EWM27031.1, cds3611 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|585109205|gb|EWM27031.1| (hypothetical protein Naga_100056g38 [Nannochloropsis gaditana]) HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query: 1 MHQVILKLSRHICFGWRQGQRNWRNKYSIVLCRTQPFWMTMRRTAPSSGLPLGLLLLTCLVTCRGFAFQPLGGSHASTLHKTKAATSAPDDVSVAKRTAALMVPPLPSRSGREGKGEGGQTQLGASPTFYLARFAMALVPSSVTALGIGFGALAPALVAPVPAVHAQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPEIKGCWVMVATGHHKFNLKRTHQDWLKL 350
MHQVILKLSRHICFGWRQGQRNWRNKYSIVLCRTQPFWMTMRRTAPSSGLPLGLLLLTCLVTCRGFAFQPLGGSHASTLHKTKAATSAPDDVSVAKRTAALMVPPLPSRSGREGKGEGGQTQLGASPTFYLARFAMALVPSSVTALGIGFGALAPALVAPVPAVHAQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPEIKGCWVMVATGHHKFNLKRTHQDWLKL
Sbjct: 1 MHQVILKLSRHICFGWRQGQRNWRNKYSIVLCRTQPFWMTMRRTAPSSGLPLGLLLLTCLVTCRGFAFQPLGGSHASTLHKTKAATSAPDDVSVAKRTAALMVPPLPSRSGREGKGEGGQTQLGASPTFYLARFAMALVPSSVTALGIGFGALAPALVAPVPAVHAQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPEIKGCWVMVATGHHKFNLKRTHQDWLKL 350
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|873227210|emb|CEM19210.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 189.119 bits (479), Expect = 1.460e-54 Identity = 97/183 (53.01%), Postives = 123/183 (67.21%), Query Frame = 0
Query: 140 PSSVTALGIGFGALAPALVAPVPAVHAQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCP 322
P+ TA G L P AV +Q+ K+ G ASTL+ G +TRGVN+E ++F G+DL+ VSFQQS+VR+ NF K L ASFFDADL+NADFTGANM NLELANL+GA F+DA+V EAY +G+T + IE +D+S TFLRKDQQ YLC A G N +T ++T +SL CP
Sbjct: 91 PAQRTAASYANGGLFSLRGLPADAVPSQSGGKTKVVAGGASTLDQGRATIITRGVNLEGSDFSGQDLSGVSFQQSVVRNSNFAQTKLLGASFFDADLANADFTGANMKLVNLELANLRGASFRDAIVTEAYTTGSTSFGENDIENADFSETFLRKDQQKYLCGIAKGTNAVTGVATADSLNCP 273
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|298715141|emb|CBJ27829.1| (Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) [Ectocarpus siliculosus]) HSP 1 Score: 186.422 bits (472), Expect = 8.225e-54 Identity = 92/155 (59.35%), Postives = 119/155 (76.77%), Query Frame = 0
Query: 170 TDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLC--KRASGVNPITKISTKESLLCP 322
+D K+ G+AST + G KT+TRGVNIENA++ KDL++VSFQQSLVR NF+ AK ++A FFDADLSN +F ANM+QANLELANL GA K+A+V EAYVSGAT++ IEG+D++ TFLRKDQ YLC + A G NP++ + T++SL CP
Sbjct: 91 SDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDADLSNCNFESANMNQANLELANLSGANMKNALVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|544214888|ref|XP_005537590.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449018152|dbj|BAM81554.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 177.563 bits (449), Expect = 1.615e-49 Identity = 88/152 (57.89%), Postives = 111/152 (73.03%), Query Frame = 0
Query: 172 FKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPE 323
FK+ G ASTL +GT K +TRGVN+E ANF +DL VSFQQS+VRD +F G+ ASFFDAD S A+F AN+ +ANLELANL+ A ++A++ AYV G T+L IQIEGSDW+ LR DQ+ LCKRASG NP+T I+TK+SL C +
Sbjct: 170 FKVPGGGASTLATGTSKIVTRGVNLEGANFAKQDLHGVSFQQSIVRDVDFSGSNLQDASFFDADCSGANFQNANLSRANLELANLRKADLRNAILTNAYVVGQTKLEGIQIEGSDWTDVLLRPDQRRLLCKRASGENPVTHIATKDSLGCAD 321
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|551667882|ref|XP_005836701.1| (hypothetical protein GUITHDRAFT_135885 [Guillardia theta CCMP2712] >gi|428180855|gb|EKX49721.1| hypothetical protein GUITHDRAFT_135885 [Guillardia theta CCMP2712]) HSP 1 Score: 169.474 bits (428), Expect = 2.583e-47 Identity = 85/166 (51.20%), Postives = 114/166 (68.67%), Query Frame = 0
Query: 160 PVPAVHAQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPEIK 325
P+PA AQ FK+ KG+AST +SG+ +T+TRG +E +NF+G++L +SFQQSL RD +F G ASFFD DL+NA+ GA++ N EL +K A K+A+V AY+ T+L I IEG+D++ T LRKDQQ YLCKRASG NP T + TK+SL C +K
Sbjct: 80 PIPA-FAQQGGSFKVLKGAASTQDSGSRRTITRGALLEGSNFDGQNLPGISFQQSLCRDCSFVGTNLKGASFFDGDLTNANMEGADVSNVNFELTCMKDANLKNAIVNNAYIQSTTKLDGINIEGADFTDTELRKDQQRYLCKRASGTNPKTGVDTKDSLRCSMLK 244
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|1210527302|dbj|GAX13937.1| (hypothetical protein FisN_5Lh159 [Fistulifera solaris]) HSP 1 Score: 162.54 bits (410), Expect = 4.183e-45 Identity = 80/155 (51.61%), Postives = 108/155 (69.68%), Query Frame = 0
Query: 171 DFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQ-IEGSDWSGTFLRKDQQTYLCKR--ASGVNPITKISTKESLLCP 322
+ KI+KG ASTL SG ++TRGVN++ +NF G++L V+FQQS+VRD NF+ + + ASFFDA L ++F A+M NLELA L A ++A+ RE YVSG+T I+ IE SDW+ T+LR DQQ YLC A G NP+T + T+ESL+CP
Sbjct: 49 EMKIQKGGASTLQSGRTISITRGVNLDGSNFAGQNLKGVAFQQSIVRDANFKKSNLVGASFFDATLDGSNFDDADMTMVNLELAQLNRASMRNAVAREMYVSGSTLFEGIKDIENSDWTDTYLRADQQKYLCNHPTAKGTNPVTGVDTRESLMCP 203
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|1210523824|dbj|GAX17506.1| (hypothetical protein FisN_5Hh159 [Fistulifera solaris]) HSP 1 Score: 160.999 bits (406), Expect = 1.595e-44 Identity = 80/155 (51.61%), Postives = 107/155 (69.03%), Query Frame = 0
Query: 171 DFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQ-IEGSDWSGTFLRKDQQTYLCKR--ASGVNPITKISTKESLLCP 322
+ KI+KG ASTL SG ++TRGVN++ +NF G++L V+FQQS+VRD NF + + ASFFDA L ++F A+M NLELA L A ++A+ RE YVSG+T I+ IE SDW+ T+LR DQQ YLC A G NP+T + T+ESL+CP
Sbjct: 49 EMKIQKGGASTLQSGRTISITRGVNLDGSNFAGQNLKGVAFQQSIVRDANFAKSNLVGASFFDATLDGSNFDDADMTMVNLELAQLNRASMRNAVAREMYVSGSTLFEGIKDIENSDWTDTYLRADQQKYLCNHPTAKGTNPVTGVDTRESLMCP 203
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|224006618|ref|XP_002292269.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971911|gb|EED90244.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 154.451 bits (389), Expect = 2.352e-41 Identity = 80/171 (46.78%), Postives = 112/171 (65.50%), Query Frame = 0
Query: 160 PVPAVHAQTD------TDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQ-IEGSDWSGTFLRKDQQTYLCKR--ASGVNPITKISTKESLLC 321
P P++ AQ ++ K+ G ASTL SG ++TRGVN++N+NF ++L V+FQQS+VRD +F + ASFFDA L ++F A+M N+E+A A K+A+V++ YVSGAT ++ IEGSDWS T LRKDQQ YLC A G NP+T ++T+ESL+C
Sbjct: 83 PQPSIAAQNGDGASLASNAKLTTGGASTLQSGRTISITRGVNLDNSNFSNQNLKGVAFQQSIVRDSDFSNSNLYGASFFDATLDGSNFENADMTLCNVEMAQFNRANLKNAIVKDMYVSGATLFEGVKDIEGSDWSETQLRKDQQKYLCNHPTAKGTNPVTGVNTRESLMC 253
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|545704499|ref|XP_005704572.1| (thylakoid lumenal protein [Galdieria sulphuraria] >gi|452821017|gb|EME28052.1| thylakoid lumenal protein [Galdieria sulphuraria]) HSP 1 Score: 150.214 bits (378), Expect = 4.035e-40 Identity = 77/151 (50.99%), Postives = 109/151 (72.19%), Query Frame = 0
Query: 173 KIKKGSAST--LNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLC 321
K+ G+AS+ ++G +T+TRGVN+ A+F +DL+ VSFQQSL+R+ +F GAK +SASFF A+LS A+ A++ +ANLELANL+ A K+A++R AY SG TRL ++ I+G+D+S LRKDQ+ YLC A+G N T + TK SL C
Sbjct: 64 KVGGGAASSGKTSTGVSRTVTRGVNLSGADFSEQDLSGVSFQQSLLRETDFHGAKLVSASFFGAELSYANLEDADLTEANLELANLRSAKLKNAVLRRAYFSGNTRLENVDIDGADFSEVILRKDQKKYLCNIANGTNSHTGVETKTSLGC 214
BLAST of EWM27031.1 vs. NCBI_GenBank
Match: gi|1072231020|gb|OEU15753.1| (hypothetical protein FRACYDRAFT_187021 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 145.976 bits (367), Expect = 6.120e-39 Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 0
Query: 156 ALVAPVPAVH---AQTDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSNADFTGANMDQANLELANLKGAIFKDAMVREAYVSGATRLTDIQ-IEGSDWSGTFLRKDQQTYLCKR--ASGVNPITKISTKESLLCPE 323
+ P AV A T + KI G ASTL SG +TRGVN++ ++F ++L V+FQQS+VRD NF+G +SFFDA L ++F A+M +N+E+A A + ++RE YVSG+T I+ IEGSDWS T+LR DQ+ LC+ + G NP+T ++T+ESL+C +
Sbjct: 14 SFTEPAFAVEGGGATTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFSNQNLKGVAFQQSIVRDSNFKGCNLYGSSFFDATLDGSNFEDADMSLSNVEMAQFNRANLHNTIMREVYVSGSTLFEGIKDIEGSDWSETYLRADQKKLLCEHPTSKGTNPVTGVNTRESLMCKD 187 The following BLAST results are available for this feature:
BLAST of EWM27031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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