EWM27013.1, cds3675 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 1293.1 bits (3345), Expect = 0.000e+0 Identity = 627/627 (100.00%), Postives = 627/627 (100.00%), Query Frame = 0 Query: 1 MCMSCVEQGVMPVQKELSDLEHGPANAAGSVAMEKALPQTPMEGRKGEDHVLDFNVSNFSTPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627 MCMSCVEQGVMPVQKELSDLEHGPANAAGSVAMEKALPQTPMEGRKGEDHVLDFNVSNFSTPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL Sbjct: 1 MCMSCVEQGVMPVQKELSDLEHGPANAAGSVAMEKALPQTPMEGRKGEDHVLDFNVSNFSTPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 486.108 bits (1250), Expect = 7.000e-161 Identity = 267/601 (44.43%), Postives = 374/601 (62.23%), Query Frame = 0 Query: 51 VLDFNVSNFSTPKGKQ----ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAK--------PG-------AEVQGKTAVWIVENFA--------KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQ-AHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRY 623 VL++N+S + K+ +L IAGR G F A+MGPSG GKT+L+ C+ALR R FEG++ ++G++ YF TGYVHQKELFF LT REHLVFHA+N L + ++C+ RV+ V+ EV+L + D IGGG+ LV G+SGGERKRL+I TELL +P+I+ LDEPTSGLDSVMGELV LL ++A PRR+++ IHTPSSR+++ SHV LL + G +AY G R+ L + + LGY P +NPADF LE+ SAK PG A + +VE+ + K + P N+ V G + + + + N+WR+ R+ L V M LG+VFG+L+ Q H + RN G +F+L+V +LI S+ V + FP +++I MREYY G N+ YF+GRT+A P F+++ I+PY+M GL S +F YC +FF++ + S GYLASSFSA+PV+GL+I P+ TPMILFSGMLYER+SVP L+WIQ+ISV+NY FA +V+N+ + DGP R ++ FLQI F + L L++ YR A+ VL +R+++ Sbjct: 74 VLEWNISKYEIKLKKRKSLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGDLYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAV---QAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHI-DGPARSFLIDFLQIKDSDFPGFLIALVSLSILYRVAAMGVLWVRVKF 670
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 473.011 bits (1216), Expect = 9.961e-158 Identity = 248/548 (45.26%), Postives = 350/548 (63.87%), Query Frame = 0 Query: 84 MGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGE-FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGA---EVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGT--LYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYAT 625 MGPSGAGKTTL++CI+LR R FEGA+H D R P ++FT + VHQKEL F +T REHL+FHAI R+ +T +Q RV+EV+ EV+L +CADTI+GG + + KGLSGGERKRLSI ELL P++IFLDEP+SGLDSVM E + L L R+++ +H PSS M F+HVLLL G +AYHG ++A YF SL Y P NYNP+DF L+++SA PGA + + + + A M + L P+ H F V G + + L K+N+WRA Q RD T L+ LV L+ G +FG+L+ QA S+WRNL+G++F++VVA L S+ V ++FP++W+I +REY++G+NA+GPY + R I D P LL+ + YWM+G+ + F+ + F S S G SSFSA+P +GL I P PMI+FSG+LYERSSVP +L W+Q +S+VNY F+AL+I + + L P+ LV+ F++++ G IG L+ + G++ +++ L LR+R+AT Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG-----RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVF---GHASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALV--GGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPK-PLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 442.195 bits (1136), Expect = 7.439e-145 Identity = 234/587 (39.86%), Postives = 360/587 (61.33%), Query Frame = 0 Query: 47 GEDHVLDFNVSNFSTPKGKQ-----ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGE-FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGML-LILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATS 626 G H L+++V + P GK+ IL IAG+T +G+ TA+MGPSG GKTTL++CI+LR R F+GA+H DGR+P D FT + VHQKEL F +T RE+L FH + R+ +T+ Q +R+ EV+++++L +CADT++GG + F KGLSGGERKRL+I E+L P +IFLDEP+SGLDSVM E + L LA G R+++ +H PSS FSH++LL G +AYHG YF +L Y P +YNPADF L+++S PGAE +G+ + N A + + P + G+A G A K+N WRA + RDK T L G++ I+G++ G+++L QA +SWRNL+G++F+LVVA + + S+ V ++FP EW+I +RE Y+G NA+GPY +P LLV V YWM+G+ +F +++++ I+ G SS S +P++G+ I P PMI+FSG+LY++S+VP++L W+ ++S++NY F+AL+ + + L + L+ F+ ++ G + +L+ ++ ++ L +R+R AT+ Sbjct: 21 GIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGG-----RIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDK-TFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQAN-LLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNATA 600
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 421.779 bits (1083), Expect = 2.816e-136 Identity = 231/592 (39.02%), Postives = 350/592 (59.12%), Query Frame = 0 Query: 67 ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGG--------------------------KYTKDQCMKRVDEVINEVELARCADTIIGGGEFAL-VKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFA---KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627 IL +AG V+GE TA++GPSGAGKTTL++CI+LR R+F+G + DG++P+ +FT + +VHQ ++ + LT REHL FHAI R+ G K + + +RV+EVI V+L +CADT+IGG + VKG+SGGERKRL+I TELL +IIFLDEP+SGLDSVM E + L L T R+++ +H PSS+ + FS+++LL G +AY G YF++ LG + P +YNPADF LE+VSA+PG +Q + + A M+ N LP + H V G GA + K+N+WR Q +RD+ TL + ++G +FG+L+ A S+WRNLMG++F+ VV + + V ++FP+EW++ +RE+ +GANA+GPY I R +P +L+ + YW +G+ +++ + IF S G SSFSA+P++ + I P TPMI+FSG+L ERSSVP++L WI+++SVVNY F L+ + + L G +V F+Q + G +G L+ L ++ +++ L++R+R + S+ Sbjct: 61 ILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG-----RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVR---GQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHIL-PGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSV 643
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 421.394 bits (1082), Expect = 3.102e-136 Identity = 231/592 (39.02%), Postives = 350/592 (59.12%), Query Frame = 0 Query: 67 ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGG--------------------------KYTKDQCMKRVDEVINEVELARCADTIIGGGEFAL-VKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFA---KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627 IL +AG V+GE TA++GPSGAGKTTL++CI+LR R+F+G + DG++P+ +FT + +VHQ ++ + LT REHL FHAI R+ G K + + +RV+EVI V+L +CADT+IGG + VKG+SGGERKRL+I TELL +IIFLDEP+SGLDSVM E + L L T R+++ +H PSS+ + FS+++LL G +AY G YF++ LG + P +YNPADF LE+VSA+PG +Q + + A M+ N LP + H V G GA + K+N+WR Q +RD+ TL + ++G +FG+L+ A S+WRNLMG++F+ VV + + V ++FP+EW++ +RE+ +GANA+GPY I R +P +L+ + YW +G+ +++ + IF S G SSFSA+P++ + I P TPMI+FSG+L ERSSVP++L WI+++SVVNY F L+ + + L G +V F+Q + G +G L+ L ++ +++ L++R+R + S+ Sbjct: 61 ILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG-----RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVR---GQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHIL-PGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSV 643
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 421.009 bits (1081), Expect = 4.032e-136 Identity = 241/578 (41.70%), Postives = 354/578 (61.25%), Query Frame = 0 Query: 65 KQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGG-GEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGA-----EVQGKTAVWIVENFA----------KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLL-ILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYA 624 K IL D+AG++V GE TA+MG SGAGKTTL++C+ALR R F+G + +G + + DYFT + VHQ+E+ LT EHL+FH R+ +++ + RV VI +V L++C T++GG G KGLSGGERKRL+I TELL P+ IFLDEPT+ LDSVM V LL LA + R ++M IH PSS+++S FSHVLLL G +A+HGT Y S L +P YNPAD + +V +KPG E + K W+V++FA +R ++ E +H + GV G A ++N+ R + Q+SR+ + + L GM++ ++G+ FG L+ QA SSWRNL+G+++ALVVA+L +C + V L+ P++W + +REY+ GANA GPY + + + ++PF LLLV YWM+GLT S A+F+++ + L S + + S SA+P+L L I P TPM+LFSG LY+ +++P YL W+ IS+VNYGFAAL+ + SL +R + L F+ +D GA + L G+ + + +++ L LR+R A Sbjct: 67 KSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSR----RILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQ---GQHASAWTLFRLNLRRGLLQTSRNSLSFW-LYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQ-QSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 355.525 bits (911), Expect = 3.690e-110 Identity = 212/593 (35.75%), Postives = 324/593 (54.64%), Query Frame = 0 Query: 44 GRKGEDHVLDFNVSNFSTPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALE-----VVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPET--NHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQA--HSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALF-LLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGP-MRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYA 624 G +G N S S + IL+++ G G+ ALMG SGAGK++L+DCI+LR FEG +++D + +F+ + YVHQ +LFF++LT REHL FHA+ R+ + ++RV+EVI+ V L + AD++IGG + A ++G+SGGERKRLS+ TELLS P+IIF DEPTSGLD+ M V +L LA R++ CVIH PSS ++ F+H++LLA G AY GTR YF S LG + P YNPAD+ +E V+ KP V+ V+ A+ E + ET + + +S A Q + R V R+ +G + +G++ GL++L Q S+ +N +G MF L++ I V+ P + ++FMREY T AN YF+G ++A++P+ LF + + YW+ G + F + L+ N S S GY S+ + + +A+ PV+ PM L++G+L+ VP Y + +S++ Y F A+V+NE S P +R V ++ + G G CI L L G+RF +++ L +R + A Sbjct: 98 GGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQ-AFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSG-----RLVACVIHQPSSEIFELFTHLMLLARGQ-TAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 683
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|553179694|ref|XP_005852746.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295790|gb|EKU23089.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 353.599 bits (906), Expect = 9.074e-109 Identity = 211/593 (35.58%), Postives = 324/593 (54.64%), Query Frame = 0 Query: 44 GRKGEDHVLDFNVSNFSTPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALE-----VVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPET--NHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQA--HSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALF-LLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGP-MRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYA 624 G +G N S S + IL+++ G G+ ALMG SGAGK++L+DCI+LR F+G +++D + +F+ + YVHQ +LFF++LT REHL FHA+ R+ + ++RV+EVI+ V L + AD++IGG + A ++G+SGGERKRLS+ TELLS P+IIF DEPTSGLD+ M V +L LA R++ CVIH PSS ++ F+H++LLA G AY GTR YF S LG + P YNPAD+ +E V+ KP V+ V+ A+ E + ET + + +S A Q + R V R+ +G + +G++ GL++L Q S+ +N +G MF L++ I V+ P + ++FMREY T AN YF+G ++A++P+ LF + + YW+ G + F + L+ N S S GY S+ + + +A+ PV+ PM L++G+L+ VP Y + +S++ Y F A+V+NE S P +R V ++ + G G CI L L G+RF +++ L +R + A Sbjct: 166 GGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFDGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQ-AFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSG-----RLVACVIHQPSSEIFELFTHLMLLARGQ-TAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 751
BLAST of EWM27013.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 337.806 bits (865), Expect = 6.496e-104 Identity = 206/580 (35.52%), Postives = 322/580 (55.52%), Query Frame = 0 Query: 65 KQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGEFALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALA-TGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPG------AEVQGKTAVWIVENFAKRMEKF-NRLPPE--TNHHTFTGVATSGGTGAGYLLQTKMNIW----RAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQ--AHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALF-LLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINE-------CNSLGDGPMRW--LVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLK 618 K IL + G +G ALMG SGAGK++L+DCI+LR + FEG + VDG+ + +F T YV+Q +LFF +LT REHL FHA+ R+ +RV+ ++ +V L C+D +IGG +L++G+SGGERKR+++ TELLS+P I+FLDEPTSGLDS M E V LL LA TGK +++CVIH PSS + F+H+ LLA G MAY G YF +LG+ PPN+NPADF +E ++ P A ++ T + + K+ EK+ +++ P + TG+A + Y W R + Q R+ A + +++G++ GL++ +Q + + +N +G+ F + + I + V + P ++++FMREY GAN + YF+ RT+++IPF LF L+ + Y M GL + ++I +C + L N + S GY S+ + +A V+ PM LFSG+L + ++ +L+ +Q +S++ Y + A++INE C P R VL ++ +G LF L +R +F+ LK Sbjct: 67 KTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGAS-SLIRGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGK------IVVCVIHQPSSDTFKLFTHLCLLAKGR-MAYLGELPKAVDYFAALGHACPPNFNPADFFIEELAVVPSDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAIT-----EYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINCGFNVICPFRTGNAVLTYVGAAPDELSFNMGMLFVFMLCFRLVAFMALK 633 The following BLAST results are available for this feature:
BLAST of EWM27013.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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