EWM27070.1, cds3593 (CDS) Nannochloropsis gaditana

Overview
NameEWM27070.1
Unique Namecds3593
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:788251..792426 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27070.1
Productrna polymerase-associated protein ctr9
Orig transcript idgnl|cribi|Naga_100194g15.7122.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:788251..792426 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0016593Cdc73/Paf1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0006355regulation of transcription, DNA-templated
GO:0016570histone modification
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR031101Ctr9
IPR013105TPR_2
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|585109245|gb|EWM27070.1| (rna polymerase-associated protein ctr9 [Nannochloropsis gaditana])

HSP 1 Score: 2809.25 bits (7281), Expect = 0.000e+0
Identity = 1391/1391 (100.00%), Postives = 1391/1391 (100.00%), Query Frame = 0
Query:    1 MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQETGEARKRKGEGEGPLSPKKRRVQRTRASEDSGSDEDEELFGGRESAPSMPTTQVLPPLLSPAGDAASSPAVPAGATLAEAEAAPLPPAGSVPSGASEASPAARSSGRRRVMADEEEEEESA 1391
            MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQETGEARKRKGEGEGPLSPKKRRVQRTRASEDSGSDEDEELFGGRESAPSMPTTQVLPPLLSPAGDAASSPAVPAGATLAEAEAAPLPPAGSVPSGASEASPAARSSGRRRVMADEEEEEESA
Sbjct:    1 MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQETGEARKRKGEGEGPLSPKKRRVQRTRASEDSGSDEDEELFGGRESAPSMPTTQVLPPLLSPAGDAASSPAVPAGATLAEAEAAPLPPAGSVPSGASEASPAARSSGRRRVMADEEEEEESA 1391          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|553190212|ref|XP_005855148.1| (ctr9 protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293909|gb|EKU21209.1| ctr9 protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1794.63 bits (4647), Expect = 0.000e+0
Identity = 890/890 (100.00%), Postives = 890/890 (100.00%), Query Frame = 0
Query:  380 KGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQ 1269
            KGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQ
Sbjct:    1 KGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQ 890          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|553190224|ref|XP_005855151.1| (tpr repeat nuclear phosphoprotein, partial [Nannochloropsis gaditana CCMP526] >gi|422293912|gb|EKU21212.1| tpr repeat nuclear phosphoprotein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGR 385
            MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGR
Sbjct:    1 MGTPEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGR 385          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|298705742|emb|CBJ49050.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 407.912 bits (1047), Expect = 2.019e-117
Identity = 353/1193 (29.59%), Postives = 561/1193 (47.02%), Query Frame = 0
Query:    7 DGII-IPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAEL--ADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEA--------------ERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSR----AAAVVGSGPEGLTGLQPGDH-VRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPL----NKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTD-GLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLS-----RPE-------LAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEE-----SRTRQAALVAAEMRRREEVKRAEEEERER-EKAAARQAALERDEE 1154
            DG I IP+RG+Q  + V +  E+LP     ++++ ++ +L+AE A  D+W   A  YY +G  + FR +L+ + + L       + E      +R F  G +R+ N L A + ++A K     D   R + +  A  +L  AD +   +E T + KG     L  G     AKY F NA      +   N  A LG A   FH       ++A  L  E IR +P+C A VRVG GLCCY+LG++ RA+AA  RAL L   N  A++  A  EL  A A   + +   +  +   + AY  D K+ + L  LA +Y   W P+ A  + + +GS    +      GD    L  GD+IRIG  F         +G +G +G T        H R        E+   P    L ++ KD+R+ + L   A    E+ +  E++AE+ ++KA+V H   +   A + Y +AC L P    AQYG AQML  +                +  A+ ALN VL  VP + + L LLG+L A+      D+  AL K +RA+EL P + + W+A  QV Q  P AD K AL   L+               E L  +          +N+  L    G    A   YR A    AS        +++  L     I  P N +FW W+++P  T  + EGSR    +  + G+  +G T ++ G+H V  A GP     F       +  D   GG  G L L+            P+  K  +  +  E ++ VFNLA++H+  G   AA+EL  A+  ++P++V+++++LGI+A   G   +A  W  +A ++  ++  + A  G +         AQ+ FE +       GD YA ++LGN+YF N         H+ HA  ++ +VLKKD  N ++A+GLG+VLAE+ G ++ A+ V   VRE S +   ++ IN+AH+++AQ + N AI  Y++ LKK     D  LH+    Y++HA+F  R +   +R +LKALHV P    L +N+ L  +       ++       +++E  +A  DL  A  + S     +P+       L     K ++   +   N++ A Q++  E+ +  + +E      R  +  +   +    E+ +R E   RER E+A  +QA+L++ +E
Sbjct:   13 DGCIRIPVRGAQ--QTVEVYTEELP-----SDYNDVVDVLKAEIAPLDIWLRFAVEYYRQGSEEHFRGILNEIIEALTP-----DTERFYADDRRAFDVGRIRILNALAADSVKQASK---CSDRSARDDGYTTALSHLTSADRIDNMSELTWVGKG--VFYLCQGEL-DRAKYFFENA-----RKQRHNFPATLGEAAVNFH---HGNYKQALDLYSEAIRVNPECSASVRVGLGLCCYKLGQISRAQAAMTRALQLDPQNVQALVGSAILELSTASAGSQDAVRRTENAINTISMAYHVDAKNAMVLNHLANHYFWTWSPLKA-TLSIAQGSRSGTVR-----GDLKDALVGGDIIRIGSGFATA------MGDEGFDGTT-------LHLR--------EEFTEPSGDKLKLFTKDYRKVVELASTAY---ENTSAPEIKAESCYLKARVHHATGNLSEAKLLYNEACHLWPQFPLAQYGMAQMLVNE--------------GSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKN----KDRLPALSKFKRALELNPRLSDAWIAQAQVLQEDP-ADHKLALSSYLKGLGDGGATSTGTTFPEGLSDRSGSQTRQAAWTNIAVLHEHIGNAADAMTAYRHAFSEKASGVKRTDDTVDSDALLR---ITDPANQLFWEWKELPA-TASVVEGSRTVQTSVPIRGALRKG-THVRVGEHYVTTAQGPEKDGKF-------EVADVAPGGVDG-LALQG-----------PLFKKVHKIRVTKENVSMVFNLALLHEKQGHHEAAQELHKAVLAEHPTYVNSYLRLGIMARDSGQIHEASKWFKQALEVDGENPNIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFSANGLGMVLAEK-GTLDHAKDVFARVREVSAEVLGDVWINLAHVYLAQNKHNEAIRLYQNCLKKFHGGRDPSLHI----YLAHAYFDARQYNDCMRVLLKALHVSPNNLQLWYNLALARETFAVAVLQKEQKGEARTLAEVENAIEDLKGATKLFSWLKDCKPDKTGGVRHLPYDASKAEKHAKFCFDNIERAAQHLNHEKMKADQQQEVHERHQRALEKMVQQRKQEEEEQRRRQETHAREREERAKLKQASLDKLQE 1101          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|1210531623|dbj|GAX09979.1| (RNA polymerase-associated protein CTR9 [Fistulifera solaris])

HSP 1 Score: 296.59 bits (758), Expect = 1.149e-78
Identity = 334/1222 (27.33%), Postives = 547/1222 (44.76%), Query Frame = 0
Query:    4 PEHDGIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCP---AEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELA--DAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDV-PGMTVRLEEGS--RAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDP--------------VPVAVKRSRGLLRHETLTTV-FNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDP----YAMVALGNLYFMN-SVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKK---------HRLSTDGLHVRVLEYVSHAHF----------------LERSWEKALRAILKALHVEPGKPALAFNVGLILD----ASVSESFKRSNAQRTTSVSES--RSAERDLSVAISVLSRPELAQAYPKVKRKV--DYM---KANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREE-----VKRAEEEEREREKAAARQAALERDEELR 1156
            PE + +IIPI+         L  E  PD         + Q+L+ E A  D+WA  A  +Y + +       L +L +         E+E N + ++       VR+    G     E        DE ++ +    A      A  +  +   T + +G +  N   G     AK+ F   + +     G  L A+LG+A   +      +   A+      IRR+P  P   A +R  FGL CY+LG+VDRAKAAF RAL +      AM+  A  ++A  D    +Y    +R +++ + A + D  + +    LA +Y  KW P+    V+V +GS  V+         +P  L+ G+ IRIG  F   V ++ D   +  EG T  T+ + +            DG       L  ++KD+ + +AL   A          E++AE++F  A+V H  +D ++A  +YR AC+L P L PA++G AQ       TL ++    EA   L E V + ++         D L LLGLL   Q  L     E L  LR+A+EL P   E  V      Q+     PK +L+   +A  L+ +    VP+ +L+N+G L     +   A + Y++AL +   TG     ELE   +   + I+HP N++F+ +  + P   V + +G       +V S    +  +  GDH+R        E F + V       + +   SG+L L H      P D               + + VKR   LL     TTV FN+A +H+  G   AA EL  AITK+ P++V+++++L  +A   G  K+   WL  A   +P + EV  + G +         AQ +FE L  +  P    YA +++GN+YF    V+    A H+ +A  Y+ ++L KD  N YAA+GLG VLAE+ G++  A+ +   VRE S D   + L+N+ H+++AQK+   A+  Y++++K+          +   + L V VL Y++ A+F                 +  +++A+  +  AL     K  +     L +     A+     +  N  RT    E   +  E  L +   +L + E       +K  V  D++   KAN+  A+ +++ E+K  R ++E   R+   +AAE  ++EE     +K+AEE + + E+     A +++ EELR
Sbjct:   10 PEEETLIIPIKIKD-----GLFIEMFPDEVAQTSAAVLKQVLRDEAASGDLWAASA-LFYSQNKQ--AADALAVLEEAC-------ELETNDKQER-------VRLLAACGIAHLMEN------PDEMQQQQ----ADQRFTQAGKIDTFFPMTWIGRGLL--NWGKGGA-DQAKFFFQTTLKQC----GPVLPALLGMAAVLY---GQGDYEGAQNHYATAIRRYPNHPTASAAMRTAFGLTCYQLGQVDRAKAAFTRALQIDPDCVEAMVGSAVLDMAALDETAQDYASRTERAIKLMSMANLLDHSNAMVQNHLANHYFWKWTPLPG-VVQVTQGSVIVK-------SSQPIPLDPGEPIRIGTNFEASVKEMAD-EEEDLEGST-FTMSKPWKEEST-------DG-------LKAWKKDYERVIALAKGAYKSTR---VKEIQAESLFFLARVYHAREDMDNAHKFYRKACDLYPGLNPARFGLAQ-------TLIVRKEYNEAANELQELVRSSSKA-------TDALGLLGLL---QVHLGKHLDEGLTHLRQAIELDPLNPELVVLEAMALQQHRTFYPK-SLQKYQKAVDLMNREGVPVPSHILTNMGVLCQETRKYDEALKMYKQALASLDETGEYSKAELENVGVIGGE-IRHPDNSLFFDFLSLSPETEVEVVDGDEKNVVKIVTSASTDVFVISAGDHIRLG------ELFQTKV-------ESVDNESGNLLL-HLADEYVPKDTDENDASVDVTENKRLSLKVKRENRLLDMPNATTVIFNIARLHEATGRALAAIELHKAITKRNPAYVNSYLRLACIAVDSGSLKECSEWLKIAAASSPGNSEVLTLIGNLHLSLCDWKPAQDVFEGLMGKKIPSVEAYAALSMGNIYFETLHVSEQRYAKHLQYASDYYKRILLKDPLNAYAANGLGTVLAEK-GEIFKAKEIFGRVREVSEDSIADALLNLGHIYLAQKKHPEALQMYQNYMKRIEDVATPTTSKSRVEDL-VDVLLYIAFAYFDWARHTELSNDSNAAPADGRYKQAMEYLTTALSKRAPKKEVVVQYNLCMTKLQAANCVLQKQIRNIPRTVEEVEEALKGLEESLVIVEGILKQKEEGTQKINIKTSVLEDFLKHCKANIGSAQSHLEDEKK--RAEDEVAEREIRRLAAEAAQKEEQIKLAIKKAEEAKLQEERDMKAAAKMQKMEELR 1125          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|219109906|ref|XP_002176706.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411241|gb|EEC51169.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 278.87 bits (712), Expect = 7.829e-73
Identity = 356/1399 (25.45%), Postives = 588/1399 (42.03%), Query Frame = 0
Query:   11 IPIRGS---------QRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRR-----GLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMA---MNLSAGSTWKH--AKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCP-AEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELA--DAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTG--LQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGDLCLKHTFFLATPPDPV-------PVAVKRSRGLLRH-ETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEG----DPYAMVALGNLYFMNSVTVPDKAH--HMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLH-----------VRVLEYVSHAHF-LERSWEKA-----------LRAILKALHVEPGKPA-----LAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSR--------PELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDE-ESRTRQAALVAAEMRRREEVKRA--EEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDEDYGMRGVEPGQGQGGGEE--AGGKGVLGPEGKGEGGKGEGGGQETGEARKRKGEGEGPLSPKKRRVQRTRASEDSGSDEDEELFGGRESAPSMPTTQVLPPLLS 1330
            IPIR S           A  + +  E++ D   S     +L +L+ E A    WAD    Y  + +    R+ L +L +             + +  K E  R     G+  + +   A AT        + +  +R  + D A+   D   T     +P      W+    +NL  G   KH  A + F   + +     G  L A+LG A  +F      +   A+   G+ +R++P    A  RVGFGL  Y LG+VDRAKAAF+RA  +   N  AM+  A  ++A  D    +Y   ++  +R+ + A + + ++ +    LA +Y  KW PV    V V +GS+ V++ +      +   LE G+ IRIG  F   V DV D          ++T D    G                   L +++KD+ + +AL   A           ++AE++F  A+V H   + + AL +Y  AC+L P+L PA++G AQ       TL +K+    A  +L + +A  +   D +          G  +           E L  LR+A EL P   +  V      Q+    + K +L    +A  L+ ++   V   + +N G L H       A + YRRAL      G  G    +    P    I+H  NA+F  + +   +   L+  S+    V    E      L  GD  R +LG G    F + VV  ++ D       G + L+    LA   DP+       P+ V R   LL   E +T  FN+A +H+  G   AA E+  AI K+ P++V+++++L  +A   G  K+   WL  A   AP + EV  + G +         AQ +F+ L  +     D YA ++LGN+YF N     DK +  H+ +A  Y+ ++L KD  N YAA+G+G VLAE+  ++  A+ V   VRE SGD   + L+N+ H+F+AQK+   A+  Y +++K+   + DG             V VL Y++ A F   R  E A            R  ++ L++  GK +     L +N+ +    + +   ++       SV E   A R L  +  ++ +         ++  +   ++  V + KAN+  A+ +++ E KR +E E E   R+ A   A ++ R  + +A  +  + + EK    +A +++ EEL+     W +E +E  +  K++ AR            G   E    E+ GL        A++     +DS DD +         +G GG E+  +  K + G     + G  E              + +G + P   +   T       SDED+       + P+   ++  PP  S
Sbjct:   27 IPIRSSIQFPDNDSLHHARFIEIFPEEMRDTPVST----LLHVLKDESAELSTWADAGWHYMVQKKN---RESLTILEEACDTTAATTTTTPSNDVDKTERVRILAATGIAHLSSNGAADAT--------SGNTAKRSNVLDEARQQADQKFTQAGKIDP-FFPMTWIGRGMLNLWQG---KHDQATFFFQTTLKQC----GPVLPALLGTAAVSF---AQGDYTAAQTAYGQALRKYPHASGAASRVGFGLASYALGQVDRAKAAFRRATAIDPENVEAMVGTAILDMASVDVSDKDYAAKMEEAIRVMSMANLLNHENAMVQNHLANHYFWKWTPVNG-TVEVTKGSQLVQMPS------QAVPLEPGERIRIGTKFETTVQDVEDDSNNNTASTFTVT-DSWSEGSATG---------------LKVWKKDYDRVIALAKGAYGSTN---VQSMQAESLFFLARVYHVRGETDHALKFYEKACKLAPALTPARFGLAQ-------TLIVKEDYSAAKKQLQQVLATASNATDALALLGLLEARSGKQV----------EEGLMHLRKATELDPLNTDLVVLEAMALQKYENNNVK-SLERYKKALLLMERKTTKVSYEIYANCGVLCHELKRHDEALDMYRRALAVLDEDGFKGAAVFQLADGPERGRIRHVDNAMFNAFVNSNLLVEVLDRHSKTFVKVLDVLEADVAGILSKGD--RVSLGDG----FETKVVSWESRD-------GAIVLE----LADEYDPMDTDSKKAPLLVVRENNLLSIPEAITVAFNIARLHEATGRTVAAIEIHKAILKRNPAYVNSYLRLACIAVDCGSLKEGSEWLKIAASTAPGNPEVLTLVGNLHLSLCDWAPAQSVFDGLLSKKIPNVDAYASLSLGNIYFANLHVNEDKRYDKHLQYAADYYRRILAKDPANAYAANGIGTVLAEK-AEIFKAKEVFNRVREVSGDSIPDALLNLGHIFLAQKKHPEALQMYTNYMKR---TEDGTTPTTAKSRVDDVVSVLLYIAFAFFDWARHTELANDSSAAPADGRYREAMQHLNLAIGKGSKQDLVLKYNLCMTKLQAANCVLQKLTRNIPRSVEEVEEALRGLEESFQIVEQIVKDKADGKKVNISSTTLQDFVKHCKANILSAQSHLEDERKRAKEAEVEREIRRLAAEEATIKERLRMDQAAMDAHKLQEEKDQKAEAKMKQVEELQS---NWREE-KETKQSEKEKRAR------------GRKDEMTADEV-GLVVEDDNHQATNGHGLFDDSDDDSEIVDSLPNETKGIGGLEKSTSSTKDLFGDSDDDQSGNDE--------------DRKGTVKPDATKAAITSMDLFGDSDEDDIEVAYGATKPTSEESKKEPPATS 1303          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|397645623|gb|EJK76918.1| (hypothetical protein THAOC_01291 [Thalassiosira oceanica])

HSP 1 Score: 261.151 bits (666), Expect = 3.434e-67
Identity = 259/940 (27.55%), Postives = 429/940 (45.64%), Query Frame = 0
Query:  126 RAEDEE---RRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHP-QCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEP-----DEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHKWFPVGAQAVRVVEGSEKVELEAARGAGDRPHRLERGDLIRIGPVFTCRVLDVVDVGGKGAEGRTSLTLDR-AFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYY-------RDACELCPSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLHVKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQP----IQHPRNAVFWRWEDVPGMTVRLEEGSRAAAVVGSGPEGLTG------LQPGDHVRFALGPGPREAFVSVVVDEKAEDD--MMGGASGDLCLK-HTFFLATPPDPVPVAVKRSRGLLRHETLTTV-FNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDP----YAMVALGNLYFMNSVTVPDKAH-HMGHARVYHTKVLKKDARNLYAAHGLGLVLAE--EFGKVED--------------------ARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHR--------LSTDGLHVRVLEYVSHAHF 999
            +AE+E+   RR E+  +A      AD++ Q    T + KG + +   A   +  AK+ F+N       + G+ L A++G+A   +      + + A+ L  + + + P Q  A VRVGFG+ CYRL E+DRAKAAF+RA  +   N  A++ LA  E+A  +      +EY      V++M + A + D  +      LA +Y  KW PV    V V  GS  V         +    LE GD IRIG      V   VD   + A+G T    D   F  +                  L I++KD+ + ++L   A +      P  ++AE++++ A+V H   +   A I         RD  E+       + G    LAA    + L D K     +  +A  +L + +D+ P + D L L+  L  +QH+   D   +LD+ R AV                                    RL+  +   + A +L+N+G L H   +   A E Y +AL+A  S     +G+      P E      ++H  N++FW+++++ G+ V++++  +   +    P  L        ++ GD +  +LG G      S V D    DD  +      D+ LK H  ++        V+VKRS G +++ ++ ++ FNLA +H+  G +  A EL  AI KQ+PS+V+++++L  +A   G  K    WL  A  +AP + EV  + G +         AQ++F+ L ++  P    Y+M++LGN+YF N++  P K + H+ HA  ++ ++L+KD  N YAA+GLG VLAE  E  KV                      A+ +   VRE SGD   + L+N+ H+++AQK+   A+  Y++++ + R         S +     VL Y++ A+F
Sbjct:  209 KAEEEQARVRREELQGIADARFVKADSINQVNPQTWIAKGMLNL---AQKKFDQAKFFFDNLTMR---QEGEILPALIGMAAVKY---LEKDYKGAQDLYAKAMEKFPVQSGAAVRVGFGVACYRLNEIDRAKAAFRRAHDMDPDNVEALMGLAILEMASLDSHALDANEYRAKAGSVIQMISQANLVDHTNASVQNHLANHYFWKWSPVPGM-VSVECGSNIV------TGSNVASSLEAGDRIRIGKELETLV--AVDDEDEMADGETFKIKDTWKFDSKS----------------NLKIWKKDYERVISLAKAAYSSTN--IPG-IQAESLYMLARVFHARGEMTEAHIDLGRQIRRRRDFAEVVIRYLHNRNGR---LAA----MGLLDAK---AGKRADAFTSLRKAIDLDPFNAD-LVLIEALALQQHE--TDYPASLDRYRNAV------------------------------------RLLEAQGRSISADVLTNMGVLCHETKQYEEALEMYTKALDAIESENPESVGK------PDETCDSTFVRHEENSLFWKYQEI-GIRVKIDDKDKKLLI---APSDLVEECADLLIKVGDDI--SLGEG----VFSTVTDVTEGDDEALHIKVKDDVELKSHQTYV--------VSVKRSNGRIQNPSVVSIAFNLARLHETSGRIVPAVELHKAILKQHPSYVNSYLRLACIARDCGSLKDCSEWLKNAVAVAPGNPEVLTLVGNLHLSLCDWAPAQKVFDQLLQQKVPKVEAYSMLSLGNIYF-NNLNTPKKYNKHLHHAADFYRRILQKDTANAYAANGLGTVLAEKGELLKVISTFLLDRSFQLWRPANFLHVKAKEIFNRVREVSGDTLSDALLNLGHIYLAQKKHPEALQMYQNYMGRCRRSGAQTTSKSQEDDEAEVLLYIAFAYF 1037          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|156364414|ref|XP_001626343.1| (predicted protein [Nematostella vectensis] >gi|156213216|gb|EDO34243.1| predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 164.466 bits (415), Expect = 2.629e-37
Identity = 131/425 (30.82%), Postives = 213/425 (50.12%), Query Frame = 0
Query:  770 TLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKE----GDPYAMVALGNLYFMNSVTVP--DKA---HHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQ-AYPKVKRKVDYMKANLQLARQYVQAEEKRFRED-------EESRTRQAALVAAEMRRREEVKR------AEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPR 1171
            ++TT +NLA +H+ M E+  AE+L   I +++P++V  +++LG +A  +G   +A  W   A Q+     +  ++ G +          Q+ FE + K+     D Y+++ALGN++ + ++  P  DKA    H   A   + +VL+ D+RNLYAA+G+G +LA + G + +AR V   VRE + D PD + +N+AH++V QKQ  +AI  YE+ L+K         V V+ Y++ A++     +   R +LKA HV P    L FNV L+              Q+  +    R+ +  L V +  +   E AQ  +  + R  D MK +L  A     A E R   D         SR R+      E+RR++E ++       EEEER R+K        ER+E+  RL L+  Q+  EA +
Sbjct:  495 SVTTTYNLARLHEAMCEIDKAEQLYKNILREHPNYVDCYLRLGCMARNRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTANDAYSLLALGNVW-LQTLHAPTRDKAKERRHQDRALAMYKQVLRNDSRNLYAANGIGCILAHK-GYIREARDVFSQVREATADVPD-VWLNLAHIYVEQKQYVSAIQMYENCLRKF---FKHHSVEVMLYLARAYYRAGKLKDCKRVLLKARHVSPNDTILLFNVSLV--------------QQKLATGILRAEKSSLKVVLGAVGELEQAQRNFTWLSRHGDRMKFDLAWA-----AYESRHTSDLLSQAQYHVSRARKLDEQEQELRRKQEAEKEALRRSKEEEERSRQK--------EREEQ-ERLMLEKRQQFVEATK 885          

HSP 2 Score: 97.0561 bits (240), Expect = 1.838e-16
Identity = 90/340 (26.47%), Postives = 160/340 (47.06%), Query Frame = 0
Query:    8 GIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLR-DGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHK--WFPVGAQAVRVVEGSEKVELEA 344
             I IP+R +   E + L  + LPD  +      +L IL+ E    ++W  +A  YY +G+ + F ++L   R D  ++ G  E              +  +   + L A   Q+A   ++ +++E++ E++  A     +AD ++ Y +  LL + +    L  G   + A   FN  + ++    G N+ A+LG A   F+     + + A     + +R +P CP  VR+G G C  +L ++D+A+ AFKRAL L      AM+ LA  EL   +P    D++   V++ + AY  D  +P+ L  LA ++  K  +  V   A+    G+E   ++A
Sbjct:    4 SIEIPLRDTD--EVIELQFDQLPDGEE------LLSILKQEDVRLNIWNTLALQYYKQGKTEDFIRILESARTDANRKYGDSE--------------KDQMVCLDTLAAFYVQQA---RKEKNKEKKKELFTQATSLYTMADKIIMYDQNHLLGRAYFC--LLEGDKMEQADAQFNFVLAQS----GNNIPALLGKACIFFN---KRDYKNALAFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELEPRCTGAMVGLAILELNSKKP----DSIKIGVQLLSKAYTIDNSNPMVLNHLANHFFFKKDYSKVQHLALHAFHGTEVEAMQA 305          

HSP 3 Score: 65.855 bits (159), Expect = 5.942e-7
Identity = 65/247 (26.32%), Postives = 107/247 (43.32%), Query Frame = 0
Query:  396 GRGLAPEAVQEDGHAP----HFPTLSIYRKDFRQAMALVDRALARPEDLAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELC-PSLAPAQYGHAQMLAAQSRTLALKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRAVELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEV-VPAPLLSNVGALLHVKGEQGGAREYYRRALE 636
            G  L  +A   D   P    H      ++KD+ +   L   A    E  A   ++AE+ +  A+  H   DF+ A  YY  A +   P+     +G  QM  A         R++     L  A     +VL  +P + +T+ +LG L +    L   +  A   L++  E  PD  E W+ L  + +++   D + AL+    A RL+ ++ E  VP  +L+NVGAL    G    A+ +Y  +L+
Sbjct:  253 GVQLLSKAYTIDNSNPMVLNHLANHFFFKKDYSKVQHLALHAFHGTEVEA---MQAESCYQLARAFHVQGDFDQAFQYYYQATQFASPNFILPHFGLGQMYIA---------RRD-----LNNASQCFEKVLKAMPGNYETMKILGSLYSPSSDLVK-RELARQHLKKVTEQHPDDVEAWIELAGILEQS---DVQAALQAYGTASRLLKEKVEADVPPEILNNVGALHFRLGNLKEAKRFYESSLD 478          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|637246018|ref|XP_008105031.1| (PREDICTED: RNA polymerase-associated protein CTR9 homolog [Anolis carolinensis])

HSP 1 Score: 162.155 bits (409), Expect = 1.983e-36
Identity = 142/470 (30.21%), Postives = 231/470 (49.15%), Query Frame = 0
Query:  770 TLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNK----EGDPYAMVALGNLYFMNSVTVPDK-----AHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQR-TTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKV-DYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDE 1228
            ++TT +NLA +++ M E   AE+L   I +++P++V  +++LG +A  +G+  +A  W   A Q+     +  ++ G +          Q+ FE + K    + D Y+M+ALGN++ + ++  P +       H   A   + +VL+ D +NLYAA+G+G VLA + G   +AR V   VRE + D  D + +N+AH++V QKQ  +A+  YE+ L+K     +     VL Y++ A F     ++  + +LKA HV P    L FNV L+L             QR  TSV +   +  +L   ++ +   ELA  Y     KV D M+ +L LA     A E R   D  S   QA    A  R+++E +R    ++E+EK   RQ  L+  EE R   L+  +E ++      + + +    ++  GE EG        E +  G GR+ R     EE  ND SDD+
Sbjct:  496 SVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVW-LQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK-GYFREARDVFAQVREATADISD-VWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQN---TEVLLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVL-------------QRLATSVLKDEKS--NLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALA-----ATEARQCSDLLS---QAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKR---LREIEEQKKLLEQRAQYVEKTKNILMFTGEVEG------SKEKKRGGAGRRSRKTGEFEEFVNDDSDDD 927          

HSP 2 Score: 93.2041 bits (230), Expect = 2.497e-15
Identity = 84/315 (26.67%), Postives = 150/315 (47.62%), Query Frame = 0
Query:    8 GIIIPIRGSQRAECVHLLAEDLPDVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGRPDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEAIKFKRAEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAITEANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYRLGEVDRAKAAFKRALVLSRGNRFAMLALARAELADAEPDEYLDTLDRVVRMQTAAYVQDEKDPLALVSLATYYLHK 322
             I IP+R +   E + L  + LP      E D ++ IL+ E     +W  +A  YY +G+ + F ++L   R           ++GN +   R+  +  +   + L A   Q+A   ++ ++++ + E+   A     +AD ++ Y +  LL  G     L  G     A   F+  + ++ N    N+ A+LG A  +F+     + R A     + +R +P CPAEVR+G G C  +L ++++A+ AF RAL L+     A++ LA  EL + E     D++   V++ + AY  D  +P+ L  LA ++  K
Sbjct:    5 SIEIPLRDTD--EVIELDFDQLP------EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLEAAR-----------IDGNLDY--RDHEKDQMTCLDTLAAYYVQQA---RKEKNKDNKKELITQATLLYTMADKIIMYDQNHLL--GRACFCLLEGDKMDQADAQFHFVLNQSPN----NIPALLGKACISFN---KKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEA----DSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFK 282          
BLAST of EWM27070.1 vs. NCBI_GenBank
Match: gi|927122512|ref|XP_013907153.1| (PREDICTED: RNA polymerase-associated protein CTR9 homolog [Thamnophis sirtalis])

HSP 1 Score: 160.614 bits (405), Expect = 4.773e-36
Identity = 146/502 (29.08%), Postives = 244/502 (48.61%), Query Frame = 0
Query:  738 GDLCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNK----EGDPYAMVALGNLYFMNSVTVPDK-----AHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQR-TTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKV-DYMKANLQLARQYVQAEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLTLQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEESSNDSSDDE 1228
            G+L     +FLA+  D      +         ++TT +NLA +++ M E   AE+L   I +++P++V  +++LG +A  +G+  +A  W   A Q+     +  ++ G +          Q+ FE + K    + D Y+M+ALGN++ + ++  P +       H   A   + +VL+ D +NLYAA+G+G VLA + G   +AR V   VRE + D  D + +N+AH++V QKQ  +A+  YE+ L+K     +     VL Y++ A F     ++  + +LKA HV P    L FNV L+L             QR  TSV +   +  +L   ++ +   ELA  Y     KV D M+ +L LA     A E R   D  S   QA    A  R+++E +R    ++E+EK   RQ  L+  EE R   L+  +E ++      + + +    ++  GE EG     ++ + +G G GR+ R     +E  ND SD++
Sbjct:  346 GNLGEAKKYFLASL-DRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVW-LQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK-GYFREARDVFAQVREATADISD-VWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQN---TEVLLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVL-------------QRLATSVLKDEKS--NLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALA-----ATEARQCSDLLS---QAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKR---LREIEEQKKLLEQRAQYVEKTKNILMFTGEVEG-----SKEKKRGSGAGRRSRKTGEFDEFVNDDSDED 809          
The following BLAST results are available for this feature:
BLAST of EWM27070.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109245|gb|EWM27070.1|0.000e+0100.00rna polymerase-associated protein ctr9 [Nannochlor... [more]
gi|553190212|ref|XP_005855148.1|0.000e+0100.00ctr9 protein, partial [Nannochloropsis gaditana CC... [more]
gi|553190224|ref|XP_005855151.1|0.000e+0100.00tpr repeat nuclear phosphoprotein, partial [Nannoc... [more]
gi|298705742|emb|CBJ49050.1|2.019e-11729.59conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210531623|dbj|GAX09979.1|1.149e-7827.33RNA polymerase-associated protein CTR9 [Fistulifer... [more]
gi|219109906|ref|XP_002176706.1|7.829e-7325.45predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397645623|gb|EJK76918.1|3.434e-6727.55hypothetical protein THAOC_01291 [Thalassiosira oc... [more]
gi|156364414|ref|XP_001626343.1|2.629e-3730.82predicted protein [Nematostella vectensis] >gi|156... [more]
gi|637246018|ref|XP_008105031.1|1.983e-3630.21PREDICTED: RNA polymerase-associated protein CTR9 ... [more]
gi|927122512|ref|XP_013907153.1|4.773e-3629.08PREDICTED: RNA polymerase-associated protein CTR9 ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3602rna3602Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications