EWM27000.1, cds3662 (CDS) Nannochloropsis gaditana

Overview
NameEWM27000.1
Unique Namecds3662
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:930939..931508 +
Alignment locationCM002461.1:931684..932463 +
Alignment locationCM002461.1:932620..932799 +
Alignment locationCM002461.1:932952..933404 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27000.1
Productatp-binding cassette sub-family b member mitochondrial
Orig transcript idgnl|cribi|Naga_100079g4.10189.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:930939..931508 +
CM002461.1supercontigCM002461.1:931684..932463 +
CM002461.1supercontigCM002461.1:932620..932799 +
CM002461.1supercontigCM002461.1:932952..933404 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR011527ABC1_TM_dom
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|585109170|gb|EWM27000.1| (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 1343.95 bits (3477), Expect = 0.000e+0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0
Query:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRGGNIVRDEMVRESELPHVNNWRG 660
            MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRGGNIVRDEMVRESELPHVNNWRG
Sbjct:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRGGNIVRDEMVRESELPHVNNWRG 660          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|585109169|gb|EWM26999.1| (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 919.072 bits (2374), Expect = 0.000e+0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM 450
            MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM
Sbjct:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM 450          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|929764779|ref|XP_014157370.1| (hypothetical protein SARC_04277 [Sphaeroforma arctica JP610] >gi|906954483|gb|KNC83468.1| hypothetical protein SARC_04277 [Sphaeroforma arctica JP610])

HSP 1 Score: 454.136 bits (1167), Expect = 3.753e-146
Identity = 242/571 (42.38%), Postives = 352/571 (61.65%), Query Frame = 0
Query:   76 TEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQL--LRECKASTVVLIGHSATALEGSTRLVTLNRGGNIVRD 644
            T  + V L E+  +L  E K  ++A+ G+G ++A  +  P   G++VD+L+     +T A          ++E  + M+G+   G  AT+   + L++VGQ+I  +LRK+L+G I+ QD AFFDVN+SGEL NRL  DVHE AEHLVEN+  F  +++ + ++ G ++YISP L+  +  VVP I  GA  + K +K+LS   L++LA STQ AAE+   IR V     +  E   YG++ID S   A+RLA  +G+++   F + N  LL V+ LG   V+   L+VG L ++CLYA  LS ++ + T+  +G++RAQG+A RL+ LLE +P +  G     AE   G I F  V FAYPT P + ++E  +L +   E + +TG SGCGKSS+  LL  +Y P +G + +DG D+  LD AWLR  +  + QEP++FSGT+R NI   KP A+  E+VEAA L+NAH FI+ LP+ YDT +GER   LSGGQ+QR+AIARA+L KP  LV+DE T+ALD M++G VL  L  L   K  T +++ H    L    R+V ++ GG + RD
Sbjct:  239 TRGKQVKLTEVLSILKSEYKLMSLAMVGLGASTAATIAFPDALGTIVDVLAEPTTVDTYAR---------IKEITLNMVGIITVGAGATFLHATLLEMVGQKIGASLRKKLYGGIMAQDAAFFDVNRSGELVNRLGIDVHETAEHLVENVGSFTESAMKSASAVGAMVYISPLLTFYSAGVVPMIIGGALFFGKYIKRLSRKHLDALATSTQMAAERFGAIRTVVLCDQQQVEAREYGKVIDMSYLYAERLAYYQGLFLGCSFFIGNGVLLTVVGLGGNMVINNTLSVGQLTAFCLYAGMLSGSVSEVTESASGILRAQGSASRLFQLLEAKPKLGYGT-KKLAEGYNGNIRFNGVGFAYPTAPDAQIIEKLDLSVTAGEMVALTGRSGCGKSSVIALLQGLYEPNRGSITIDGVDLRDLDVAWLRSQMGYVQQEPVVFSGTIRSNIVYTKPDATQEEVVEAAKLSNAHEFITHLPKGYDTHVGERGASLSGGQRQRIAIARALLTKPRFLVLDESTSALDEMSEGVVLNSLKSLNRSKKITTLVVAHHLNTLAVCDRVVVMDTGGVVTRD 799          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|224011459|ref|XP_002295504.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209583535|gb|ACI64221.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 415.616 bits (1067), Expect = 4.737e-134
Identity = 226/567 (39.86%), Postives = 336/567 (59.26%), Query Frame = 0
Query:   89 LLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGA------------IIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQL--LRECKA---STVVLIGHSATALEGSTRLVTLNRG 638
            +LL E K+  +AL  + +++A  +  P   G ++D+LS  +       H     L  +   A+ M+     G   T+  ++  D +GQRI  +LRK+LF  I+ QD  FFD N++GELANRLSTDVHEVAEHLV+NI+ FL   V +  +   ++ +SP L++    VVP + + A  +   +K+ S   L+ LA ST  A E+ AGI  V  F  + +E +RY ++I  +   A+R+AV +G ++   + V N ALLGVL++G G VL+G +T G LA +C+YA  L++ + + ++ V G ++AQG+  RL+ALL+   + ++G             I+PP       I F DV F+YP+ P   +L   +  ++  E + +TG SGCGKSS+  LL R+Y P  G + LDG DV  L+  WLR  +  + QEP+LF  +VRENI+ GKP A+H EIVEA   ANAH FI  LP  YDT +GER   +SGG+KQRL+IARA+L KP +L +DE ++ALD+  + + LRQL  L E K    S V+ + H  + L+   R++ L+ G
Sbjct:    5 ILLPETKSLLIALGALTISTAATMQFPNAIGQMIDILSG-IPAMPQIQHEQQ--LEQMNRIALQMISFFTIGAVGTFIHSALFDSIGQRIGASLRKQLFTTIIHQDQTFFDQNRAGELANRLSTDVHEVAEHLVQNIAVFLSNVVRSLTAILSMIALSPVLTMYLSPVVPLLGVCAMGFGGAIKRFSKQHLDVLAHSTHVATERFAGIATVMSFGQKGKEVDRYSEVIQAAYEYARRVAVFQGAFLGTSYMVGNAALLGVLWIGGGYVLDGEMTAGQLAGFCMYAGHLADGVFEISESVGGFLKAQGSGARLFALLDKDSITEKGTNATPFGNGESSLILPP--NYNPTIRFEDVQFSYPSHPNVDILHRISFSVRQYEMIALTGSSGCGKSSVVSLLLRLYDPTHGSITLDGVDVRRLNVDWLRSQIGTVRQEPILFHASVRENISYGKPDATHEEIVEACVAANAHNFILELPNGYDTIVGERGASVSGGEKQRLSIARALLTKPRILALDEASSALDATAEQDFLRQLRHLLESKDNNLSLVLFVTHKKSVLQACDRVLVLSDG 566          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|545703048|ref|XP_005703851.1| (ABC transporter, subfamily B, ATP-binding & transmembrane domain [Galdieria sulphuraria] >gi|452820287|gb|EME27331.1| ABC transporter, subfamily B, ATP-binding & transmembrane domain [Galdieria sulphuraria])

HSP 1 Score: 383.259 bits (983), Expect = 4.422e-121
Identity = 221/589 (37.52%), Postives = 344/589 (58.40%), Query Frame = 0
Query:   67 VTRLDVGKPT-EQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRG-------------AIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGK-PSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLR--QLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            V+  +  KPT ++  VS +++  L   E    ++AL    V+    +  P   G +VD++   +  + D L    + L+GL           + G  A     + +  +G+RI+ +LRK++F +++ Q+LAFFD  +SGEL NRLS D   V++ L EN+++ + +SV  T   G L+Y+SP+L+V  LS +P + +    Y   V+ LS  L ++LA +TQ A+E+++ IR VR FA E  E  RY Q I+++  LAK++A++EG Y+   F +   +LL VL+ G  +VL+G LTVG LAS+ +YA ++   +    +G   + RAQGA  R++A+L+ +P    G             +  P  E  R  + F  V F YP+RP   V +G +  ++P E L ITG SGCGKS++  LL+R+Y P QG + L+GYD+ SLD +WLRR +  + Q+ +LF G++ ENIA G     S  EIV AAT+A A  FI +LP  Y+TQ+GER L LSGGQ+QR+A+ARA++ KP +L++DE T+ALD  ++  +     LLR  +    ++I H  + L  S  ++ LN+G
Sbjct:   10 VSGTNSAKPTAKEEFVSWRKLFSLAKPESNLLSLALLAQMVSVGTTMIFPMAVGKIVDIIQ--LPNSVDQLKWMASALAGLF----------VVGAVAVTVRVALMTTIGERIARDLRKQVFQSLMKQELAFFDGRQSGELVNRLSNDTSVVSKTLTENLARGIRSSVTTTGGIGFLIYLSPTLTVAALSFIPFLTIVGGIYGSYVRSLSRKLQDALASATQVASERISAIRTVRLFAGESIEVGRYTQRIEDAFQLAKKVAIAEGFYMGGGFFMGQASLLAVLWFGGHQVLQGALTVGQLASFAMYAVNVGFGVSSLANGYGQLTRAQGAGARIFAILDRKPCPLTGIEGLELGSSYSVSSHTPTLENDRPSLIFDQVHFYYPSRPQHSVFKGLSFQVEPGELLAITGISGCGKSTILSLLSRLYIPQQGHIYLNGYDINSLDISWLRRQIGAVPQDVVLFDGSIVENIAYGAGEEVSMDEIVRAATIAGADYFIRQLPYGYETQVGERGLSLSGGQRQRIALARAIVRKPKILILDEATSALDVESEASISEAVDLLRRKENMCTIVIAHRLSTLRDSNHVIVLNKG 586          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|1022777636|gb|KZS21162.1| (ABC transporter [Daphnia magna])

HSP 1 Score: 380.178 bits (975), Expect = 1.298e-119
Identity = 211/560 (37.68%), Postives = 331/560 (59.11%), Query Frame = 0
Query:   83 LKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ-RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGK---PSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            L+ +  L   EK   T  +  + V+SA  + IP+  G V+D++    G N +++  N      L   ++ ++G+ + G A  +  T  + + GQRI+  LR+ ++  I+ Q++AFFD NK+GEL NRLS D   V++ +  NIS  + +S +  A   M+ Y+SP L+++ LS+VP +A  A  Y + V+K+S ++ ++LA++TQ A E++A +R VR F  E RE  RY + I+  L L  + A ++G++ A      N  ++ VL+ G   V E  LT G L+++ LYA  ++ ++   +   + +++  GA+ RL+ L++ RP +   G  + PA    G I FRD++FAYPTR  +P+    NL +       I G SG GKS+LA LL R Y P+ GQVL+DGY V  LDP WLR  +  ++QEP LFS ++RENI  G     S S  +I++AA  ANA  FI + PQ  DT +GER ++LSGGQ+QR+AIARA++  P +L++DE T+ALDS ++  V   L R  K  TV+ I H  + +  ++++  L RG
Sbjct:   79 LRRLVGLAKSEKYRLTGGIGLLFVSSAITMAIPFALGKVIDII---YGANQESMVEN------LTNVSLILVGIFIFGAACNFGRTYLMGVSGQRITQALRRNVYAAIIKQEVAFFDKNKTGELINRLSADTSLVSQCVTSNISDGIRSSALVVAGVSMMFYMSPQLALVGLSIVPPVAGMAILYGRFVRKISKNVQDALAQATQVAEERIANVRTVRAFGQENREFARYDERIEHVLELGYKEAKAKGIFFALTGLSGNAIIISVLYYGGLMVTESSLTAGQLSAFLLYAAYVTISLSGLSSCYSEMMKGLGASTRLWQLIDKRPDIPISGGSVIPAGQFEGSIRFRDLSFAYPTRSDAPIFNNLNLDVPAGSVTAIVGSSGSGKSTLAALLLRFYDPISGQVLVDGYPVTDLDPQWLRANIGTVSQEPSLFSCSIRENILYGANTPDSISEEQIIQAAKEANAWSFIQQCPQGLDTIVGERGVLLSGGQRQRIAIARAIVKNPRILLLDEATSALDSESESLVQEALERVMKDRTVLTIAHRLSTIRKASQIAVLERG 629          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|929754292|ref|XP_014152128.1| (hypothetical protein SARC_09338 [Sphaeroforma arctica JP610] >gi|906946643|gb|KNC78226.1| hypothetical protein SARC_09338 [Sphaeroforma arctica JP610])

HSP 1 Score: 381.333 bits (978), Expect = 1.610e-119
Identity = 222/566 (39.22%), Postives = 323/566 (57.07%), Query Frame = 0
Query:   81 VSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ--------RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            VS++ +  LL  E     VA+  + V+S   L  P   G VVD +SAT   N D     TA     Q+  +AMLGV   G+ A     SQL+IV ++++  LRK +F  ++ Q L FF+ N++G L NRLSTD   VA  L +N+++ + A      S G LL ISP L+ +TL V+P   + A  Y +  KKL+  LL   AK  Q + E++ GIR V  F AE  E ERY + +D S GLAK +  +EG ++A  FAV+   LLGVL+ G   +++  L+VG L S+C+Y   L  ++   +  ++  ++AQGAA R++++++T  L +         GAI+P        IE ++V FAYPTRP   VL+  +L L+    L I G SG GKS+L LLL + Y   +G V + GY+ + L   +LR  +  +TQ PLLFSGTV+ENI  G P A+  +I EAA  ANAH FI +LP  YDTQ GER   LSGGQ QR+ IARA++    + ++DE T+ALD+ ++  V+  L +  K  T ++  H    L+ +  +  ++ G
Sbjct:  116 VSMRTLFELLRPETNRMAVAMGAVLVSSLASLAFPSAVGQVVDSVSAT---NPDGPSFETA-----QQIILAMLGVVGVGSTAVAVRVSQLNIVSEQVARTLRKNVFECMVYQKLRFFEENETGRLVNRLSTDTSMVASTLTDNVARCIKAGTAVFTSTGFLLSISPQLTGVTLLVLPVFGVAAYTYGEYRKKLAQILLTRYAKENQVSMERLQGIRTVHSFTAEPAEVERYKRAVDRSFGLAKTVGYAEGAFLAGGFAVAQCTLLGVLYYGGSLMVQDALSVGQLTSFCMYTGYLFVSVGQVSVAMSEFLKAQGAARRVFSVIDTSNLNRHIYPMKDPEGAIMPDMTNFSPDIELKNVNFAYPTRPDIQVLKNVSLSLQAGHTLAICGGSGSGKSTLGLLLGQYYDVDEGSVTIGGYEASKLPLGFLRTNIAEVTQMPLLFSGTVKENIKYGNPDATDEQIYEAAKTANAHGFIQKLPNGYDTQCGERGKALSGGQMQRVCIARAVIKDSPIYIMDEATSALDAESEQLVVEALQKVMKGRTAIVFTHHLNVLKAADMVAVMDSG 673          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|321454536|gb|EFX65703.1| (ABC transporter [Daphnia pulex])

HSP 1 Score: 370.933 bits (951), Expect = 5.219e-116
Identity = 210/590 (35.59%), Postives = 337/590 (57.12%), Query Frame = 0
Query:   58 WRQFRVTPAVTRLDVGKPTEQRPVSLK--EMGHLLLQEKKTFTVALAGIG---VASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ-RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENI---ALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            WR F  T A+ R    K  E+    LK  E+  L+   K      L GIG   V+SA  + IP+  G V+D++SA    N +++  N      L   ++ ++G+ + G A  +  T  + + G+RI+  +R+ ++  I+ QD+ FFD N++GEL NRLSTD   V++ +  N++  + +S +  ++  M+ Y SP ++++ LS+VP +A     Y + VKK++  + ++LA++TQ   E+++ IR VR F  E RE ERY + ID  L L  + A + G + A      N  ++  L+ G   V +  LTVG L+++ LYA  +  +M   +   + +++  GA+ R++ L++TRP +   G  + PA    G I FRD++FAYPTR   P+    NL +       I G SG GKS++A LL R Y P  GQVL+D + +  LDP WLR  +  ++QEP LFS ++RENI   A+   S S  ++++AA  ANA  FI + PQ  DT +GER ++LSGGQ+QR+AIARA++  P +L++DE T+ALD+ ++  +   L R  K  TV+ I H  + +  ++++  L  G
Sbjct:   49 WRFFSSTSALLRNSGLKTAEKVKPKLKSEEVRRLIGLAKPEKYRLLGGIGLLFVSSAITMVIPFAIGKVIDIISA----NQESMVEN------LTNVSLILVGIFIFGAACNFGRTYLMSVAGERITQTMRRNVYAAIVKQDVKFFDKNQTGELVNRLSTDTTLVSKCVTANLADGIRSSALVVSAISMMFYTSPQIALVGLSIVPPVAGLTIVYGRFVKKITKKVQDALAQATQVTEERISNIRTVRAFGQEKREFERYNEQIDHVLTLGYKEAKARGTFFALTGFAGNAIIISGLYYGGLMVADSSLTVGQLSAFLLYAAYVGISMGGLSSSYSEMMKGLGASTRIWQLIDTRPDIPISGGPVIPAGQFEGSIRFRDLSFAYPTRSDVPIFNNLNLSIPAGSVTAIVGSSGSGKSTIAALLLRFYDPTSGQVLVDNHSIKDLDPQWLRANIGTVSQEPSLFSCSIRENILYGAIDPNSVSEEQVIQAAKEANAWSFIQKCPQGLDTVVGERGVLLSGGQRQRIAIARAIVKNPRILLLDEATSALDAESESLIQEALERVTKGRTVLTIAHRLSTIRKASQIAVLEHG 628          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|557015863|ref|XP_006008385.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial [Latimeria chalumnae])

HSP 1 Score: 372.474 bits (955), Expect = 9.314e-116
Identity = 206/570 (36.14%), Postives = 325/570 (57.02%), Query Frame = 0
Query:   73 GKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ-RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHA---EIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            GK T       + +  L   E+     A+  +G++S   +  PY  G V+D++           +  T + S L     A+ GV L G AA  A    + I GQR+  ++R+ LF ++L Q++ FFD  ++GEL NRLS+D   +   + ENIS  L A V A A  GM+ Y+SP L+   L +VP +A+ A  Y + +++L+    ++LA++TQ A E++  IR VR F  E+ E E+YG+ +D  L L K+ A++   +        N  +L VL+ G   +    +TVG L+S+ +YA  +  ++   +   + +++  GA GRL+ LL+ +P       I+   E  +G +EFRD+ FAYPTR  +PV +  NL +     + + GPSG GKS+L  LL R+Y P  G +++DGYD+  L+P WLR  +  ++QEP+LFS ++ ENIA G    S     EI +AA +ANA+ FIS  P  +DT +GE+ ++LSGGQKQR+AIARA+L  P +L++DE T+ALD+ N+  V   L R  +  TV++I H  + ++ +  +  L++G
Sbjct:  134 GKKTTVSAEDSRRLLALAYPERWRLAAAVGFLGISSVVTMSAPYFLGRVIDVVYN---------NPTTDITSSLTSLCTALTGVFLCGAAANAARVYLMQISGQRVVKHMRESLFASVLRQEVGFFDKTRTGELINRLSSDTVLLGRSVTENISDGLRAVVQAMAGVGMMFYVSPKLAAFVLGIVPPLAVLAVVYGRYLRRLTRVTQDTLAQATQLAEERIGSIRTVRAFGKEMFEVEKYGKKMDYVLQLGKKEAMARAGFFGITGLSGNLIVLSVLYKGGLLMGNAYMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGIGAGGRLWELLDRKPAFPLNEGIVLSRETFKGALEFRDLHFAYPTRTEAPVFQRLNLYIPAGSVMAVVGPSGSGKSTLVSLLLRLYDPTSGAIIIDGYDLRHLNPQWLRTNIGTVSQEPILFSCSIAENIAYGVKDPSQVTAEEIYKAAEIANANTFISNFPHGFDTVVGEKGILLSGGQKQRIAIARALLKDPRILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIQNANAVAVLDQG 694          
BLAST of EWM27000.1 vs. NCBI_GenBank
Match: gi|704295908|ref|XP_010161289.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial [Antrostomus carolinensis])

HSP 1 Score: 367.081 bits (941), Expect = 2.432e-115
Identity = 204/544 (37.50%), Postives = 319/544 (58.64%), Query Frame = 0
Query:  100 ALAGIGVASACQLCIPYIFGSVVDLLSATVGEN-TDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRP-LMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALG--KPSASHAE-IVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRG 638
            A+  + V+S   +  P+  G V+D++     E+ TD+L S  A+LSG          + L G AA       +   GQRI  +LR  +F +IL Q++AFFD  ++GEL NRLS+D   +   + EN+S  L A   A+   GM+ ++SPSL+   LSVVP +A+ A  Y + ++KL+    +SLA++TQ A E++  IR VR F  E+ E E+Y   +D  L LAK+ A++   +  A     N  +L VL+ G   +    +TVG L+S+ +YA  +  ++   +   + +++  GA GRL+ L+E +P L     I    +  RG +EF+DV FAYPTRP + + + F+L +     + + GPSG GKS++  LL R+Y P  G + +DG+D+  L+P WLR  +  ++QEP+LFS ++ ENIA G   PS   AE I + A +ANA  FI   P+++DT +GE+ ++LSGGQKQR+AIARA+L  P +L++DE T+ALD+ N+  V   L R  +  TV++I H  + ++ +  +  L +G
Sbjct:    9 AVGFLAVSSVITMSAPFFLGKVIDIIYTNPSEDFTDSLTSLCALLSG----------IFLCGAAANATRVYLMQTAGQRIVKHLRTTMFSSILKQEMAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLAAFVLSVVPPLAVLAVIYGRYLRKLTKMTQDSLAEATQLAEERIGNIRTVRAFGQEVAEMEKYTNKVDYVLQLAKKEALARAGFFGATGLSGNLIVLSVLYKGGLLMGSAYMTVGELSSFLMYAFWVGVSIGGLSSFYSELMKGLGAGGRLWELMERKPQLPFNEGITLGKDTFRGALEFKDVEFAYPTRPETSIFKDFSLSIPAGSVMALVGPSGTGKSTIVSLLLRLYDPTSGAITVDGFDIRQLNPLWLRTQIGTVSQEPILFSCSIAENIAYGAEDPSTVTAEQIQKVAEIANAASFIRDFPKEFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMEGRTVLIIAHRLSTIQNADFVAVLGQG 542          
The following BLAST results are available for this feature:
BLAST of EWM27000.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109170|gb|EWM27000.1|0.000e+0100.00atp-binding cassette sub-family b member mitochond... [more]
gi|585109169|gb|EWM26999.1|0.000e+0100.00atp-binding cassette sub-family b member mitochond... [more]
gi|929764779|ref|XP_014157370.1|3.753e-14642.38hypothetical protein SARC_04277 [Sphaeroforma arct... [more]
gi|224011459|ref|XP_002295504.1|4.737e-13439.86predicted protein, partial [Thalassiosira pseudona... [more]
gi|545703048|ref|XP_005703851.1|4.422e-12137.52ABC transporter, subfamily B, ATP-binding & transm... [more]
gi|1022777636|gb|KZS21162.1|1.298e-11937.68ABC transporter [Daphnia magna][more]
gi|929754292|ref|XP_014152128.1|1.610e-11939.22hypothetical protein SARC_09338 [Sphaeroforma arct... [more]
gi|321454536|gb|EFX65703.1|5.219e-11635.59ABC transporter [Daphnia pulex][more]
gi|557015863|ref|XP_006008385.1|9.314e-11636.14PREDICTED: ATP-binding cassette sub-family B membe... [more]
gi|704295908|ref|XP_010161289.1|2.432e-11537.50PREDICTED: ATP-binding cassette sub-family B membe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3671rna3671Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications