EWM27042.1, cds3635 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM27042.1
Unique Name	cds3635
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002461.1:873089..873108 +
Alignment location	CM002461.1:873398..873437 +
Alignment location	CM002461.1:873647..874549 +
Alignment location	CM002461.1:874692..875021 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM27042.1
Product	phosphoenolpyruvate carboxykinase
Orig transcript id	gnl\|cribi\|Naga_100056g12.10455.mrna
Gbkey	CDS
Note	encoded by transcript variant 1; alternatively spliced

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002461.1	supercontig	CM002461.1:873089..873108 +
CM002461.1	supercontig	CM002461.1:873398..873437 +
CM002461.1	supercontig	CM002461.1:873647..874549 +
CM002461.1	supercontig	CM002461.1:874692..875021 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016301	kinase activity
GO:0000166	nucleotide binding
GO:0004611	phosphoenolpyruvate carboxykinase activity
GO:0017076	purine nucleotide binding
GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0005975	carbohydrate metabolic process
GO:0006094	gluconeogenesis

Vocabulary: **INTERPRO**
Term	Definition
IPR015994	PEPCK_ATP_CS
IPR013035	PEP_carboxykinase_C
IPR008210	PEP_carboxykinase_N
IPR001272	PEP_carboxykinase_ATP

Homology

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BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|585109216|gb|EWM27042.1| (phosphoenolpyruvate carboxykinase [Nannochloropsis gaditana])

HSP 1 Score: 902.123 bits (2330), Expect = 0.000e+0
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0

Query:    1 MRRPTRREPLWRMARLPWTQVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            MRRPTRREPLWRMARLPWTQVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV
Sbjct:    1 MRRPTRREPLWRMARLPWTQVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430

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BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|585109217|gb|EWM27043.1| (phosphoenolpyruvate carboxykinase [Nannochloropsis gaditana])

HSP 1 Score: 860.907 bits (2223), Expect = 0.000e+0
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV
Sbjct:  147 KVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 557

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|695434216|ref|XP_009531371.1| (hypothetical protein PHYSODRAFT_562373 [Phytophthora sojae] >gi|348674123|gb|EGZ13942.1| hypothetical protein PHYSODRAFT_562373 [Phytophthora sojae])

HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0
Identity = 323/411 (78.59%), Postives = 364/411 (88.56%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EIE F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS+ENEPDIY AIKRDA+LEN ++D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP  ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIK++ FS DP FGFSVPK L  +  +VL+PR AW+DKAAYDA   KL  MF  N+ KYV+PGVTDYSS GPK+
Sbjct:  160 KVRFITELAWQHHFVTNMFLRPQTKEEIENFEPDFTIVNACKVTNKDYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDEGIFNFEGGCYAKTINLSQENEPDIYNAIKRDALLENTFVDAETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPSNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKDSEFSEDPNFGFSVPKKLGDIPENVLNPREAWSDKAAYDATAKKLAGMFVDNFKKYVSPGVTDYSSFGPKL 570

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|953494839|emb|CEG43480.1| (phosphoenolpyruvate carboxykinase [Plasmopara halstedii])

HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0
Identity = 321/411 (78.10%), Postives = 360/411 (87.59%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RP++  EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKRDA+LENV++D  TK+PD+YNTSKTENGRVSYP+HHI NYEPTS G HP  V+FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL++H T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIK + F+ DP FGF VPK L  +  +VL+PR AW DK AYDA   KL  MF++N+ KYV+PGVTDYS  GPKV
Sbjct:  137 KVRFITELAWQHHFVTNMFLRPKTKDEIANFRPDFTIVNACKVTNKSYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKDGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDEGIFNFEGGCYAKTINLSAENEPDIYNAIKRDALLENVFVDTKTKIPDFYNTSKTENGRVSYPIHHIPNYEPTSSGGHPSNVVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQRHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKKSEFTKDPNFGFEVPKRLGSIPENVLNPREAWNDKDAYDATAKKLAGMFKENFRKYVSPGVTDYSKFGPKV 547

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BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|301107297|ref|XP_002902731.1| (phosphoenolpyruvate carboxykinase [Phytophthora infestans T30-4] >gi|262098605|gb|EEY56657.1| phosphoenolpyruvate carboxykinase [Phytophthora infestans T30-4])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 321/411 (78.10%), Postives = 361/411 (87.83%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKRDA+LEN Y+D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP+ ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIKN+ F  DP FGFSVPK L  +  +VL+PR AW+DK AYD    KL  MFQ+N+ KYV+PGVTDYS  GPK+
Sbjct:  159 KVRFITELAWQHHFVTNMFLRPQTKEEIADFKPDFTIVNACKVTNKNYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPHRYLIGDDEHGWDDEGIFNFEGGCYAKTINLSAENEPDIYNAIKRDALLENTYVDAETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPNNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKNSEFLEDPNFGFSVPKKLGEIPENVLNPREAWSDKEAYDVTAKKLAGMFQENFKKYVSPGVTDYSKFGPKL 569

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|675169351|ref|XP_008893560.1| (phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica INRA-310] >gi|566021848|gb|ETI44759.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica P1569] >gi|567959224|gb|ETK84801.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica] >gi|567987940|gb|ETL38229.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica] >gi|568047550|gb|ETM44628.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica] >gi|568107204|gb|ETN21834.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica INRA-310] >gi|570949348|gb|ETP14605.1| phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica CJ01A1] >gi|970635644|gb|KUF80505.1| Phosphoenolpyruvate carboxykinase [Phytophthora nicotianae] >gi|970658560|gb|KUF96308.1| tubulin polyglutamylase [Phytophthora nicotianae])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 321/411 (78.10%), Postives = 361/411 (87.83%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKRDA+LEN ++D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP  ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIKN+ FS DP FGFSVPK L  +  +VL+PR AW+DK AYD    KL  MFQ+N+ KYV+PGVTDYS  GPK+
Sbjct:  159 KVRFITELAWQHHFVTNMFLRPQTKEEIADFKPDFTIVNACKVTNKDYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDDGIFNFEGGCYAKTINLSAENEPDIYNAIKRDALLENTFVDSETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPSNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKNSEFSEDPNFGFSVPKKLGEIPENVLNPREAWSDKEAYDVTAKKLAGMFQENFKKYVSPGVTDYSKFGPKL 569

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|568017105|gb|ETL91282.1| (phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica])

HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0
Identity = 321/411 (78.10%), Postives = 360/411 (87.59%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKRDA+LEN ++D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP  ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIKN+ FS DP FGFSVPK L  +  +VL+PR AW DK AYD    KL  MFQ+N+ KYV+PGVTDYS  GPK+
Sbjct:  159 KVRFITELAWQHHFVTNMFLRPQTKEEIADFKPDFTIVNACKVTNKDYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDDGIFNFEGGCYAKTINLSAENEPDIYNAIKRDALLENTFVDSETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPSNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKNSEFSEDPNFGFSVPKKLGEIPENVLNPREAWNDKEAYDVTAKKLAGMFQENFKKYVSPGVTDYSKFGPKL 569

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|570982622|gb|ETP42678.1| (phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica P10297])

HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0
Identity = 320/411 (77.86%), Postives = 360/411 (87.59%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKRDA+LEN ++D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP  ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVA TERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIKN+ FS DP FGFSVPK L  +  +VL+PR AW+DK AYD    KL  MFQ+N+ KYV+PGVTDYS  GPK+
Sbjct:  159 KVRFITELAWQHHFVTNMFLRPQTKEEIADFKPDFTIVNACKVTNKDYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDDGIFNFEGGCYAKTINLSAENEPDIYNAIKRDALLENTFVDSETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPSNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVACTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKNSEFSEDPNFGFSVPKKLGEIPENVLNPREAWSDKEAYDVTAKKLAGMFQENFKKYVSPGVTDYSKFGPKL 569

[Close]

BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|570325476|gb|ETO73424.1| (phosphoenolpyruvate carboxykinase (ATP) [Phytophthora parasitica P1976])

HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0
Identity = 320/411 (77.86%), Postives = 360/411 (87.59%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VRF+TE AWQ HFVTNMF+RPQ+ +EI  F PDFTI+NAC+V ++ +K+HG+NSEVFVAFN+EK VA+IGGT+YGGEMKKGIFSMMNYWLPL+GIM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLS ENEPDIY AIKR A+LEN ++D  TK PD+YNTSKTENGRVSYP++HI N+EPTS G HP  ++FLTCDA+GVLPPV+KLS GQAMYHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQKKL+KH T+ YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIKN+ FS DP FGFSVPK L  +  +VL+PR AW+DK AYD    KL  MFQ+N+ KYV+PGVTDYS  GPK+
Sbjct:  159 KVRFITELAWQHHFVTNMFLRPQTKEEIADFKPDFTIVNACKVTNKDYKKHGLNSEVFVAFNIEKDVAVIGGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDDGIFNFEGGCYAKTINLSAENEPDIYNAIKRYALLENTFVDSETKEPDFYNTSKTENGRVSYPIYHIPNHEPTSSGGHPSNIVFLTCDAYGVLPPVSKLSDGQAMYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQKKLQKHNTSVYLVNTGWTSGGYGVGKRMSIKDTRACIDAILDGSIKNSEFSEDPNFGFSVPKKLGEIPENVLNPREAWSDKEAYDVTAKKLAGMFQENFKKYVSPGVTDYSKFGPKL 569

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BLAST of EWM27042.1 vs. NCBI_GenBank
Match: gi|1173944936|gb|OQR93619.1| (phosphoenolpyruvate carboxykinase [Thraustotheca clavata])

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 314/411 (76.40%), Postives = 353/411 (85.89%), Query Frame = 0

Query:   20 QVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANKGKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPKV 430
            +VR +TE AWQ HFVTNMFIR ++ +E+E F PDFTIINAC+V DE +K+HG+NSEVFV FN+EK VAIIGGT+YGGEMKKGIFSMMNYWLPLE IM MHCSANKGK GDTALFFGLSGTGKTTLSADP RYLIGDDEHGWDD GIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENV+ID   + PDYYNTSKTENGRVSYP+HHI+N+EPTS G HP+ +IFLTCDA+GVLPPV+KL+ GQA YHFLSGYTAKVAGTERG+TEP ATFSACFGAAFL LHPTKYADLLQ+K++KH +  YLVNTGWT GGYGVGKRMSIK+TR CIDAILDGSIK + F TDP+FG + PK L  ++  +L+PR AW DKAAYD    KL  MF+ N+ KY++   TDYS  GP V
Sbjct:  146 RVRIITELAWQHHFVTNMFIRAKTKEEVENFQPDFTIINACKVTDEDYKKHGLNSEVFVGFNIEKNVAIIGGTWYGGEMKKGIFSMMNYWLPLEKIMAMHCSANKGKNGDTALFFGLSGTGKTTLSADPQRYLIGDDEHGWDDEGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVWIDENNE-PDYYNTSKTENGRVSYPIHHIDNHEPTSSGGHPNNIIFLTCDAYGVLPPVSKLTAGQAQYHFLSGYTAKVAGTERGVTEPTATFSACFGAAFLPLHPTKYADLLQEKIQKHKSDVYLVNTGWTAGGYGVGKRMSIKDTRACIDAILDGSIKKSEFQTDPIFGLATPKTLGSISPSILNPRDAWEDKAAYDTTAKKLAGMFKANFQKYISKDHTDYSKFGPVV 555

The following BLAST results are available for this feature:

BLAST of EWM27042.1 vs. NCBI_GenBank

BLAST of EWM27042.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585109216\|gb\|EWM27042.1\|	0.000e+0	100.00	phosphoenolpyruvate carboxykinase [Nannochloropsis...	[more]
gi\|585109217\|gb\|EWM27043.1\|	0.000e+0	99.76	phosphoenolpyruvate carboxykinase [Nannochloropsis...	[more]
gi\|695434216\|ref\|XP_009531371.1\|	0.000e+0	78.59	hypothetical protein PHYSODRAFT_562373 [Phytophtho...	[more]
gi\|953494839\|emb\|CEG43480.1\|	0.000e+0	78.10	phosphoenolpyruvate carboxykinase [Plasmopara hals...	[more]
gi\|301107297\|ref\|XP_002902731.1\|	0.000e+0	78.10	phosphoenolpyruvate carboxykinase [Phytophthora in...	[more]
gi\|675169351\|ref\|XP_008893560.1\|	0.000e+0	78.10	phosphoenolpyruvate carboxykinase (ATP) [Phytophth...	[more]
gi\|568017105\|gb\|ETL91282.1\|	0.000e+0	78.10	phosphoenolpyruvate carboxykinase (ATP) [Phytophth...	[more]
gi\|570982622\|gb\|ETP42678.1\|	0.000e+0	77.86	phosphoenolpyruvate carboxykinase (ATP) [Phytophth...	[more]
gi\|570325476\|gb\|ETO73424.1\|	0.000e+0	77.86	phosphoenolpyruvate carboxykinase (ATP) [Phytophth...	[more]
gi\|1173944936\|gb\|OQR93619.1\|	0.000e+0	76.40	phosphoenolpyruvate carboxykinase [Thraustotheca c...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna3644	rna3644	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications