EWM27044.1, cds3612 (CDS) Nannochloropsis gaditana

Overview
NameEWM27044.1
Unique Namecds3612
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:827346..827348 +
Alignment locationCM002461.1:827713..827897 +
Alignment locationCM002461.1:828083..828248 +
Alignment locationCM002461.1:828405..828599 +
Alignment locationCM002461.1:828830..829669 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27044.1
Producteukaryotic translation initiation factor 2 subunit 3
Orig transcript idgnl|cribi|Naga_100056g37.10457.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:827346..827348 +
CM002461.1supercontigCM002461.1:827713..827897 +
CM002461.1supercontigCM002461.1:828083..828248 +
CM002461.1supercontigCM002461.1:828405..828599 +
CM002461.1supercontigCM002461.1:828830..829669 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR027417P-loop_NTPase
IPR015256TIF2_gsu_C
IPR004161Transl_elong_EFTu/EF1A_2
IPR000795TF_GTP-bd_dom
Homology
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|585109218|gb|EWM27044.1| (eukaryotic translation initiation factor 2 subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 939.873 bits (2428), Expect = 0.000e+0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0
Query:    1 MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATAGEGKEDPAV 462
            MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATAGEGKEDPAV
Sbjct:    1 MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATAGEGKEDPAV 462          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|676383591|ref|XP_009035074.1| (hypothetical protein AURANDRAFT_22992 [Aureococcus anophagefferens] >gi|323454389|gb|EGB10259.1| hypothetical protein AURANDRAFT_22992 [Aureococcus anophagefferens])

HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0
Identity = 349/452 (77.21%), Postives = 384/452 (84.96%), Query Frame = 0
Query:    1 MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGK--TWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINV 450
            ++  D S+L+P TPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIYK    + G PGN+R+ GSS PD F +      W+L RHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDLVKP  A  QH+QI+KFVAGTVADA+PIIPISAV K+N+D VCEYL + IP P RDF S PRLIVIRSFDVNKPGE VE LKGGVAGGSILQGVL++GD++EVRPGIV KDA+G V C PI+S++ SLFAE N L +AVPGGLIGVGT IDPTLTRADRLVGQVLGL+  LPDV+ EVEIS+YLLRRLLGVKT +G KQAKVQKL  +EILMVNIGSTATGGKVL      A + D AKILLTQPVCT EGEKIALSRRVDKHWRLIGWGQIRRG  +++
Sbjct:   23 LATLDVSSLSPATPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKRVDEQPG-PGNFRSFGSSKPDAFTDPATKIAWKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIKKFVAGTVADAAPIIPISAVLKYNVDAVCEYLAHAIPTPARDFASLPRLIVIRSFDVNKPGEDVEHLKGGVAGGSILQGVLKMGDEVEVRPGIVKKDAQGTVSCTPIYSKVVSLFAESNALQYAVPGGLIGVGTHIDPTLTRADRLVGQVLGLKAHLPDVFIEVEISFYLLRRLLGVKTSEGSKQAKVQKLQKQEILMVNIGSTATGGKVL------AVKADLAKILLTQPVCTMEGEKIALSRRVDKHWRLIGWGQIRRGARVDI 467          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|635368668|emb|CCI43228.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0
Identity = 347/447 (77.63%), Postives = 388/447 (86.80%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVF--EEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATA 453
            L+PLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIYK +  E G+ G YRA GSS PD F  E D K W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+NID+VCEY+V  IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSILQGVLRV D+IEVRPGIV+K+  G V CVPIFS+I SLFAE N+L +AVPGGLIGVGT IDPTLTR+DRLVGQVLG++G LPDV+TE+EI++YLL+RLLGVKTQDG K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKILLT PVCTQEGEKIA+SRR++KHWRLIGWGQIRRG+ I + +A
Sbjct:   19 LSPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKTE-NENGI-GCYRAFGSSKPDTFVDEVDQKKWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKKDVAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYIVRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILQGVLRVNDEIEVRPGIVSKNDDGKVTCVPIFSRIVSLFAEKNDLQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGIKGNLPDVFTELEINFYLLKRLLGVKTQDGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKILLTVPVCTQEGEKIAISRRIEKHWRLIGWGQIRRGSRIEITSA 457          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|669155404|ref|XP_008613264.1| (eukaryotic translation initiation factor 2 subunit 3 [Saprolegnia diclina VS20] >gi|530734899|gb|EQC33141.1| eukaryotic translation initiation factor 2 subunit 3 [Saprolegnia diclina VS20])

HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0
Identity = 343/457 (75.05%), Postives = 390/457 (85.34%), Query Frame = 0
Query:    1 MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPA----EEGVPG-NYRAKGSSAPDVF-EEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVA 451
            +S  DP TLTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+ +PA    +E   G  Y A GSS PD F +E G TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDL+KP  A  Q++Q+++FVAGTVA  +PIIPISAV K+NID+VCEY+V  IP+P RDF S P+LIVIRSFDVNKPG+ VE+L+GGVAGGSILQGVLR+GD+IEVRPGI +KD  G V+C PIFS+I SL AEHNEL +AVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LPD++TE+EI++YLLRRLLGVKT +G K +KVQKL   E+LM+NIGST TG K++      A ++D AKILLTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRG  I++A
Sbjct:   11 LSALDPKTLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPAPAKADEAPTGPMYSAFGSSKPDRFTDEKGVTWALQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQYEQVKQFVAGTVAHDAPIIPISAVLKYNIDVVCEYIVRNIPIPRRDFVSKPKLIVIRSFDVNKPGQDVENLQGGVAGGSILQGVLRIGDEIEVRPGIYSKDEDGKVQCTPIFSRIVSLKAEHNELQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGLKGSLPDIFTELEINFYLLRRLLGVKTSEGSKASKVQKLTKAEVLMINIGSTTTGAKII------AVKQDLAKILLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGVKIDIA 461          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|813149122|ref|XP_012200208.1| (eukaryotic translation initiation factor 2 subunit 3 [Saprolegnia parasitica CBS 223.65] >gi|641535114|gb|KDO29038.1| eukaryotic translation initiation factor 2 subunit 3 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 343/457 (75.05%), Postives = 390/457 (85.34%), Query Frame = 0
Query:    1 MSVPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPA----EEGVPG-NYRAKGSSAPDVF-EEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVA 451
            +S  DP TLTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+ +PA    +E   G  Y A GSS PD F +E G TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDL+KP  A  Q++Q+++FVAGTVA  +PIIPISAV K+NID+VCEY+V  IP+P RDF S P+LIVIRSFDVNKPG+ VE+L+GGVAGGSILQGVLR+GD+IEVRPGI +KD  G V+C PIFS+I SL AEHNEL +AVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LPD++TE+EI++YLLRRLLGVKT +G K +KVQKL   E+LM+NIGST TG K++      A ++D AKILLTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRG  I++A
Sbjct:   14 LSALDPKTLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPAPAKADEAPTGPMYSAFGSSKPDRFTDEKGVTWALQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQYEQVKQFVAGTVAHDAPIIPISAVLKYNIDVVCEYIVRNIPIPRRDFVSKPKLIVIRSFDVNKPGQDVENLQGGVAGGSILQGVLRIGDEIEVRPGIYSKDEDGKVQCTPIFSRIVSLKAEHNELQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGLKGSLPDIFTELEINFYLLRRLLGVKTSEGSKASKVQKLTKAEVLMINIGSTTTGAKII------AVKQDLAKILLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGVKIDIA 464          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|953503329|emb|CEG36097.1| (eukaryotic translation initiation factor 2 subunit 3 [Plasmopara halstedii])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 348/449 (77.51%), Postives = 390/449 (86.86%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVP-GNYRAKGSSAPDVF--EEDGK-TWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATA 453
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+   AE GV  G YRA GSS PD F  E D K TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+N+D+VCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVLRVGD+IEVRPGIV+KD +G + CVPIFS+I SL+AE N+L FAVPGGLIGVGT+IDPTLTR+DRLVGQVLGL+G LP V+TE+EI++YLL+RLLGVKTQ+G K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKI+LT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I +A A
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGVGIGCYRAFGSSKPDRFVDENDDKLTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDVAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTQIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKIVLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADA 461          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|695389766|ref|XP_009519528.1| (hypothetical protein PHYSODRAFT_325378 [Phytophthora sojae] >gi|348684425|gb|EGZ24240.1| hypothetical protein PHYSODRAFT_325378 [Phytophthora sojae])

HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0
Identity = 347/449 (77.28%), Postives = 388/449 (86.41%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVP-GNYRAKGSSAPDVF--EEDGKT-WRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATA 453
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+   AE G   G YRA GSS PD F  E D KT W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+N+D+VCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVLRVGD+IEVRPGIV+KD +G + CVPIFS+I SL+AE N+L FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP V+TE+EI++YLL+RLLGVKTQ+G K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I +A +
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGTGIGCYRAFGSSKPDRFTDENDDKTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADS 461          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|1214712199|gb|OWZ23155.1| (Eukaryotic translation initiation factor 2 subunit 3 [Phytophthora megakarya])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 345/449 (76.84%), Postives = 387/449 (86.19%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVP-GNYRAKGSSAPDVF---EEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATA 453
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+   AE G   G YRA GSS PD F    +D  TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+N+D+VCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVLRVGD+IEVRPGIV+KD +G + CVPIFS+I SL+AE N+L FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP V+TE+EI++YLL+RLLGVKTQ+G K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I +A +
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGSGIGCYRAFGSSKPDRFVDESDDKTTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADS 461          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|301105599|ref|XP_002901883.1| (eukaryotic translation initiation factor 2 subunit 3 [Phytophthora infestans T30-4] >gi|262099221|gb|EEY57273.1| eukaryotic translation initiation factor 2 subunit 3 [Phytophthora infestans T30-4])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 348/447 (77.85%), Postives = 387/447 (86.58%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVP-GNYRAKGSSAPDVF--EEDGKT-WRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVA 451
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+   AE G   G YRA GSS PD F  E D KT W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+N+D+VCEY+   IPVP RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVLRVGD+IEVRPGIV+KD +G + CVPIFS+I SL+AE N+L FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP V+TE+EI++YLL+RLLGVKTQ+G K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I +A
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGTGIGCYRAFGSSKPDRFVDENDEKTTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPVPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIA 459          
BLAST of EWM27044.1 vs. NCBI_GenBank
Match: gi|675165333|ref|XP_008891551.1| (eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica INRA-310] >gi|675165335|ref|XP_008891552.1| eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica INRA-310] >gi|568107652|gb|ETN22276.1| eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica INRA-310] >gi|568107653|gb|ETN22277.1| eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0
Identity = 347/449 (77.28%), Postives = 388/449 (86.41%), Query Frame = 0
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVP-GNYRAKGSSAPDVF--EEDGK-TWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEVEISYYLLRRLLGVKTQDGGKQAKVQKLAAKEILMVNIGSTATGGKVLGLREDAARREDYAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTINVATA 453
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKIY+   AE G   G YRA GSS PD F  E D K TW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  QH+QI+KFVAGTVA  +PIIPISAV K+N+D+VCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVLRVGD+IEVRPGIV+KD +G + CVPIFS+I SL+AE N+L FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP V+TE+EI++YLL+RLLGVKTQ+G K +KVQKL+  E+LMVNIGSTATGGKVL      A ++D AKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I +A +
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGTGIGCYRAFGSSKPDRFVDENDEKMTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVL------AVKQDLAKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADS 461          
The following BLAST results are available for this feature:
BLAST of EWM27044.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109218|gb|EWM27044.1|0.000e+0100.00eukaryotic translation initiation factor 2 subunit... [more]
gi|676383591|ref|XP_009035074.1|0.000e+077.21hypothetical protein AURANDRAFT_22992 [Aureococcus... [more]
gi|635368668|emb|CCI43228.1|0.000e+077.63unnamed protein product [Albugo candida][more]
gi|669155404|ref|XP_008613264.1|0.000e+075.05eukaryotic translation initiation factor 2 subunit... [more]
gi|813149122|ref|XP_012200208.1|0.000e+075.05eukaryotic translation initiation factor 2 subunit... [more]
gi|953503329|emb|CEG36097.1|0.000e+077.51eukaryotic translation initiation factor 2 subunit... [more]
gi|695389766|ref|XP_009519528.1|0.000e+077.28hypothetical protein PHYSODRAFT_325378 [Phytophtho... [more]
gi|1214712199|gb|OWZ23155.1|0.000e+076.84Eukaryotic translation initiation factor 2 subunit... [more]
gi|301105599|ref|XP_002901883.1|0.000e+077.85eukaryotic translation initiation factor 2 subunit... [more]
gi|675165333|ref|XP_008891551.1|0.000e+077.28eukaryotic translation initiation factor 2 subunit... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3621rna3621Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications