EWM27057.1, cds3639 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|585109231|gb|EWM27057.1| (hypothetical protein Naga_100056g7 [Nannochloropsis gaditana]) HSP 1 Score: 748.814 bits (1932), Expect = 0.000e+0 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0 Query: 1 MQSRGRVRVLLLVMLFTMPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGKGSEN 366 MQSRGRVRVLLLVMLFTMPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGKGSEN Sbjct: 1 MQSRGRVRVLLLVMLFTMPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGKGSEN 366
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|553184423|ref|XP_005854086.1| (uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526] >gi|422294972|gb|EKU22271.1| uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 Query: 18 MPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQ 335 MPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQ Sbjct: 1 MPDAISAYVFNRLQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQ 318
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|551652528|ref|XP_005829043.1| (hypothetical protein GUITHDRAFT_164226 [Guillardia theta CCMP2712] >gi|428173159|gb|EKX42063.1| hypothetical protein GUITHDRAFT_164226 [Guillardia theta CCMP2712]) HSP 1 Score: 142.51 bits (358), Expect = 1.286e-35 Identity = 91/283 (32.16%), Postives = 145/283 (51.24%), Query Frame = 0 Query: 82 SAAQARIKGAAEIDAEAYFQDLLKGNPLTGGI--EQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIF-EGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVL-VTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISL 360 +A ++ GAAE+D Y TG E + +EI PAR +D+E A L ++ E +G ++ ++ V + R+ V FQ+R F DL+++ D SY ++ A+++P+ R F RQ+ + +L ++ +G A+ Y++ ++G E+A G S +LA +K GFL+ V D+D W L VT+ +P TL N+Q GEG F PD + L YL CG+ + Y +D YRPNP DY P++VL QI++ Sbjct: 83 AATTTKVWGAAELDFWVYICSA------TGKFCPEMTKVEISPARKVDRELAEALHSIPRQVFVEMTGRKVQELDASVDSDRELVLSLFQKRVSFDPSDLTDQYSLDFDSYLVWKSLARILPSNEERRVFQRQVAKRMLEQLTRQGASAV-------FYNSVEEGPEKAFQGCSSLLALLKSTGFLEASNVEVGDFDVKYWKSDSPPTTLTVTIDKPVTLQANLQLGGEGTGFKPDVIENMLAVYLESCGML-VDWVSYFIDPTYRPNPDDYQPSQVLCQINV 351
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|1210526105|dbj|GAX15023.1| (hypothetical protein FisN_12Lh281 [Fistulifera solaris]) HSP 1 Score: 135.191 bits (339), Expect = 9.955e-33 Identity = 98/332 (29.52%), Postives = 157/332 (47.29%), Query Frame = 0 Query: 57 SSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEI-RPARVLDKEFATFLDK-------TTLKLLS---------ETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNA---------DDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGK 362 ++RR ++ G LAA P A A +GAAE+D E Y +D + GN G ++ S + I P R L F L+K T +L++ ET+ + E + R+ + F RAP+ + ++++ FD +Y+ ++ AA L+PN R FVR LG ++ + +R + K +++ L ++ + +L F K +R+ DD D +W G S++ L+++ E ATLG ++Q TGE F PD V T+ A ++ Y +D EYRPNPKDY P E L+Q +L K Sbjct: 49 TTRRQILLQPIVLGSLAA------PQNANA-ARGAAELDLEFYVRDFIGGNRPEGNVQASTLPILAPPRTLSPFFEKVLNKECSIDCLATQQLIAQIQRRDQKRETALLEKE-IHRQAHTIGEGARKSFYSRAPWESETMTDQYFFDLTAYSFWKTAAVLLPNFADRDMFVRNLGRSIYQSL-RDERLLQTKC-------REESLSSSIPCVVAVLDCFVSTNFCKAYRLGEKIDDEYLFLDDIDNQAWSNGVSVDCLLSIFESATLGSSLQITGEQSRFIPDLVGPTIAAVWDTQSTVQWES--YFVDPEYRPNPKDYFPNEQLFQYTLAK 362
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|1210517447|dbj|GAX23704.1| (hypothetical protein FisN_12Hh281 [Fistulifera solaris]) HSP 1 Score: 133.265 bits (334), Expect = 4.005e-32 Identity = 96/332 (28.92%), Postives = 160/332 (48.19%), Query Frame = 0 Query: 57 SSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIE-IRPARVLDKEFATFLDK-------TTLKLLS---------ETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNA---------DDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGK 362 ++RR ++ G L +T +A AR GAAE+D E Y +DL+ GN G ++ S + + P R L F L+K T +L++ ET+ + E ++R+V R+ F RAP+ + ++++ FD +Y+ ++ AA ++PN R FVR +G ++ + + + K + + L + + +L + F K +R+ DD D +W +G S++ L+++ E ATLG ++Q TGE F PD V T+ A + + Y +D EYRPNPKDY P E L+Q +L K Sbjct: 40 TTRRQILLQPIVLGSL-----ITPQNANAAR--GAAELDFEFYVRDLIGGNRPEGNVQASTLPTLAPPRTLSLFFEKILNKECSIECLATQQLIAQIQRREKKRETTFLEKE-IQRQVQTIREGARKSFFSRAPWESETMTDQYFFDLTAYSFWKTAAVMLPNFADRDMFVRNVGRSIYTSL-RDEGLLKTKC-------RDESLSSCIPCVVEVLDFFVSTNFCKAYRLGEKVDDEYLFLDDIDNQAWSKGVSVDCLLSIFESATLGSSLQITGEQSRFIPDLVGPTIAAVWD--PQSSVQWESYFVDPEYRPNPKDYFPNEQLFQYTLAK 353
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|219122732|ref|XP_002181694.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406970|gb|EEC46908.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.02 bits (310), Expect = 1.400e-28 Identity = 110/376 (29.26%), Postives = 168/376 (44.68%), Query Frame = 0 Query: 30 LQYHKLMMTSDDSLRSLSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTH--PSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKE-----------------FATFLDKTTLKLLSET--SGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNA----DDYDRASWD----------------EGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVL--YQISLGK 362 L Y +L++ S+ L+ + N S R+ V + A GK L + PS AQA +GAAE+D E Y + + GN G + S P KE AT + +T L+ S T S +++ + A+R+ F +AP+ +S++ FD SYA +R AA L+PN R F+R +G +L + E +P A + + + +L GF +D+R+ D + + D G S++ LV+V+EPATLG ++Q TGE F PD+V TL A + ++ + + +D EYRPNPKDY P E L Y ISL + Sbjct: 3 LMYARLLLVI--SIAPLAVVSWTVNSSSRRQAVHEGVAWIGKATTGLLVVSGIPSQAQA-ARGAAELDFEYYIRSAVSGNKREGNVLPSLSPTPPLPRTLKEPLLSLLLNDDCSASCVPIATLV-QTILQSRSNTQDSNEIERNIQQRLRAYREKARKSFYAKAPWENALVSDQYYFDLTSYALWRTAADLLPNFVDRDRFIRGIGRDLLNNMQE------KGLLPNKSTAIRGSATATIPSMQAVLQTFTSSGFCRDYRIGEAPVLDKKGKIAADAPPVILFDDLDDDALTSGASIDCLVSVLEPATLGASLQITGEQSRFGPDFVGATLSAVWEQADLTSSWEV-FFVDPEYRPNPKDYFPNEQLLQYTISLKQ 367
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|873223347|emb|CEM29174.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 110.153 bits (274), Expect = 3.214e-23 Identity = 84/322 (26.09%), Postives = 149/322 (46.27%), Query Frame = 0 Query: 46 LSRKTMLANGLSSRRTVIDSGATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNL-------RARATFVRQLGE---TVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWD-EGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLY 356 +SR+ LA + + ++ + A+AG + P + G+ E+D + Y +L+ N G + ++ AR LD+ L + + L SGVS ++ E+ + + F +R + D ++ FD +S+ ++VAA IP AR +F +G + E A D++ R YDA+++GL EA++G+ R+L ++ GF++ ++V +Y W L + V+V E A+L + E F PD++ + YL C + + LD ++RPNP DY +E LY Sbjct: 99 VSRRMELAASVLAGLALLPASASAGGI--------PWTGGEKGLGSGELDLQMYLYNLINRNRPMGKTD--PLDFVVARTLDENLVKALKEAAMGELQRVSGVSRRQLQSEMEELLRKRDKLFSQR--YLVTDERDQYAFDLWSWLLWKVAASHIPKGDANDPLGTARRSFQLSIGRRLRDIARARHEALYAGDSEPFMRVYDAEREGLGEAVSGIERMLRVLQKDGFIRSYKVATPEYMDEDWAARSGPLNIQVSVYESASLTASTLLNDERTNFRPDWIGTAVTTYLRDCNLPYNGYEELFLDEKWRPNPADYRVSEQLY 408
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|397581711|gb|EJK52026.1| (hypothetical protein THAOC_28744, partial [Thalassiosira oceanica]) HSP 1 Score: 100.908 bits (250), Expect = 2.456e-20 Identity = 84/300 (28.00%), Postives = 126/300 (42.00%), Query Frame = 0 Query: 67 ATAGKLAAALFLTHPSAAQARIKGAAEIDAEAYFQDLLKGNPLTGGIEQS-------AIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNA------------DDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPK 347 A A AL + PS A +KGAAE D E Y +D GN G + S ++ + ++ S S + + E+ FR FQ P+ + +E FD Y+ +RVA+ I + R FVR +G +L ++ I +K + T + GL + L + IL K GF F++ D+ D G S++ LV+V++ +TLGG +Q GEG F+PD+V L A G + Y +D YRPNPK Sbjct: 26 GAASIFAIALGIPLPSHA---VKGAAEYDLEYYLRDAFMGNNKEGNLPASQGPPPRPPRQLGGPLLPLLLDDQLESCIVMQEFSRISNTPVTELGEEIKIFRNKAARAFQVSHPYVQESVRDEYFFDLTCYSIWRVASVRIQDFSKRDLFVRNVGRKLLDEVIR-LGLIPSKNI-NTLQSGSGGLTDTLPAVIGILELFKSSGFCTKFQLGDKNDEFRTGMLAFDELDDEELRGGGSIDCLVSVLDASTLGGALQINGEGSRFYPDFVGPVLAAIWERAGRVSINYESYFVDPVYRPNPK 320
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|224015615|ref|XP_002297458.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220967871|gb|EED86242.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 98.2117 bits (243), Expect = 1.122e-19 Identity = 71/258 (27.52%), Postives = 116/258 (44.96%), Query Frame = 0 Query: 139 LKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPN-LRARATFVRQLG----ETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRV---------------NADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALC--------------GVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGK 362 ++ LS+ + + ++ A R V+P F R P+ +S+E FD Y+ ++VA+ IPN R FVR +G E + K +++IDA + + + L + + IL + + ++R+ DD + +S G S+ LV++ +P+ LGG +Q TGEG F PD+V TL A GV + Y +D YRPNPKD+ P E YQ ++ + Sbjct: 42 IQELSKITNTPPSTLSEQIKAVRSKVQPAFSARYPWKDELVSDEYYFDLTCYSVWKVASIAIPNDYVKRDEFVRNIGRRILEEAISKEIISKQSIDA--LSKAGEKTGSTLTSTIPCIIEILNLFQSTNYCSNYRLGDKNDEVRTGPGVFDELDDEELSSSSTGGSVNCLVSIYDPSDLGGALQITGEGSRFAPDFVGPTLAAIWERVGGSSSGSGGKKRGEGVVAVQFESYFVDPVYRPNPKDFFPNERFYQYTIAR 297
BLAST of EWM27057.1 vs. NCBI_GenBank
Match: gi|1072236602|gb|OEU21330.1| (hypothetical protein FRACYDRAFT_167495 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 80.8777 bits (198), Expect = 9.792e-15 Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 0 Query: 219 GKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASW-------DEGFSL----EVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGK 362 G I GQ+ + + D L + + +L K G+ K+FR+ + D + S DE ++ LV++ EPATLG ++Q GE F PD+V +L A G + + +D EYRPNPKDY P E L QI+L K Sbjct: 10 GTIQGGQQQMSSNK-----DKNDGALVSTIPAIVEVLELFKRSGYCKNFRIRSSDDNNDSGPIFDELDDESLTIYGTANCLVSIYEPATLGASLQINGENSRFAPDFVGTSLAAIWEKHGGIRSTWDVFFVDPEYRPNPKDYFPNEQLLQITLNK 159 The following BLAST results are available for this feature:
BLAST of EWM27057.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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