.62%), Query Frame = 0
Query:    3 GAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
            G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+   +DP S LI+AYSNE
Sbjct:   78 GVEVVIDNDLATVGEGDNAPTYPHVLAVPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSTGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPTFDPKSKLIRAYSNE 236          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|63086953|emb|CAI72282.1| (Lon protease, putative [Phytophthora infestans])

HSP 1 Score: 139.428 bits (350), Expect = 3.492e-35
Identity = 73/161 (45.34%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    2 SGAETSTLDAVAKVGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
             G E    + +A VG G+NAP +PHVLA+P +RRPFFPG+V  + IT+P+V  A+ ++K + G  YVG FL+K   DP   G   +++ +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPPLRV +S+L+   +DP S LI+AYSNE
Sbjct:   77 DGVEVVIDNDLATVGEGDNAPTYPHVLAVPALRRPFFPGVVLPMTITNPEVTRALMALK-ESGQKYVGVFLKKSTGDPLKSGGGEDLVKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPTFDPKSKLIRAYSNE 236          
BLAST of EWM26994.1 vs. NCBI_GenBank
Match: gi|953501589|emb|CEG37038.1| (atp-dependent protease la [Plasmopara halstedii])

HSP 1 Score: 129.798 bits (325), Expect = 8.308e-32
Identity = 70/164 (42.68%), Postives = 104/164 (63.41%), Query Frame = 0
Query:    4 AETSTLDAVAK-----VGAGENAPRHPHVLALPIMRRPFFPGLVQAVNITSPKVFEAISSIKNDYGHYYVGTFLRKE--DP-GEGSPPEVITDLSQIYQTGTLAQVQNTIPLGMGG-QVVLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNE 158
            A++  ++ V K     VG G+NAP +PHVL +P +RRPFFPG+V  + I++P+   A+ ++K + G  YVG FL+K   DP   G   + I +LS+I+  G+ A++ N +P      QV++VS RRI ID     GPP+RV +S+L+   +DP S LI+AYSNE
Sbjct:   47 ADSDNVEVVIKNDLVTVGEGDNAPTYPHVLVMPALRRPFFPGVVLPMTISNPETTRALMALK-ESGQKYVGVFLKKSNGDPLKSGGGEDEIKNLSEIHHVGSFARIDNMLPFDANSVQVLMVSQRRIAIDSLRDEGPPIRVNISNLDSPPFDPKSKLIRAYSNE 209          
The following BLAST results are available for this feature:
BLAST of EWM26994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109163|gb|EWM26994.1|2.107e-116100.00mitochondrial serine protease [Nannochloropsis gad... [more]
gi|675178103|ref|XP_008897936.1|1.783e-3545.34ATP-dependent protease La [Phytophthora parasitica... [more]
gi|567947154|gb|ETK72946.1|1.783e-3545.34ATP-dependent protease La [Phytophthora parasitica... [more]
gi|566009666|gb|ETI32577.1|1.800e-3545.34ATP-dependent protease La [Phytophthora parasitica... [more]
gi|568035205|gb|ETM32857.1|1.817e-3545.34ATP-dependent protease La [Phytophthora parasitica... [more]
gi|568005309|gb|ETL79611.1|1.835e-3545.34ATP-dependent protease La [Phytophthora parasitica... [more]
gi|970654621|gb|KUF92912.1|2.297e-3545.34Lon protease [Phytophthora nicotianae][more]
gi|301099514|ref|XP_002898848.1|2.737e-3545.63lon protease, putative [Phytophthora infestans T30... [more]
gi|63086953|emb|CAI72282.1|3.492e-3545.34Lon protease, putative [Phytophthora infestans][more]
gi|953501589|emb|CEG37038.1|8.308e-3242.68atp-dependent protease la [Plasmopara halstedii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3688rna3688Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications