EWM27066.1, cds3623 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM27066.1
Unique Name	cds3623
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002461.1:848116..848218 +
Alignment location	CM002461.1:848343..848418 +
Alignment location	CM002461.1:848878..849112 +
Alignment location	CM002461.1:849352..849424 +
Alignment location	CM002461.1:849565..850241 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM27066.1
Product	glutamate ammonia ligase
Orig transcript id	gnl\|cribi\|Naga_100056g25.10479.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002461.1	supercontig	CM002461.1:848116..848218 +
CM002461.1	supercontig	CM002461.1:848343..848418 +
CM002461.1	supercontig	CM002461.1:848878..849112 +
CM002461.1	supercontig	CM002461.1:849352..849424 +
CM002461.1	supercontig	CM002461.1:849565..850241 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Biological Process**
Term	Definition
GO:0009987	cellular process
GO:0009058	biosynthetic process
GO:0006807	nitrogen compound metabolic process
GO:0006542	glutamine biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003824	catalytic activity
GO:0004356	glutamate-ammonia ligase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027302	Gln_synth_N_conserv_site
IPR027303	Gln_synth_gly_rich_site
IPR008146	Gln_synth_cat_dom
IPR014746	Gln_synth/guanido_kin_cat_dom
IPR008147	Gln_synt_beta

Homology

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|585109240|gb|EWM27066.1| (glutamate ammonia ligase [Nannochloropsis gaditana])

HSP 1 Score: 806.209 bits (2081), Expect = 0.000e+0
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0

Query:    1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGVRGERGKRIGQVWQRGPERFPGRTKRAWWSCQSGAWRVKGWRGATRLASFLMKW 387
            MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGVRGERGKRIGQVWQRGPERFPGRTKRAWWSCQSGAWRVKGWRGATRLASFLMKW
Sbjct:    1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGVRGERGKRIGQVWQRGPERFPGRTKRAWWSCQSGAWRVKGWRGATRLASFLMKW 387

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|298708003|emb|CBJ30365.1| (Glutamate ammonia ligase [Ectocarpus siliculosus])

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 246/334 (73.65%), Postives = 277/334 (82.93%), Query Frame = 0

Query:    1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNN--PDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKD 332
            M NT FS HT LS+EV   F  LPQG    AEYIWIGG+GQDLRCKTRT   K       DLP WN+DGSSTGQAPG+DSEV++ PQA++PDPFRGGDNI+V+CD Y+PD TP+  NTR  CA  M+K + LVPWFGIEQEYTLFEADGVTPFGWPK G+PG QGPYYCS+G ENAFGRHI EAHY+ACLFA +NISG NGEV+PGQWEYQVGP  GI SGD++W+SRY+LQRVCE FGVIVSLDPKPIPGDWNG+GCHTN+ST+PMR+ GG+  II A+EKL  +H EHIAAYGEGNERRLTGKHETASMD FSYGVANRGAS RI R  EK+
Sbjct:    1 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKE 334

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|1173952341|gb|OQS00055.1| (glutamine synthetase [Thraustotheca clavata])

HSP 1 Score: 506.523 bits (1303), Expect = 1.992e-177
Identity = 232/324 (71.60%), Postives = 268/324 (82.72%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G   QAEYIW+GG+G+DLRCKTRTL K   +P DLP+WNFDGSSTGQAPG+DSEV+LKP AI+ DPFR G++ILVMCDCYKPDMTPI  NTR  CA  MK  E  +PWFGIEQEYTLFEAD VTP+GWPKGG+PGAQGPYYC  G  +AFGR IA+AHYRACL+A I +SGIN EV+PGQWEYQVGP  GI++GDQ+W+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G
Sbjct:    2 SKLDRAVYDKYMELETGSFIQAEYIWVGGSGEDLRCKTRTLDKMPKSPADLPIWNFDGSSTGQAPGEDSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDCARVMKACEKEIPWFGIEQEYTLFEADKVTPYGWPKGGYPGAQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIDAGDQLWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMKKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRVAEAEG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|77020844|gb|ABA60428.1| (glutamine synthetase [Leptolegnia chapmanii])

HSP 1 Score: 502.671 bits (1293), Expect = 6.828e-176
Identity = 233/324 (71.91%), Postives = 266/324 (82.10%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G   QAEY+W+GG+G+DLRCKTRTL K   + ++LP+WNFDGSSTGQAPG DSEV+LKP AI+ DPFR G++ILVMCDCYKPDMTPI  NTR   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWPKGGFPG+QGPYYC  G  +AFGR IA+AHYRACL+A I  SGIN EV+PGQWEYQVGP  GIE+GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H EHIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPASVEELPIWNFDGSSTGQAPGADSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPKGGFPGSQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRCSGINAEVMPGQWEYQVGPCTGIEAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMKHIIEALEKLKLKHKEHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASVRIPRTAEADG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|669137686|ref|XP_008604411.1| (glutamine synthetase [Saprolegnia diclina VS20] >gi|530743600|gb|EQC41842.1| glutamine synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 500.36 bits (1287), Expect = 6.294e-175
Identity = 233/324 (71.91%), Postives = 263/324 (81.17%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G   QAEY+W+GG+G+DLRCKTRTL K   +  DLP+WNFDGSSTGQAPG DSEV+LKP AI+ DPFR G++ILVMCDCYKPDMTPI  NTR   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP GG+PG QGPYYC  G  +AFGR IA+AHYRACL+A I ISGIN EV+PGQWEYQVGP  GIESGDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPTSVADLPIWNFDGSSTGQAPGQDSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPVGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRISGINAEVMPGQWEYQVGPCTGIESGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEADG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|813125911|ref|XP_012196860.1| (glutamine synthetase [Saprolegnia parasitica CBS 223.65] >gi|641538575|gb|KDO32406.1| glutamine synthetase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 499.204 bits (1284), Expect = 1.510e-174
Identity = 232/324 (71.60%), Postives = 263/324 (81.17%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G   QAEY+W+GG+G+DLRCKTRTL K   +  DLP+WNFDGSSTGQAPG DSEV+LKP AI+ DPFR G++ILVMCDCYKPDMTPI  NTR   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP GGFPG QGPYYC  G  +AFGR IA+AHYRACL+A I +SGIN EV+PGQWEYQVGP  GIE+GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLEKYPASVADLPIWNFDGSSTGQAPGADSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPVGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIEAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAESDG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|1173953659|gb|OQS01187.1| (glutamine synthetase [Achlya hypogyna])

HSP 1 Score: 498.819 bits (1283), Expect = 2.526e-174
Identity = 230/324 (70.99%), Postives = 265/324 (81.79%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G   QAEY+W+GG+G+DLRCKTRTL K   + ++LP+WNFDGSSTGQAPG DSEV+LKP AIF DPFR G++ILVMCDCYKPDMTPI  NTR   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP+GGFPG QGPYYC  G  +AFGR IA+AHYRACL+A I +SGIN EV+PGQWEYQVGP  GI++GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPASVEELPIWNFDGSSTGQAPGQDSEVMLKPAAIFKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPRGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIDAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRTAEAEG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|1173956198|gb|OQS03050.1| (glutamine synthetase [Thraustotheca clavata])

HSP 1 Score: 494.967 bits (1273), Expect = 7.927e-173
Identity = 227/324 (70.06%), Postives = 265/324 (81.79%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            + L   V+ ++M L  G   QAEYIWIGG+G+DLRCKTRTL K  ++  DLP+WNFDGSSTGQAPG+DSEV+LKP AIF DPFRGG++ILV+CDCYKPDMTPI  NTR   A  M+  ++ VPWFGIEQEYTLFE D VTP+GWPKGG+PG QGPYYC  G  +AFGR IA+AHYRACL+A + +SGIN EV+PGQWEYQVGP  GIESGDQ+W+SRYI+ RVCE FGV VS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIA YG+GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G
Sbjct:    2 SHLDRAVYDQYMKLDTGNYIQAEYIWIGGSGEDLRCKTRTLDKPPSSVADLPIWNFDGSSTGQAPGEDSEVMLKPAAIFKDPFRGGNHILVLCDCYKPDMTPIPSNTRSDAARVMEAAKAHVPWFGIEQEYTLFEKDQVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGVRVSGINAEVMPGQWEYQVGPCTGIESGDQLWISRYIMLRVCEDFGVFVSFDPKPIPGDWNGAGCHTNVSTKAMREAGGMAKIIEALEKLKLKHKVHIAVYGQGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEAEG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|1214691077|gb|OWZ06105.1| (Glutamine synthetase [Phytophthora megakarya])

HSP 1 Score: 494.967 bits (1273), Expect = 8.014e-173
Identity = 229/324 (70.68%), Postives = 263/324 (81.17%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ ++M L  G A  AEY+WIGG+GQDLRCKT+TL K+  +  DLP+WNFDGSSTGQAPG+DSEVLL+P AIF DPFR G +ILV+CDC KPDMTPI  NTR   A  MK  ES  PWFGIEQEYTLFE DGVTP+GWPKGGFPG QGPYYC  G  + FGR I +AHYRA L+A INISGIN EV+PGQWEYQVGP  GIESGD +W+SRYIL RVCE FGV VS DPKPIPGDWNG+GCHTN+ST+ MR+ GG   II+A+EK++ +H EHIAAYG GNERRLTG+HETASMD+FSYGVANRGAS RIPR AE +G
Sbjct:    2 SKLDRAVYDQYMTLDTGSATLAEYVWIGGSGQDLRCKTKTLTKEIKSVADLPIWNFDGSSTGQAPGEDSEVLLRPVAIFKDPFRRGKHILVLCDCLKPDMTPIANNTRADAARVMKAAESEQPWFGIEQEYTLFEKDGVTPYGWPKGGFPGPQGPYYCGAGAHSVFGRLIVDAHYRASLYAGINISGINAEVMPGQWEYQVGPCTGIESGDHLWMSRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTQAMREEGGMAKIIEAIEKMKLKHKEHIAAYGTGNERRLTGRHETASMDTFSYGVANRGASIRIPRVAEAEG 325

[Close]

BLAST of EWM27066.1 vs. NCBI_GenBank
Match: gi|698792574|ref|XP_009829319.1| (hypothetical protein H257_05979 [Aphanomyces astaci] >gi|574115976|gb|ETV81461.1| hypothetical protein H257_05979 [Aphanomyces astaci])

HSP 1 Score: 493.426 bits (1269), Expect = 3.146e-172
Identity = 231/324 (71.30%), Postives = 259/324 (79.94%), Query Frame = 0

Query:   10 TQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333
            ++L   V+ R+M+L  G + QAEYIWIGG+G+DLRCKTRTL K   +  DLP WNFDGSST QAPG DSEVLLKP AI+ DPFRGG +ILV+CDCYKPD TPI  NTR      M    S VPWFGIEQEYTLFEAD VTP+GWPK G+PG QGPYYC  G  +AFGR I +AHYRACL+A I ISGIN EV+PGQWEYQVGP VGI SGDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H EHIAAYG GNERRLTG+HETAS+D FSYGVA+RGAS RIPR  E DG
Sbjct:    2 SKLDRAVYDRYMSLDTGSSVQAEYIWIGGSGEDLRCKTRTLEKSPASVADLPDWNFDGSSTNQAPGQDSEVLLKPAAIYKDPFRGGKHILVLCDCYKPDGTPIPSNTRHDALRVMNASASHVPWFGIEQEYTLFEADKVTPYGWPKAGYPGPQGPYYCGAGAHSAFGRLIVDAHYRACLYAGIKISGINAEVMPGQWEYQVGPCVGIASGDQMWMSRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTQAMREEGGIAAIIEALEKLKLKHKEHIAAYGTGNERRLTGRHETASIDKFSYGVADRGASIRIPRTTEADG 325

The following BLAST results are available for this feature:

BLAST of EWM27066.1 vs. NCBI_GenBank

BLAST of EWM27066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585109240\|gb\|EWM27066.1\|	0.000e+0	100.00	glutamate ammonia ligase [Nannochloropsis gaditana...	[more]
gi\|298708003\|emb\|CBJ30365.1\|	0.000e+0	73.65	Glutamate ammonia ligase [Ectocarpus siliculosus]	[more]
gi\|1173952341\|gb\|OQS00055.1\|	1.992e-177	71.60	glutamine synthetase [Thraustotheca clavata]	[more]
gi\|77020844\|gb\|ABA60428.1\|	6.828e-176	71.91	glutamine synthetase [Leptolegnia chapmanii]	[more]
gi\|669137686\|ref\|XP_008604411.1\|	6.294e-175	71.91	glutamine synthetase [Saprolegnia diclina VS20] >g...	[more]
gi\|813125911\|ref\|XP_012196860.1\|	1.510e-174	71.60	glutamine synthetase [Saprolegnia parasitica CBS 2...	[more]
gi\|1173953659\|gb\|OQS01187.1\|	2.526e-174	70.99	glutamine synthetase [Achlya hypogyna]	[more]
gi\|1173956198\|gb\|OQS03050.1\|	7.927e-173	70.06	glutamine synthetase [Thraustotheca clavata]	[more]
gi\|1214691077\|gb\|OWZ06105.1\|	8.014e-173	70.68	Glutamine synthetase [Phytophthora megakarya]	[more]
gi\|698792574\|ref\|XP_009829319.1\|	3.146e-172	71.30	hypothetical protein H257_05979 [Aphanomyces astac...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna3632	rna3632	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications