EWM27002.1, cds3669 (CDS) Nannochloropsis gaditana

Overview
NameEWM27002.1
Unique Namecds3669
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:957530..957532 -
Alignment locationCM002461.1:957065..957134 -
Alignment locationCM002461.1:956593..956923 -
Alignment locationCM002461.1:955948..956311 -
Alignment locationCM002461.1:955272..955727 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27002.1
Productcysteine synthase
Orig transcript idgnl|cribi|Naga_100079g12.10191.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:957530..957532 -
CM002461.1supercontigCM002461.1:957065..957134 -
CM002461.1supercontigCM002461.1:956593..956923 -
CM002461.1supercontigCM002461.1:955948..956311 -
CM002461.1supercontigCM002461.1:955272..955727 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006535cysteine biosynthetic process from serine
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0004124cysteine synthase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR001216P-phosphate_BS
IPR001926TrpB-like_PLP-dep
IPR005856Cys_synth
IPR005859CysK
Homology
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|585109172|gb|EWM27002.1| (cysteine synthase [Nannochloropsis gaditana])

HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0
Query:    1 MLPRATRHRMKRQSLIAVIAVASTASAFVAPGYHAARLAAAAAITRTSSKYRSMSSSPSSANRGTTSTNAQSNGHARGPSMLFERPKVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKMVTSDS 407
            MLPRATRHRMKRQSLIAVIAVASTASAFVAPGYHAARLAAAAAITRTSSKYRSMSSSPSSANRGTTSTNAQSNGHARGPSMLFERPKVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKMVTSDS
Sbjct:    1 MLPRATRHRMKRQSLIAVIAVASTASAFVAPGYHAARLAAAAAITRTSSKYRSMSSSPSSANRGTTSTNAQSNGHARGPSMLFERPKVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKMVTSDS 407          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|219114471|ref|XP_002176406.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402652|gb|EEC42642.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 459.529 bits (1181), Expect = 7.818e-159
Identity = 235/316 (74.37%), Postives = 273/316 (86.39%), Query Frame = 0
Query:   87 KVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            K+A +V  LIG TPLV+LNRVT GC A+++AKLES  P NSVKDRIA SMITEAE RG+I PGKT+LVEPTSGNTGIGLAMVAAAKGY+L LTMPESMSMERRVLLKAFGA++VLT A+KGM GAIAKA+EIV+SLG  A +LQQF NPDNPK+H ETTGPEIW+DTDG+VDI+VGG+GTGGT+TGCAQYLK     L  VAVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q+S E+S+ MAR++A +EG+  GISSGAAV AAI++G RPENA+K+IVVIIPSFGERYLSTALFQ LWD+ A +
Sbjct:   14 KIAENVLGLIGQTPLVQLNRVTEGCVAQIVAKLESSNPANSVKDRIALSMITEAEKRGDIKPGKTILVEPTSGNTGIGLAMVAAAKGYKLKLTMPESMSMERRVLLKAFGADVVLTPAAKGMGGAIAKAEEIVNSLGSDAMLLQQFNNPDNPKVHRETTGPEIWSDTDGEVDIIVGGIGTGGTITGCAQYLKPLNPKLQVVAVEPTESAVLSGGKPGPHKIQGIGAGFIPGNADTSLLDEVVQISGEDSMAMARKMATEEGIFCGISSGAAVLAAIQIGKRPENADKRIVVIIPSFGERYLSTALFQDLWDEMAAL 329          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|397584861|gb|EJK53101.1| (hypothetical protein THAOC_27524 [Thalassiosira oceanica])

HSP 1 Score: 456.062 bits (1172), Expect = 3.572e-157
Identity = 232/316 (73.42%), Postives = 268/316 (84.81%), Query Frame = 0
Query:   87 KVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            K+A +V +LIG TPLV+LN+VT GC AE++AKLES  P NSVKDRIA SMI EAE RG+I PGK+ LVEPTSGNTGIGLAMVAA+KGY+LILTMPESMSMERRVLLKAFGA + LT A+KGM GAI+KA+E+VDSLG   F+LQQF NPDNPKIH ETTGPEIW DTDG+VDIL+GGVGTGGT+TGC QYLK R   L  VAVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q+S E+++ MAR LA +EG+  GISSGAAV AAI VG RPE+A K+IV++IPSFGERYLSTALFQ LWD+AA +
Sbjct:   37 KIAENVLDLIGGTPLVKLNKVTAGCGAEIVAKLESSNPANSVKDRIALSMINEAEARGDITPGKSTLVEPTSGNTGIGLAMVAASKGYKLILTMPESMSMERRVLLKAFGAEVKLTPAAKGMGGAISKAEEVVDSLGSDGFLLQQFNNPDNPKIHRETTGPEIWADTDGKVDILLGGVGTGGTITGCGQYLKPRNPDLKIVAVEPTESAVLSGGKPGPHKIQGIGAGFIPGNADTSLIDEVIQISGEDAMAMARRLATEEGIFCGISSGAAVCAAIEVGKRPESAGKRIVLVIPSFGERYLSTALFQNLWDEAAAL 352          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|1210522896|dbj|GAX18366.1| (cysteine synthase A [Fistulifera solaris])

HSP 1 Score: 455.677 bits (1171), Expect = 5.729e-157
Identity = 237/316 (75.00%), Postives = 267/316 (84.49%), Query Frame = 0
Query:   87 KVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            K+AN+V ELIGNTPLV+LNRVT G  AEV+ KLES  P NSVKDRIA SMITEAE RG+I PGKTVLVEPTSGNTGIGLAMVAAAKGY+L LTMPESMSMERRVLLKAFGA ++LT A+KGM GAIAKA+EIV+SLG    +LQQF NPDNPKIH ETTGPEIWTDTDG+VDILVGGVGTGGT+TGC QYLK    SL  VAVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q++ E+++ MAR +A +EG+  GISSGAAV AA +V  RPENA K+IV IIPSFGERYLSTALFQ LWD+A  +
Sbjct:   35 KIANNVLELIGNTPLVKLNRVTEGSVAEVVVKLESSNPANSVKDRIALSMITEAEARGDITPGKTVLVEPTSGNTGIGLAMVAAAKGYKLKLTMPESMSMERRVLLKAFGAEVILTPAAKGMGGAIAKAEEIVNSLGPDGMLLQQFNNPDNPKIHRETTGPEIWTDTDGKVDILVGGVGTGGTLTGCGQYLKPLNPSLQIVAVEPMESAVLSGGKPGPHKIQGIGAGFIPGNADTSLIDEVVQIAGEDAMAMARRMALEEGIFCGISSGAAVLAASQVAKRPENAGKRIVAIIPSFGERYLSTALFQNLWDEATAL 350          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|1210512763|dbj|GAX28220.1| (cysteine synthase A [Fistulifera solaris])

HSP 1 Score: 454.521 bits (1168), Expect = 1.824e-156
Identity = 235/316 (74.37%), Postives = 267/316 (84.49%), Query Frame = 0
Query:   87 KVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            K+AN++ ELIGNTPLV+LNRVT G  AEV+ KLES  P NSVKDRIA SMITEAE RG+I PGKTVLVEPTSGNTGIGLAMVAAAKGY+L LTMPESMSMERRVLLKAFGA ++LT A+KGM GAIAKA+EIV+SLG    +LQQF NPDNPKIH ETTGPEIWTDTDG++DILVGGVGTGGT+TGC QYLK    SL  VAVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q++ E+++ MAR +A +EG+  GISSGAAV AA +V  RPENA K+IV IIPSFGERYLSTALFQ LWD+A  +
Sbjct:   35 KIANNILELIGNTPLVKLNRVTEGSVAEVVVKLESSNPANSVKDRIALSMITEAEARGDITPGKTVLVEPTSGNTGIGLAMVAAAKGYKLKLTMPESMSMERRVLLKAFGAEVILTPAAKGMGGAIAKAEEIVNSLGPDGMLLQQFNNPDNPKIHRETTGPEIWTDTDGKIDILVGGVGTGGTLTGCGQYLKPLNPSLQIVAVEPMESAVLSGGKPGPHKIQGIGAGFIPGNADTSLIDEVVQIAGEDAMAMARRMALEEGIFCGISSGAAVLAASQVAKRPENAGKRIVAIIPSFGERYLSTALFQNLWDEATAL 350          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|223996381|ref|XP_002287864.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976980|gb|EED95307.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 450.669 bits (1158), Expect = 6.085e-155
Identity = 243/368 (66.03%), Postives = 293/368 (79.62%), Query Frame = 0
Query:   38 LAAAAAITRTSSKYRSMSSSPSSANRGTTSTNAQSNGHARGPSMLF--ERPKVANDVTELIGNTPLVRLNRVT-VGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            L A+ A+   +S +     SPSS    T++  + +N      + LF   RPK+A +V ELIG+TPLV++ +VT   C AEV+AKLES  P NSVKDRIA SMI EAE RG+I+PGK+ LVEPTSGNTGIGLAMVAA+KGY+LILTMPESMSMERRVLLKAFGA++ LT A+KGM GAIAKA+EIVDSLG   ++LQQF NPDNPK+H ETTGPEIW DTDG++DIL+GGVGTGGT+TGC QYLK R   +  VAVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q+S E+++ MAR+LA  EG+  GISSGAA+ AA  VGSRPENA+K+IVVI+PSFGERYLSTALFQ LWD+A+ +
Sbjct:    4 LLASMALLGAASAFVPSHVSPSSI---TSTIGSGAN------TQLFTEPRPKIAENVLELIGHTPLVKITKVTGPSCVAEVVAKLESSNPANSVKDRIALSMIQEAEARGDISPGKSTLVEPTSGNTGIGLAMVAASKGYKLILTMPESMSMERRVLLKAFGADVKLTPAAKGMGGAIAKAEEIVDSLGPDGYLLQQFNNPDNPKVHRETTGPEIWEDTDGKIDILLGGVGTGGTLTGCGQYLKPRNPDMKIVAVEPAESAVLSGGKPGPHKIQGIGAGFIPGNADTSLIDEVVQISGEDAMAMARKLATDEGIFCGISSGAAILAAKEVGSRPENADKRIVVILPSFGERYLSTALFQNLWDEASAL 362          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|676391893|ref|XP_009039224.1| (hypothetical protein AURANDRAFT_59252 [Aureococcus anophagefferens] >gi|323450079|gb|EGB05962.1| hypothetical protein AURANDRAFT_59252 [Aureococcus anophagefferens])

HSP 1 Score: 445.662 bits (1145), Expect = 1.682e-153
Identity = 224/323 (69.35%), Postives = 268/323 (82.97%), Query Frame = 0
Query:   81 MLFERPKVANDVTELIGNTPLVRLNRVTVG-CQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            M F++ K+A D+TELIG TP+ +L +V    CQAE++ KLESMEPCNSVKDRI  SMI EAE RG+IAPGKT LVEPTSGNTGI LAMVAA+KGY+++LTMPESMSMERRVLLKAFGA+LVLT A+KGM GA+ KA+++V S+GDK ++LQQF NPDNPK+H ETTGPEIW  TDG +D+L+GGVGTGGT+TG AQ+LK  K SL  +AVEP ESAVL+G  PGPHKIQGIGAGF+P NAD S+FDE+ Q++S ++IDMAR +AK+EG+  GISSGAAV AA  VG R +   K+IVVIIPSFGERYLST LFQ LWD+A  M
Sbjct:    1 MAFDKSKIAEDITELIGGTPMCKLRKVQGDKCQAEIVVKLESMEPCNSVKDRIGLSMIAEAEKRGDIAPGKTTLVEPTSGNTGIALAMVAASKGYDIVLTMPESMSMERRVLLKAFGADLVLTPAAKGMGGAVKKAEDLVASMGDKGYLLQQFNNPDNPKVHRETTGPEIWEQTDGNIDVLLGGVGTGGTITGSAQFLKPLKPSLQVIAVEPAESAVLTGGAPGPHKIQGIGAGFIPGNADTSLFDEVVQIASGDAIDMARRMAKEEGIFCGISSGAAVLAAKIVGERDDMKGKRIVVIIPSFGERYLSTMLFQNLWDEAQLM 323          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|298714094|emb|CBJ33850.1| (Cysteine synthase [Ectocarpus siliculosus])

HSP 1 Score: 443.736 bits (1140), Expect = 1.774e-152
Identity = 226/332 (68.07%), Postives = 268/332 (80.72%), Query Frame = 0
Query:   76 ARGP-SMLFERPKVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKMVTSD 406
            A GP + + E+P +A+D+T+LIG TPLVRLNRVT GC+A +LAKLESMEPCNSVKDRI  SMI EAE RG+I PG T LVEPTSGNTGI  AMVAAA+GY+++LTMP+SMS+ERRVLLKAFGA LVLT A+KGM GA+AKA+ IV  LG+ AFMLQQF NPDNPKIH ETTGPE+WT T G++D LV GVGTGGT+TG  QYLK  K ++   AVEP ESAVLSG +PGPHKIQGIGAGF+P N D S+ DE+ +V+S+ES+ MARELAKKEGLLVGIS+G AV AA+ +  +PE   K I V+IPSFGERYLSTALF  + D+A +    D
Sbjct:   14 AAGPDAKVLEQPLIADDITQLIGKTPLVRLNRVTEGCEATILAKLESMEPCNSVKDRIGLSMIDEAEKRGQIKPGVTTLVEPTSGNTGIACAMVAAARGYDMVLTMPDSMSLERRVLLKAFGARLVLTPATKGMGGAVAKAEAIVSDLGENAFMLQQFNNPDNPKIHRETTGPELWTQTAGKIDALVAGVGTGGTLTGSGQYLKVMKPAVKLCAVEPVESAVLSGGKPGPHKIQGIGAGFIPGNCDTSLIDEVLKVTSDESMAMARELAKKEGLLVGISAGGAVHAALDLAKKPEMKGKTICVVIPSFGERYLSTALFSNILDEAKEQKAED 345          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|1072233806|gb|OEU18536.1| (putative cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (thiol)-lyase) (OAS-TL) [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 442.58 bits (1137), Expect = 1.055e-151
Identity = 226/316 (71.52%), Postives = 264/316 (83.54%), Query Frame = 0
Query:   87 KVANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            K+A+++ ELIG TPLV+L ++  GC+AE++ KLES  P NSVKDRIA SMITEAE RG+I+PGK VLVEPTSGNTGIGLAMVAA+KGY+LILTMPESMSMERRVLLKAFGA LVLT A+KGM GAIAKA+EI     D  ++LQQF NPDNPKIH ETTGPEIW DTDG+VDILVGGVGTGGT+TGC QYLK    S+  +AVEP ESAVLSG +PGPHKIQGIGAGF+P NAD S+ DE+ Q+S E++++MAR +A +EG+  GISSGAAV AA +V  RPEN  K+IV IIPSFGERYLSTALFQ LWD+A+ M
Sbjct:   44 KIADNILELIGGTPLVKLTKLAEGCEAEIVCKLESSNPANSVKDRIALSMITEAEKRGDISPGKNVLVEPTSGNTGIGLAMVAASKGYDLILTMPESMSMERRVLLKAFGAKLVLTPAAKGMGGAIAKAEEIATM--DGGYLLQQFNNPDNPKIHRETTGPEIWADTDGKVDILVGGVGTGGTLTGCGQYLKPLNPSMQIIAVEPTESAVLSGGKPGPHKIQGIGAGFIPGNADTSLLDEVIQISGEDAMEMARNMATQEGIFCGISSGAAVLAATQVAKRPENKGKRIVAIIPSFGERYLSTALFQNLWDEASNM 357          
BLAST of EWM27002.1 vs. NCBI_GenBank
Match: gi|159467511|ref|XP_001691935.1| (cysteine synthase [Chlamydomonas reinhardtii] >gi|158278662|gb|EDP04425.1| cysteine synthase [Chlamydomonas reinhardtii])

HSP 1 Score: 430.254 bits (1105), Expect = 6.290e-147
Identity = 219/315 (69.52%), Postives = 261/315 (82.86%), Query Frame = 0
Query:   88 VANDVTELIGNTPLVRLNRVTVGCQAEVLAKLESMEPCNSVKDRIAYSMITEAENRGEIAPGKTVLVEPTSGNTGIGLAMVAAAKGYELILTMPESMSMERRVLLKAFGANLVLTVASKGMKGAIAKAQEIVDSLGDKAFMLQQFENPDNPKIHLETTGPEIWTDTDGQVDILVGGVGTGGTMTGCAQYLKGRKSSLITVAVEPRESAVLSGDQPGPHKIQGIGAGFVPRNADMSMFDEIQQVSSEESIDMARELAKKEGLLVGISSGAAVTAAIRVGSRPENANKKIVVIIPSFGERYLSTALFQTLWDDAAKM 402
            +A DVTELIG TP+V LN+V  G  A++ AKLE MEPC SVKDRI YSMI+ AE  G I PGKTVLVEPTSGNTGIGLA +AAA+GY+LILTMP SMS+ERR+LL+AFGA LVLT  +KGMKGA+AKA+EI+ S  D AFMLQQF+NP+NPK+H ETTGPEIW+ TDG+VDILV GVGTGGT+TG  +YL+ +KS +  VAVEP ES VLSG +PGPHKIQGIGAGFVP   D ++  E+ QVSS+++IDMAR LA +EGL+VGISSGAAV AAI+V SRPEN  K +VV++PSFGERYLS+ LFQ L D+A+KM
Sbjct:   40 IATDVTELIGKTPMVYLNKVATGTHAKIAAKLEIMEPCCSVKDRIGYSMISSAEKEGLITPGKTVLVEPTSGNTGIGLAFIAAARGYKLILTMPASMSLERRILLRAFGAELVLTDPAKGMKGAVAKAEEILASTPD-AFMLQQFQNPNNPKVHYETTGPEIWSATDGKVDILVSGVGTGGTITGTGRYLREKKSDVQLVAVEPAESPVLSGGKPGPHKIQGIGAGFVPAVLDTALISEVVQVSSDDAIDMARRLALEEGLMVGISSGAAVQAAIKVASRPENEGKLVVVVLPSFGERYLSSVLFQQLRDEASKM 353          
The following BLAST results are available for this feature:
BLAST of EWM27002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109172|gb|EWM27002.1|0.000e+0100.00cysteine synthase [Nannochloropsis gaditana][more]
gi|219114471|ref|XP_002176406.1|7.818e-15974.37predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397584861|gb|EJK53101.1|3.572e-15773.42hypothetical protein THAOC_27524 [Thalassiosira oc... [more]
gi|1210522896|dbj|GAX18366.1|5.729e-15775.00cysteine synthase A [Fistulifera solaris][more]
gi|1210512763|dbj|GAX28220.1|1.824e-15674.37cysteine synthase A [Fistulifera solaris][more]
gi|223996381|ref|XP_002287864.1|6.085e-15566.03predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|676391893|ref|XP_009039224.1|1.682e-15369.35hypothetical protein AURANDRAFT_59252 [Aureococcus... [more]
gi|298714094|emb|CBJ33850.1|1.774e-15268.07Cysteine synthase [Ectocarpus siliculosus][more]
gi|1072233806|gb|OEU18536.1|1.055e-15171.52putative cysteine synthase (O-acetylserine sulfhyd... [more]
gi|159467511|ref|XP_001691935.1|6.290e-14769.52cysteine synthase [Chlamydomonas reinhardtii] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3678rna3678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications