EWM30635.1, cds36 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|585113320|gb|EWM30635.1| (alternative oxidase [Nannochloropsis gaditana]) HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MLARAVLPTRSGSLAAAFLKTSSATIMPPKQLQGLSRTLQVKSYRQSTVFYRAMSTTLKPEERAGTFTPAAPSTTTQEKEELRDGARSIIHFKLSPNRHALNVPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLAEEEYRAKITTMGQPTPVAEKKA 369 MLARAVLPTRSGSLAAAFLKTSSATIMPPKQLQGLSRTLQVKSYRQSTVFYRAMSTTLKPEERAGTFTPAAPSTTTQEKEELRDGARSIIHFKLSPNRHALNVPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLAEEEYRAKITTMGQPTPVAEKKA Sbjct: 1 MLARAVLPTRSGSLAAAFLKTSSATIMPPKQLQGLSRTLQVKSYRQSTVFYRAMSTTLKPEERAGTFTPAAPSTTTQEKEELRDGARSIIHFKLSPNRHALNVPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLAEEEYRAKITTMGQPTPVAEKKA 369
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|551675970|ref|XP_005840739.1| (hypothetical protein GUITHDRAFT_100729 [Guillardia theta CCMP2712] >gi|428184905|gb|EKX53759.1| hypothetical protein GUITHDRAFT_100729 [Guillardia theta CCMP2712]) HSP 1 Score: 333.569 bits (854), Expect = 4.732e-107 Identity = 150/268 (55.97%), Postives = 196/268 (73.13%), Query Frame = 0 Query: 88 SIIHFKLSPNRHALNVPKLDPKEK-VWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLAEEEYRAK 354 ++HFK++PNRH+L V K+ EK VW+NP HSVW++EE+ V+ TH+ P D +AY QT R+ FD L+G+K + TE +NR +FLETVAG+PGM GM+RHL SLR M RDHGWIHTLLEEAENERMHLLTF+ +K+PGP+FR AVL QGVF N+FF++YLI PKICHR VG++EEEAV+TYT I+ +D G+L F + P IA+ YW + PDAT RDL L +R DEA HR+VNH FA+L ++ NP + + + + Sbjct: 92 DMVHFKVTPNRHSLGVKKVSTGEKDVWDNPFQHSVWSEEEIYAVQKTHVDPKDTADSIAYRAVQTARWMFDTLSGYKIGQLTESKVINRAIFLETVAGVPGMVGGMLRHLRSLRTMTRDHGWIHTLLEEAENERMHLLTFVTIKKPGPIFRWAVLGTQGVFMNLFFVTYLIYPKICHRFVGYLEEEAVKTYTDILNAIDDGRLSSFRNARAPQIAIDYWHMKPDATMRDLFLVVRADEANHRDVNHMFASLGLHETNPLVKKSSAKKR 359
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|551676263|ref|XP_005840885.1| (hypothetical protein GUITHDRAFT_100154 [Guillardia theta CCMP2712] >gi|428185052|gb|EKX53905.1| hypothetical protein GUITHDRAFT_100154 [Guillardia theta CCMP2712]) HSP 1 Score: 322.398 bits (825), Expect = 4.156e-106 Identity = 147/260 (56.54%), Postives = 192/260 (73.85%), Query Frame = 0 Query: 88 SIIHFKLSPNRHALNVPKLDPKEK-VWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFL 346 ++HFK S N+H L V K +K +WENP HHSVWT EEV V TH P R+A++ + R+SFD +GF+F + TE ++R+ FLETVA +PGM AGM+RHL SLRRM RDHGWIHTLLEEAENERMHLLTF++LK+P FR AV+ QG+F N+FF++Y+ +P+ CHR VG++EEEAV+TYT II E+D G+L + P IA+ YW L PDA+ RDL+LA+R DEA HR+VNHTFA+LK+N+ NP++ Sbjct: 9 DMVHFKTSTNKHPLGVSKTVVGDKPIWENPMHHSVWTDEEVNGVRKTHKPIEGLADRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETVAAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVATQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAIDYWHLRPDASMRDLMLAVRMDEANHRDVNHTFASLKKNEINPYV 268
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|551666398|ref|XP_005835960.1| (hypothetical protein GUITHDRAFT_68249 [Guillardia theta CCMP2712] >gi|551666400|ref|XP_005835961.1| hypothetical protein GUITHDRAFT_68214 [Guillardia theta CCMP2712] >gi|428180112|gb|EKX48980.1| hypothetical protein GUITHDRAFT_68249 [Guillardia theta CCMP2712] >gi|428180113|gb|EKX48981.1| hypothetical protein GUITHDRAFT_68214 [Guillardia theta CCMP2712]) HSP 1 Score: 306.605 bits (784), Expect = 1.620e-100 Identity = 139/239 (58.16%), Postives = 178/239 (74.48%), Query Frame = 0 Query: 119 HSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLAEEEYRAKITT 357 HSVWT+EEV +++ TH P D RVA + R+SFD +G++F TE +NR+ FLETVAG+PGM AGM+RHL SLR M RDHGWIHTLLEEAENERMHLLTF++L+RPGPLFRAAV+ QGVF NVFFL YL++P+ CHR VG++EEEAV+TYT II +D G+L + P IA+ YW L P+AT RDL+LA+R DEA HR+VNHT + LK ++ NP++ E A+ ++ Sbjct: 3 HSVWTEEEVNSIKKTHKKPEDMVDRVALAAVKAARWSFDTFSGYRFGNLTEGKVINRICFLETVAGVPGMTAGMLRHLRSLRIMDRDHGWIHTLLEEAENERMHLLTFVKLRRPGPLFRAAVVGTQGVFMNVFFLCYLVSPRFCHRFVGYLEEEAVKTYTDIINAIDDGRLGHWKTQAAPQIAIDYWHLKPEATMRDLMLAVRADEACHRDVNHTLSGLKVDETNPYVLEHAQAAQQSS 241
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|514694217|ref|XP_004994680.1| (alternative oxidase [Salpingoeca rosetta] >gi|326427287|gb|EGD72857.1| alternative oxidase [Salpingoeca rosetta]) HSP 1 Score: 307.375 bits (786), Expect = 1.020e-99 Identity = 146/275 (53.09%), Postives = 193/275 (70.18%), Query Frame = 0 Query: 75 TTQEKEELRDGAR--SIIHFKLSPNRHALNVPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFLA 347 T+++ E+L S+ HF+ S N H L D VW NP + VW++EEV++V+VTH+ P D RVAY + + +R FD+ +G+ F E +L R++FLETVAGIPGM AG +RHL SLR M+RDHGWIHTLLEEAENERMHLLTFM+L+ PG LFR VL QGVF+N++FL YL +P+ CHR VG++EEEAV+TYT I+ +D G +P + + P IA +YW LA DA RD+LLA+R DEA HR+VNHT + LK D NP+++ Sbjct: 43 TSKDNEQLEGKVHDVSVQHFRRSNNPHPLFSKVDDHGNPVWVNPVDNKVWSEEEVKDVKVTHIDPKDRHDRVAYYLIRMIRRGFDIFSGYAFGPINEHKFLRRVIFLETVAGIPGMVAGSLRHLKSLRLMKRDHGWIHTLLEEAENERMHLLTFMQLREPGLLFRGMVLAAQGVFWNLYFLGYLASPRTCHRFVGYLEEEAVKTYTDAIKALDDGLMPTWTNKPAPDIAKTYWGLADDALMRDVLLAVRADEANHRDVNHTLSTLKTTDVNPYVS 317
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|298714367|emb|CBJ27424.1| (alternative oxidase isoform A [Ectocarpus siliculosus]) HSP 1 Score: 310.457 bits (794), Expect = 1.742e-99 Identity = 154/289 (53.29%), Postives = 200/289 (69.20%), Query Frame = 0 Query: 78 EKEELRDGARSIIHFKLSPNRHALNVPKLDPKEKVWENPTH-----------------HSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANL----KENDDNPF 345 E+E++R G RS +HF+ +P +H L + PK + H +W+ EEV +++ TH P + +A + LR+ FDVLAGFK E YLNR++FLETVAGIPGM AG +RHL SLRRM+RDHGWIHTLLEEAENERMHLLTF++LK+PGP+FR AV++ QGV +N FFLSYLI+PK CHR VG+IEEEAV TYT ++E++DA +LPLF+++ P +A SYWKL DA FRDL+LA+R DEA H VNHTFA++ K++ NPF Sbjct: 73 EEEKIRPGDRSQVHFRATPTKHPLGMGS--PKNSSVSSEGGGRSSGGKGKKGKEWSMPHEIWSAEEVNSIKPTHKDPEEAVDHIALRGVRALRWFFDVLAGFKTGVIDEHKYLNRVIFLETVAGIPGMVAGTLRHLTSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPVFRFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLPAPAMAKSYWKLGDDAMFRDLVLAVRADEANHCVVNHTFADMHQEFKQDAVNPF 359
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|551676261|ref|XP_005840884.1| (hypothetical protein GUITHDRAFT_63810 [Guillardia theta CCMP2712] >gi|428185051|gb|EKX53904.1| hypothetical protein GUITHDRAFT_63810 [Guillardia theta CCMP2712]) HSP 1 Score: 296.59 bits (758), Expect = 1.396e-96 Identity = 132/229 (57.64%), Postives = 173/229 (75.55%), Query Frame = 0 Query: 118 HHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFL 346 HHSVWT EEV V TH P D+ R+A++ + R+SFD +GF+F + TE ++R+ FLETVA +PGM AGM+RHL SLRRM RDHGWIHTLLEEAENERMHLLTF++LK+P FR AV+ QG+F N+FF++Y+ +P+ CHR VG++EEEAV+TYT II E+D G+L + P IA+ YW L PDA+ RDL+LA+R DEA HR+VNHTFA+L+ + NP++ Sbjct: 2 HHSVWTDEEVNGVRKTHRPMEDFVDRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETVAAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVATQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAIDYWHLRPDASMRDLMLAVRMDEANHRDVNHTFASLRRDQTNPYV 230
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|551676265|ref|XP_005840886.1| (hypothetical protein GUITHDRAFT_63923 [Guillardia theta CCMP2712] >gi|428185053|gb|EKX53906.1| hypothetical protein GUITHDRAFT_63923 [Guillardia theta CCMP2712]) HSP 1 Score: 295.819 bits (756), Expect = 2.462e-96 Identity = 133/229 (58.08%), Postives = 173/229 (75.55%), Query Frame = 0 Query: 118 HHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPFL 346 HHSVWT EEV V TH P R+A++ + R+SFD +GF+F + TE ++R+ FLETVA +PGM AGM+RHL SLRRM RDHGWIHTLLEEAENERMHLLTF++LK+P FR AV+ QG+F N+FF++Y+ +P+ CHR VG++EEEAV+TYT II E+D G+L + P IA+ YW L PDA+ RDL+LA+R DEA HR+VNHTFA+LK+N+ NP++ Sbjct: 2 HHSVWTDEEVNGVRKTHKPIEGLADRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETVAAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVATQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAIDYWHLRPDASMRDLMLAVRMDEANHRDVNHTFASLKKNEINPYV 230
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|919044639|ref|XP_013405504.1| (PREDICTED: alternative oxidase, mitochondrial-like [Lingula anatina]) HSP 1 Score: 299.286 bits (765), Expect = 2.760e-96 Identity = 133/227 (58.59%), Postives = 177/227 (77.97%), Query Frame = 0 Query: 119 HSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKENDDNPF 345 H +W++EE+ +VE+TH P ++T + A+ + LR SFD+ +GF +RK +E +L R++FLETVAG+PGM A M+RHL+SLRRMQRDHGWIHTLLEEAENERMHL+T +++++PG FR VL+ QGVF NVFFLSYLI+P CHR VG++EEEAV+TYT ++++D+G LP N PPIA YW+L PDA RD++LAIR DEA HR VNHT +LKE++ NP+ Sbjct: 109 HPIWSEEELNSVEITHRVPENFTDKAAFYSVKILRNSFDIFSGFNWRKRSEKQWLRRIIFLETVAGVPGMMAAMVRHLNSLRRMQRDHGWIHTLLEEAENERMHLMTALQIRKPGLAFRGCVLLAQGVFVNVFFLSYLISPYFCHRFVGYLEEEAVKTYTKCLQDIDSGSLPWKNSP-APPIAKDYWQLPPDAMMRDVILAIRADEAHHRVVNHTLGSLKEDEPNPY 334
BLAST of EWM30635.1 vs. NCBI_GenBank
Match: gi|955162464|emb|CUG93676.1| (alternative oxidase, putative [Bodo saltans]) HSP 1 Score: 298.13 bits (762), Expect = 4.761e-96 Identity = 137/248 (55.24%), Postives = 174/248 (70.16%), Query Frame = 0 Query: 103 VPKLDPKEKVWENPTHHSVWTKEEVENVEVTHLPPADWTSRVAYTIAQTLRFSFDVLAGFKFRKATEDMYLNRMVFLETVAGIPGMAAGMIRHLHSLRRMQRDHGWIHTLLEEAENERMHLLTFMRLKRPGPLFRAAVLVVQGVFFNVFFLSYLINPKICHRLVGHIEEEAVRTYTHIIEEMDAGQLPLFNHVIPPPIAVSYWKLAPDATFRDLLLAIRKDEATHREVNHTFANLKE----NDDNPFL 346 V ++ P+ K W NP H VW ++VE V V H P VAYT+ + R+SFD L+ ++F T +NR +FLETVAG+PGM GM+RH+ SLR ++RDHGWIHTLLEEAENERMHLLTFM++++PG FR A+L+ QG+ FN FL YL NP+ HR VG++EEEAV TYT II E+DAG+LP FN P +A +YW+L PDATFRD+ IR DEA HR VNHTFA++ E N NPF+ Sbjct: 49 VSEVRPETKTWSNPVGHPVWDVKDVEQVHVNHKPSGGVVDTVAYTLVKICRWSFDTLSLYRFGTLTTRKVINRCLFLETVAGVPGMVGGMVRHMSSLRGLKRDHGWIHTLLEEAENERMHLLTFMQIRQPGIFFRGAILLTQGIMFNALFLLYLANPRFVHRFVGYLEEEAVMTYTKIIHEIDAGKLPEFNGTQIPDVARNYWRLGPDATFRDMFNVIRADEAGHRLVNHTFADMHEQKLQNSTNPFI 296 The following BLAST results are available for this feature:
BLAST of EWM30635.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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