EWM27020.1, cds3649 (CDS) Nannochloropsis gaditana

Overview
NameEWM27020.1
Unique Namecds3649
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:904522..905260 -
Alignment locationCM002461.1:903467..904281 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27020.1
Productudp-n-acetylglucosamine pyrophosphorylase
Orig transcript idgnl|cribi|Naga_100309g5.7054.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:904522..905260 -
CM002461.1supercontigCM002461.1:903467..904281 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0070569uridylyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002618UDPGP_trans_fam
IPR029044Nucleotide-diphossugar_trans
Homology
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|585109192|gb|EWM27020.1| (udp-n-acetylglucosamine pyrophosphorylase [Nannochloropsis gaditana])

HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0
Query:    1 MPHDHDVDERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRFLDA 517
            MPHDHDVDERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRFLDA
Sbjct:    1 MPHDHDVDERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRFLDA 517          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|1129206977|gb|OLQ08990.1| (UDP-N-acetylhexosamine pyrophosphorylase [Symbiodinium microadriaticum])

HSP 1 Score: 436.417 bits (1121), Expect = 5.965e-146
Identity = 226/494 (45.75%), Postives = 308/494 (62.35%), Query Frame = 0
Query:   23 QDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAA--AGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRF 514
            Q  V  +VDAG+AT EE  +L  Q+E++DL  + +       E +A   A      D++  L+D  + D  S      W   GLDAIGRG+VAA VL+GGQGTRLGFDGPKG YDIGLPS K +FQL  E++LR+  +A E              G     +PF +MTSP+ H +T  FF+ENNYFG    +V+FF Q TMPC    GK++LES  ++A  PDGNGG+YP+L R+G L  +++ G+ + HVFSVDN L + ADP F+G+CLAR +DCGN  VWK + EEKVGV+ +K GRP+VVEYSE+D +     +       G+L +GAGNIC+HF ++DF+ +VV+P   A++H A K IP       +  P    +   G+KLEAF+FDV P S ++A+ E +R++ FAPVK+APG+ SD+P+ AR M+SA    W+ +AGGK+ G  +         E  E+SPL+SY GEGL ERV G    +P   
Sbjct:   21 QSQVFRFVDAGVATEEEAKALSAQLESIDLEYVAKSLKSAQAEAAALAEAVDLEPPDQFTCLADATAEDIAS------WRAQGLDAIGRGEVAACVLAGGQGTRLGFDGPKGCYDIGLPSKKPLFQLFVEKLLRLRTMAKE-------------AGGPNPRLPFLIMTSPMTHMQTVSFFEENNYFGTSKEEVWFFEQGTMPCLSPDGKIILESAGTVASNPDGNGGLYPALQRSGCLGRLQSLGVKSLHVFSVDNPLCRPADPCFVGYCLARSADCGNKCVWKASPEEKVGVVAKKGGRPSVVEYSELDDARKNQLDG-----TGRLAFGAGNICNHFFSIDFLANVVVPNMAAMFHLAHKKIPCAGEDGKTVKP----DSNNGLKLEAFVFDVFPMSSKMAILETKRQEEFAPVKNAPGTPSDSPDSARAMVSALCRSWIEQAGGKLEGSKD---------EVVEVSPLLSYAGEGLAERVSGQTFPVPCHL 477          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|299470636|emb|CBN78577.1| (udp-n-acetylglucosamine pyrophosphorylase [Ectocarpus siliculosus])

HSP 1 Score: 438.343 bits (1126), Expect = 8.071e-146
Identity = 237/493 (48.07%), Postives = 310/493 (62.88%), Query Frame = 0
Query:   23 QDHVLSYVDAGL--ATPEETASLLTQIEALDLPELNRIF---NGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEG-KDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLRE-----AGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVG 504
            QDHV  YVD+G   A  +E ++L+ Q+  +D   +N++            A  +      +  P+    SV +  P     W E GL A+  GKVA +VL GGQGTRLGFDGPKGMYDIGLPSGK++FQL AER+ RV ALAA     + +G  +          IP+Y+MTSPLN   T++FF  ++YFG+   DVFFF Q T+PC   +GK++LE+ + +A APDGNGGIYP+L R GALADMR+RG++  HVFS+DN L+++ADP FLG+C+ +K+DCGN  VWK    EKVGV+V++ G+P VVEYSEM+      RE      G  G  G+LV+GAGNIC+H+ +L F+E  VLP    +YH A K IPA   S  +T          G+KLE+FIFDV P S+ + L+E  RED FAPVK+APGS +D+P+ AREM+S +A RW   A     G    GG+ G      EISPLVSY GEGL  R G
Sbjct:   41 QDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNQLHLSTTAAAAAADADGSGGGAAQDMEPIESFGSVASAHPDEAARWFETGLGAVRDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGCSGNASDGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFAASDYFGVPKEDVFFFSQGTLPCMTREGKIILETGSRVAMAPDGNGGIYPALQRKGALADMRSRGVEHVHVFSIDNALVRIADPHFLGYCIEKKADCGNKSVWKSEPGEKVGVVVKRGGKPCVVEYSEMEKEACERREGSSNGTGGGGGGGRLVFGAGNICNHYFSLAFLEDTVLPGMADMYHVAHKKIPAADGSHGTTLKPAENN---GIKLESFIFDVFPLSKNMVLFEAAREDEFAPVKNAPGSSTDSPDTAREMISRQARRWAAAAAAAAGGGATSGGDEGL----CEISPLVSYGGEGLEGRAG 526          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|1072230897|gb|OEU15630.1| (putative UDP-N-acetylglucosamine diphosphorylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 429.869 bits (1104), Expect = 1.823e-143
Identity = 222/491 (45.21%), Postives = 307/491 (62.53%), Query Frame = 0
Query:   21 ACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALP 511
            A Q+HV+ ++DA     +E    L Q++++ + EL+ +         +++A    + +  P S      T +          G++AI RG+VAALVL+GGQGTRLGF GPKGMYDIGLPSG+++FQLLAER+ R+  +A+             +  +     PFY+MTSP+NHE+T +FFKEN+YFGL   +V FF+Q  +PC   +GK+++E+ + +A APDGNGGIYPSL  +G   DM  RGI   HVFS+DN L K+ADP F+G+C+ + SDCGN VVWK    EKVGV+  K+G   VVEYSE+ T      +A +   +G+L++GAGNIC+HF TLDF+   V+P  G +YH ARK IP    +  ST      E   G+KLE+FIFD+ P SER+A+ +  RE  FAPVK+APGS SD+P+ AR+ +S +A +WV  AGG + G  +            EISPL SY GEGL E+V G ++  P
Sbjct:   14 AGQEHVVRHLDALSTDAKEI--FLKQLDSIKVEELSSLL-------ESALADQKEDGKVTPFSKSVGRLTDNKNESTLAYRKGIEAISRGEVAALVLAGGQGTRLGFAGPKGMYDIGLPSGRTLFQLLAERLKRLQQVASNSI---------DDSATPACSCPFYIMTSPINHEQTVNFFKENDYFGLSENNVKFFQQGMLPCMTNEGKMIMETNSEIAMAPDGNGGIYPSLQNSGMFDDMSNRGIKYLHVFSIDNALTKIADPAFIGYCIMKDSDCGNKVVWKNGPHEKVGVIAEKDGMSCVVEYSEITTD-----DAERTDLDGRLLFGAGNICNHFYTLDFLRDKVMPSLGNLYHIARKKIPYYDEATQSTIK---PETNNGIKLESFIFDIFPLSERMAVLDTIREQEFAPVKNAPGSPSDSPDTARQYISKQAQKWVIEAGGNLTGDLDS---------ICEISPLTSYGGEGLEEKVKGKDIHCP 469          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|1210512320|dbj|GAX28589.1| (UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [Fistulifera solaris])

HSP 1 Score: 421.779 bits (1083), Expect = 2.870e-140
Identity = 225/507 (44.38%), Postives = 306/507 (60.36%), Query Frame = 0
Query:    8 DERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRF 514
            DE+  R R A   A Q HV  Y D+     +E   LL+Q++ + +  L+ +      + SA  + A       P+       TT   L+ +  ++G++AI +G+VAALVL+GGQGTRLG+DGPKGMYDIGLPS KS+FQL+AERI R+  LA                G     +PFY+MTSPLNH +T+ F++ +NYFGL   +V FF Q  +PC    GK+++E+   +A APDGNGGIYPS+  +GALADM  RG+   HVFS+DN LIK ADP F+G+C+ + SDCGN V WK  A E VGV+  ++G+P +VEYSE+   M     A    E+G+LVYGAGNIC+HF T+ F++  ++P  G +YH ARK I         T   +      G+KLE FIFDV PFSE +A+ +V R   FAPVK+ PGS +D+P+ ARE++SA +  +V  AGGK+ G   G           E+SPL SY GEG+ E V G ++  P   
Sbjct:    3 DEQQIRDRYA--SAGQSHVFDYYDS--LNVDEKEKLLSQLDEIQVERLDSLLKSALEQESAGTSDADIKPFGGPVGR-----TTDEKLVADCSKVGMEAIAKGQVAALVLAGGQGTRLGYDGPKGMYDIGLPSKKSLFQLMAERIKRLETLA----------------GDNNVIVPFYIMTSPLNHAETEKFWESHNYFGLGKENVSFFSQGMLPCMKDDGKIIMETAGEVAMAPDGNGGIYPSMVSSGALADMEKRGVKYLHVFSIDNALIKPADPVFMGYCINQGSDCGNKVCWKVDAAESVGVVATRSGKPCIVEYSEISKEM-----AESVDEDGRLVYGAGNICNHFYTIAFIKDKIIPNLGNLYHIARKKIKYYDGEKKETITPSAN---TGLKLETFIFDVFPFSENMAVLDVDRSMEFAPVKNKPGSPADSPDTARELISAMSKTFVTAAGGKLTGDESG---------ICEVSPLTSYSGEGMEEIVQGRKIICPFSL 467          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|1210521162|dbj|GAX19910.1| (UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [Fistulifera solaris])

HSP 1 Score: 418.698 bits (1075), Expect = 4.674e-139
Identity = 221/508 (43.50%), Postives = 308/508 (60.63%), Query Frame = 0
Query:    7 VDERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPIRF 514
            V+E   R R A   A Q HV  + D+     +E   LL+Q++ + +  L+ +      + SA+ + A       P+       TT   L+ +  ++G++AI +G VAALVL+GGQGTRLG+DGPKGMYDIGLPS KS+FQL+AERI R+  LA +  +                 +PFY+MTSPLNH +T+ F++ +NYF L   +V FF Q  +PC    G +++E+   +A APDGNGGIYPS+  +GALADM  RG+   HVFS+DN LIK ADP F+G+C+ + SDCGN V WK  A E VGV+  ++G+P +VEYSE+   M     A    ++G+LVYGAGNIC+HF T++F++  ++P  G +YH ARK I         T   T     +G+KLE FIFDV PFSE++A+ +V R   FAPVK+ PGS +D+P+ ARE++SA +  +V  AGGK+ G   G           E+SPL SY GEG+ E V G ++  P   
Sbjct:    2 VEEEQVRARYA--SAGQSHVFDFYDS--LNVDEKEKLLSQLDEIQVERLDSLLKSAFEQESAASSDADIKPFGGPVGR-----TTDEKLVADCSKIGMEAIAKGHVAALVLAGGQGTRLGYDGPKGMYDIGLPSKKSLFQLMAERIKRLETLAGDNVI-----------------VPFYIMTSPLNHAETEKFWESHNYFDLGKENVSFFSQGMLPCMKDDGMIIMETAGEVAMAPDGNGGIYPSMVSSGALADMEKRGVKYLHVFSIDNALIKPADPVFMGYCINQGSDCGNKVCWKVDAAESVGVVATRSGKPCIVEYSEISKEM-----AESVDDDGRLVYGAGNICNHFYTIEFIKDKIIPNLGNLYHIARKKIKYYDGEKKETITPTAN---SGLKLETFIFDVFPFSEKMAVLDVDRSMEFAPVKNKPGSPTDSPDTARELISAMSKTFVTAAGGKLTGDESG---------ICEVSPLTSYSGEGMEEIVQGRKIICPFSL 466          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|1214699312|gb|OWZ12137.1| (hypothetical protein PHMEG_00014749, partial [Phytophthora megakarya])

HSP 1 Score: 412.535 bits (1059), Expect = 7.402e-137
Identity = 222/470 (47.23%), Postives = 289/470 (61.49%), Query Frame = 0
Query:   46 QIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEG----GGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALP 511
            Q+EALDL  L  IF       +++ A AA      PL     ++  S    + W   GL+AI + +V ALVLSGGQGTRLGF GPKGMY+IGLPS KS+FQL AER+L +  LAA +F         P        IPFYVMTS +NHE T DFFKE+ YFGL  + +FFF Q T+PCF  +GKL+LE+   LA A DGNGG+Y ++  +GALA+++A G+   HVFSVDN L K ADPTF+G+C+ +++DCGN VVWK   +EKVGV+ ++NG   VVEYSE+D + +   +       GKL +GA NIC+HF T+DF+ +VVLP     YH A K IP    + A+  P + +    G+KLEAFIFDV P S R+A+  V RE  FAPVK+APG+  D+P+ AR M+  EA  W+  A   +    +       E        EISPLVSY GE L  RV  +  +LP
Sbjct:    1 QLEALDLELLKNIFQ------ASTQAEAAETATIEPLESYDLLEQCSAEDKQRWVHYGLEAISQKQVCALVLSGGQGTRLGFAGPKGMYNIGLPSEKSLFQLFAERLLALEMLAAHKF---------PMRSREEIQIPFYVMTSKMNHETTVDFFKEHEYFGLKESQMFFFSQGTLPCFTTEGKLILENSHKLATASDGNGGLYKAMETSGALANLKAHGVKYLHVFSVDNALCKAADPTFIGYCIDKQADCGNKVVWKAHPDEKVGVVAKRNGAYCVVEYSELDLAASEQVDPST----GKLSFGAANICNHFYTIDFLVNVVLPNSSLEYHVAHKKIPMANDTGATFTPTSNS----GIKLEAFIFDVFPLSSRMAVLSVPRETEFAPVKNAPGNPIDSPDSARRMIHEEAKTWLLAAASSISNSAQDIDMFVQEKLDKALRIEISPLVSYNGERLEARVKSLMESLP 447          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|219121821|ref|XP_002181257.1| (udp-n-acetylglucosamine pyrophosphorylase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407243|gb|EEC47180.1| udp-n-acetylglucosamine pyrophosphorylase, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 410.223 bits (1053), Expect = 1.148e-135
Identity = 222/509 (43.61%), Postives = 304/509 (59.72%), Query Frame = 0
Query:    6 DVDERIARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDE--YAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGLGERVGGMEVALPI 512
            D D+  + +R     A Q+HV  +      +P E  S L Q+  + +  +      + ++ + S+      DE   AP        +T   L+R+    G++AI + +VA LVL+GGQGTRLGFDGPKGMY IGLPS +++F ++A RI +++ALA E  +                 +PFYVMTSPLNH+ T  +F    YFGL  +DVFFF+Q T+PC    GK++LE    +A APDGNGGIYP+L R+GAL DM  RG+   HVFS+DN LIK ADP FLG+C+ + +DCGN VVWK  A EKVGV+  + G+P +VEYSE+ T M     A    ++G+L++GAGNIC+HF TLDF+   +LP  G +YH A K IP    +  ST  V  TE   G+KLE FIFDV P S  +A++E+ R + F+PVK+  GS +D+P+ AR M S +A +W+  AGG ++G+               ISPL SY GEGL E   G +VA P 
Sbjct:   10 DADDE-SEIRSRYVQAGQEHVFQHY--AQLSPTERTSFLHQLRDIQVENV-----AILLKSAESIDQGEPTDETAIAPFPTNIVGRSTDETLVRDSYTTGMEAIRKNQVATLVLAGGQGTRLGFDGPKGMYSIGLPSERTLFAMMALRIRKLAALAGEENVA----------------LPFYVMTSPLNHDATVAYFHSKEYFGLPESDVFFFQQGTLPCLTKDGKIILERAGKVAVAPDGNGGIYPALQRSGALQDMMTRGVRYLHVFSIDNALIKPADPVFLGYCIGQGADCGNKVVWKSHAHEKVGVVASRGGKPCIVEYSEITTEM-----AESTDDDGRLLFGAGNICNHFYTLDFLREKILPNMGNMYHIAHKKIPFYDAATQST--VAPTEN-NGIKLETFIFDVFPLSVNMAVFEIERSEEFSPVKNKAGSEADSPDTARAMASDQAKKWIKNAGGNLIGK---------------ISPLTSYGGEGL-EHYEGQDVACPF 470          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|675196577|ref|XP_008907173.1| (hypothetical protein PPTG_13325 [Phytophthora parasitica INRA-310] >gi|568092611|gb|ETN07416.1| hypothetical protein PPTG_13325 [Phytophthora parasitica INRA-310] >gi|570981531|gb|ETP41924.1| hypothetical protein F442_11088 [Phytophthora parasitica P10297])

HSP 1 Score: 402.519 bits (1033), Expect = 1.970e-132
Identity = 221/504 (43.85%), Postives = 301/504 (59.72%), Query Frame = 0
Query:   12 ARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSD--LASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGL-GERVGGMEVALPI 512
            A +R +  +A Q HV  +VDAG  T ++ + L   +E+L   E ++I N       A   A+A  DE  PL +  +  +  T+P L ++W ++GL+A+ +G   AL+LSGGQGTRLGF GPKGMYDIGLPSGKS+F++ A R+L+V  LA  RF  S   K           IP  +MTS +NH+ T  FF++N YFGL    + FFRQ T+PCF   GK +LE+ + LA+A DGNGGIYP+L R+G L  + AR +   HVFSVDNVL KVADP F+G+C+ + +DC N VVWK   +E VGV+ ++NG   VVEYSE+D + +   +       GKL +GA NIC+HF  LDF++     +  A+YH A+K IP +     +T   T      G+KLE FIFDV P S+ + +  V RED FAPVK+APGS SD+P+ AR+++S +  RW+  AG                    EI P +SY GEGL G       + LPI
Sbjct:   15 ASLRKSYENAGQGHVFRFVDAGKVTAQDASVL---VESLQQYEPHQIANLFDRSTKADSVASAAADEVTPLEEGVVHQLTETAPELKKKWLDLGLEAVSKGMTGALILSGGQGTRLGFAGPKGMYDIGLPSGKSLFEIFALRVLKVQELAQTRFNLSESPK-----------IPLLIMTSEMNHDTTVSFFRDNKYFGLSQDQLHFFRQGTLPCFTDDGKFILETASQLAKASDGNGGIYPALKRSGMLDLLTARNVQYLHVFSVDNVLCKVADPVFIGYCIDQDADCANKVVWKTRPDESVGVVAKRNGAYCVVEYSELDRAASEQVDP----HTGKLSFGAANICNHFFRLDFLQRCC-NQNDAIYHVAKKKIPYVNDEGTATITPTSN---TGIKLETFIFDVFPLSKSMKVLGVAREDEFAPVKNAPGSASDSPDSARQLISEQCKRWLVDAGATFADSSSDA--------VCEILPTLSYNGEGLEGVARAKSPIQLPI 488          
BLAST of EWM27020.1 vs. NCBI_GenBank
Match: gi|970636001|gb|KUF80749.1| (UDP-N-acetylglucosamine diphosphorylase 2 [Phytophthora nicotianae] >gi|970636566|gb|KUF81055.1| UDP-N-acetylglucosamine diphosphorylase 2 [Phytophthora nicotianae] >gi|970647623|gb|KUF87398.1| Formin-y 2 domain-containing protein [Phytophthora nicotianae])

HSP 1 Score: 402.519 bits (1033), Expect = 1.974e-132
Identity = 221/504 (43.85%), Postives = 301/504 (59.72%), Query Frame = 0
Query:   12 ARVRLALRDACQDHVLSYVDAGLATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGNDEYAPLSD--LASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQSTMPCFDLKGKLLLESPTSLAQAPDGNGGIYPSLARTGALADMRARGIDAFHVFSVDNVLIKVADPTFLGFCLARKSDCGNMVVWKKAAEEKVGVMVRKNGRPAVVEYSEMDTSMTTLREAGKAGEEGKLVYGAGNICSHFLTLDFVEHVVLPRFGAVYHAARKMIPALPTSFASTFPVTVTEKVAGVKLEAFIFDVLPFSERVALWEVRREDAFAPVKDAPGSGSDTPERAREMLSAEAVRWVGRAGGKVVGQGEGGGEGGRGGEGSEISPLVSYRGEGL-GERVGGMEVALPI 512
            A +R +  +A Q HV  +VDAG  T ++ + L   +E+L   E ++I N       A   A+A  DE  PL +  +  +  T+P L ++W ++GL+A+ +G   AL+LSGGQGTRLGF GPKGMYDIGLPSGKS+F++ A R+L+V  LA  RF  S   K           IP  +MTS +NH+ T  FF++N YFGL    + FFRQ T+PCF   GK +LE+ + LA+A DGNGGIYP+L R+G L  + AR +   HVFSVDNVL KVADP F+G+C+ + +DC N VVWK   +E VGV+ ++NG   VVEYSE+D + +   +       GKL +GA NIC+HF  LDF++     +  A+YH A+K IP +     +T   T      G+KLE FIFDV P S+ + +  V RED FAPVK+APGS SD+P+ AR+++S +  RW+  AG                    EI P +SY GEGL G       + LPI
Sbjct:    9 ASLRKSYENAGQGHVFRFVDAGKVTAQDASVL---VESLQQYEPHQIANLFDRSTKADSVASAAADEVTPLEEGVVHQLTETAPELKKKWLDLGLEAVSKGMTGALILSGGQGTRLGFAGPKGMYDIGLPSGKSLFEIFALRVLKVQELAQTRFNLSESPK-----------IPLLIMTSEMNHDTTVSFFRDNKYFGLSQDQLHFFRQGTLPCFTNDGKFILETASQLAKASDGNGGIYPALKRSGMLDLLTARNVQYLHVFSVDNVLCKVADPVFIGYCIDQDADCANKVVWKTRPDESVGVVAKRNGAYCVVEYSELDRAASEQVDP----HTGKLSFGAANICNHFFRLDFLQRCC-NQNDAIYHVAKKKIPYVNDEGTATITPTSN---TGIKLETFIFDVFPLSKSMKVLGVAREDEFAPVKNAPGSASDSPDSARQLISEQCKRWLVDAGATFADSSSDA--------VCEILPTLSYNGEGLEGVARAKSPIQLPI 482          
The following BLAST results are available for this feature:
BLAST of EWM27020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109192|gb|EWM27020.1|0.000e+0100.00udp-n-acetylglucosamine pyrophosphorylase [Nannoch... [more]
gi|1129206977|gb|OLQ08990.1|5.965e-14645.75UDP-N-acetylhexosamine pyrophosphorylase [Symbiodi... [more]
gi|299470636|emb|CBN78577.1|8.071e-14648.07udp-n-acetylglucosamine pyrophosphorylase [Ectocar... [more]
gi|1072230897|gb|OEU15630.1|1.823e-14345.21putative UDP-N-acetylglucosamine diphosphorylase [... [more]
gi|1210512320|dbj|GAX28589.1|2.870e-14044.38UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine ... [more]
gi|1210521162|dbj|GAX19910.1|4.674e-13943.50UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine ... [more]
gi|1214699312|gb|OWZ12137.1|7.402e-13747.23hypothetical protein PHMEG_00014749, partial [Phyt... [more]
gi|219121821|ref|XP_002181257.1|1.148e-13543.61udp-n-acetylglucosamine pyrophosphorylase [Phaeoda... [more]
gi|675196577|ref|XP_008907173.1|1.970e-13243.85hypothetical protein PPTG_13325 [Phytophthora para... [more]
gi|970636001|gb|KUF80749.1|1.974e-13243.85UDP-N-acetylglucosamine diphosphorylase 2 [Phytoph... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3658rna3658Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications