EWM27116.1, cds3585 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|585109293|gb|EWM27116.1| (Protein of unknown function DUF760 [Nannochloropsis gaditana]) HSP 1 Score: 1045.8 bits (2703), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0
Query: 1 MTLSTNPVKRRRRLTVGLSIALVGCWWRLPEAQAFLAASRCPSGAPMGVTGGRPSRGRVTKTFARNLSGGLDPPFHFGDNGDGKNGDEDGRQPSKPSQSFQQQHQQRRQQQPRQEEPASSLRPPSASGGTKSGNASGPLKLEGFMEGSQKLVPQTGGMPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELERAWNYGQPATPSLMRPPSPSSPSTRPRGRRPPPPPPPPRGSRGRGGDRPPRGGPAGPPGGGGEGGGGWGGRSGGDPGGRGGGRSGRGGGGRRW 525
MTLSTNPVKRRRRLTVGLSIALVGCWWRLPEAQAFLAASRCPSGAPMGVTGGRPSRGRVTKTFARNLSGGLDPPFHFGDNGDGKNGDEDGRQPSKPSQSFQQQHQQRRQQQPRQEEPASSLRPPSASGGTKSGNASGPLKLEGFMEGSQKLVPQTGGMPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELERAWNYGQPATPSLMRPPSPSSPSTRPRGRRPPPPPPPPRGSRGRGGDRPPRGGPAGPPGGGGEGGGGWGGRSGGDPGGRGGGRSGRGGGGRRW
Sbjct: 1 MTLSTNPVKRRRRLTVGLSIALVGCWWRLPEAQAFLAASRCPSGAPMGVTGGRPSRGRVTKTFARNLSGGLDPPFHFGDNGDGKNGDEDGRQPSKPSQSFQQQHQQRRQQQPRQEEPASSLRPPSASGGTKSGNASGPLKLEGFMEGSQKLVPQTGGMPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELERAWNYGQPATPSLMRPPSPSSPSTRPRGRRPPPPPPPPRGSRGRGGDRPPRGGPAGPPGGGGEGGGGWGGRSGGDPGGRGGGRSGRGGGGRRW 525
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|676394227|ref|XP_009040391.1| (hypothetical protein AURANDRAFT_70357 [Aureococcus anophagefferens] >gi|323448941|gb|EGB04833.1| hypothetical protein AURANDRAFT_70357 [Aureococcus anophagefferens]) HSP 1 Score: 131.339 bits (329), Expect = 1.789e-30 Identity = 91/269 (33.83%), Postives = 138/269 (51.30%), Query Frame = 0
Query: 164 NNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
N Y ++ +L+P+++I F A APPRVQ+AV++T++ +G+ +E + T A+L+++ Q+TGYM NAE +V + LA P+LPP G+ EE A + + GTVTV VRVDA Y+ LR E A+L+ EL +E E+R +DLLAYI L +Q +T +T DV++ MK L ++ + + ++ +A+AQL MW LV GY+LRELE
Sbjct: 85 NRYYKIVASLAPSDIIGRFAATAPPRVQDAVKQTIMGLLGNAGGFALETATITTSEKLANLMFQLQMTGYMFKNAEYRVS--LSQSLA-DVPALPP--------------GDLEEDAP------------------DASAPPPVQGTVTVKLG-VEEVRVDADAYMAELRDEVATLRRELDEVEEERRLASQKDLLAYIRALPEQQMASMTSEITDDVLDGMKKLVYSIMKGMGTSNVEANTLLQQSGSAMAQLCMWQLVIGYNLRELE 317
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|551676735|ref|XP_005841121.1| (hypothetical protein GUITHDRAFT_150165 [Guillardia theta CCMP2712] >gi|428185288|gb|EKX54141.1| hypothetical protein GUITHDRAFT_150165 [Guillardia theta CCMP2712]) HSP 1 Score: 126.331 bits (316), Expect = 1.781e-28 Identity = 84/274 (30.66%), Postives = 136/274 (49.64%), Query Frame = 0
Query: 164 NNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVED-SHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDS----TALAQLIMWGLVTGYSLRELE 432
N YV++L ++SP EM+ F A A PRVQ AV+ T++ +GS+R S D S T A L+++ ++TGYM NAE ++ + + L A PS+ +++ PS + G +TVT DG + VDA YV L +E LK EL+ ++ + +D+L ++ L ++ LT ++ +V++AM+ L V+ + P + E +E+ + + LAQL MW LV GY+LRE+E
Sbjct: 110 NPYVEMLESISPGEMVGQFMATASPRVQTAVKNTIMGLLGSLRASPAFDASIVTTQRAMASLMFQLEMTGYMFRNAEYRL-SLQKSLLEALPPSIEEEKTPSPS----------------------------------------VKGKITVTMPDGKEIEVDANAYVSELSREVKQLKSELLSLQKQNDMDEVQDILGFVQRLDNKEMQSLTSSVSPEVLDAMRKLVDTVIKGMGADPSLMNEGIEIITEVPASTLAQLCMWQLVVGYNLREME 342
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|298710220|emb|CBJ26295.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 118.627 bits (296), Expect = 9.613e-26 Identity = 86/269 (31.97%), Postives = 142/269 (52.79%), Query Frame = 0
Query: 164 NNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
N Y D++ LSPTE+I F + P+VQEAVR TVL +GS+ E + TG A+L+++ Q+TGYM NAE ++ + + + ASA +LP +S V E EDE + +E G L+ + + T + VDA Y+ LR + L+ +L+ ++ ++ + + +DLL YI + Q LT G++ DV+E+M++L V+ + ++ I+ + + +AQL MW LV G++LRE+E
Sbjct: 99 NPYYDVVRRLSPTELIGRFMKTSSPKVQEAVRTTVLGLLGSLPRHAFETTAIATGDALANLMFQLQMTGYMFKNAEYRLS--LQSSMRASA-ALPAGKS------IVGEEEEDESLSTSRVEMDDD----GNLIIARPKISGKIKLTYDENKETERAMEVDADAYMAELRGQVEQLESQLLMVQTQKEEAVQQDLLVYIKSMPEHQLQGLTAGVSPDVLESMRLLVETVMGGMGDREILSKTLTQQTGSGMAQLCMWQLVVGFNLREME 354
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|1210531122|dbj|GAX10223.1| (hypothetical protein FisN_3Lh420 [Fistulifera solaris]) HSP 1 Score: 119.398 bits (298), Expect = 1.738e-25 Identity = 92/296 (31.08%), Postives = 140/296 (47.30%), Query Frame = 0
Query: 144 FMEGSQKLVPQTGGMPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKV-------QGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
+ G +L+P T + N Y+ ++ LSP+E+IS F + PPRVQ AV+ T+L IG + + + +G A L+++ Q+TGYM NAE K+ G G L +E+A P++G+ + K VR L+ +V ++ G + VDA+ Y+ LR E L+ EL + + + +DLL YI L ++ LT M+ DV+ AMK L + VL I + I T E A+AQL +W L GY+LR LE
Sbjct: 131 LLRGQGELLPGTPSQKQLENNPYMAVVTNLSPSELISKFTSTTPPRVQNAVKSTILGLIGGLPKMAFDTTTITSGQRLASLMFQLQMTGYMFKNAEYKLSLSQAIDDGDKGKFLLNGI--------ENDNEEASPLQGKVRGKLRV-----KYVRKEN------------LEASVVDDSTGG--IEVDAEAYMSELRSEVERLRDELTIARKTKEETIRKDLLLYIRTLPEKELRSLTSTMSEDVLIAMKGLVNAVLSGIGDGQIGPTTITEQSGEAMAQLCLWQLAIGYNLRSLE 399
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|219110537|ref|XP_002177020.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411555|gb|EEC51483.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.398 bits (298), Expect = 1.903e-25 Identity = 97/275 (35.27%), Postives = 134/275 (48.73%), Query Frame = 0
Query: 161 MSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLD---GTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
++ N YV + L+P+E+IS F + A PRVQ AVR+TVL IG + E + TG A L+++ Q+TGYM NAE ++ + L S+ P S AV EG D++ ++ K G + G LD V S+G ++ VDA Y+ LR E + L+ EL + L +DLL YI L ++ LT M DV+ AMK L V+ I E I E S A+AQL MW L GY+LR LE
Sbjct: 153 LAKNPYVAAVSRLTPSELISKFTSTAHPRVQNAVRQTVLGLIGGLPKMAFETTTITTGQRLASLMFQLQMTGYMFKNAEYRLS--LQQSLGLDGHSVNPSTERLLS--AVDDEGSDDDNDDTQMDTLKGKIRGKLRIRYPGSMKNTLDDPENQNDVDNSNGLQMEVDAAAYMSELRSEVSQLRDELKITRSAKEDALRKDLLLYIRTLPEKELRSLTNTMGPDVLVAMKGLVKAVMTGIGEDEIGPETVTEQSSEAMAQLCMWQLAIGYNLRTLE 423
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|1210518826|dbj|GAX22372.1| (hypothetical protein FisN_3Hh420 [Fistulifera solaris]) HSP 1 Score: 118.242 bits (295), Expect = 4.188e-25 Identity = 91/296 (30.74%), Postives = 140/296 (47.30%), Query Frame = 0
Query: 144 FMEGSQKLVPQTGGMPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKV-------QGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
+ G +L+P T + N Y+ ++ LSP+E+IS F + PPRVQ AV+ T+L IG + + + +G A L+++ Q+TGYM NAE K+ G G L +E+A P++G+ + K VR + + +V ++ G + VDA+ Y+ LR E L+ EL + + + +DLL YI L ++ LT M+ DV+ AMK L + VL I + I T E A+AQL +W L GY+LR LE
Sbjct: 131 LLRGQGELLPGTPTQKQLENNPYMAVVTNLSPSELISKFTSTTPPRVQNAVKSTILGLIGGLPKMAFDTTTITSGQRLASLMFQLQMTGYMFKNAEYKLSLSQAIDDGDKGKFLLNGV--------ENDNEEANPLQGKVRGKLRV-----KYVRKENS------------EASVVDDSTGG--IEVDAEAYMSELRSEVEKLRDELTVARKTKEETIRKDLLLYIRTLPEKELRSLTSTMSEDVLVAMKGLVNAVLSGIGDGQIGPTTITEQSGEAMAQLCLWQLAIGYNLRSLE 399
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|223999129|ref|XP_002289237.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974445|gb|EED92774.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 116.316 bits (290), Expect = 1.473e-24 Identity = 93/284 (32.75%), Postives = 137/284 (48.24%), Query Frame = 0
Query: 164 NNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGAL--LGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQE-------------QPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
N Y++++ L+P+++I+ F A A PRVQ+AVR T+L IG + E TG A L+ + Q+TGYM NAE ++ G S L + + + V+G+ VR GG + T A T T +S G + VDAQ Y+ LR + + L+ EL + + + + +DLL YI L ++ ELT M+ +V+EAMK L + VL I + I+ E ALAQL MW LV G++LRELE
Sbjct: 109 NPYLNVVSRLTPSDLIARFTATASPRVQDAVRTTILGLIGGLPQMAFETKTIATGERLASLMMQLQLTGYMFKNAEYRLSLSQSLG---SNSLLLGGDTDKEWREGKRVKGK------------IRVRYGGDMNSTNSSSSTAAITQDTETAVSSPGMEIEVDAQSYMSELRTQVSRLREELDASKQAREEEIRKDLLLYIRTLPEKELKELTGTMSPEVLEAMKGLVTAVLAGISDDGDAGTSVPGVSGNKIMPDTVTEQSGEALAQLCMWQLVVGFNLRELE 377
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|1072224536|gb|OEU09286.1| (hypothetical protein FRACYDRAFT_195450 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 112.079 bits (279), Expect = 9.795e-23 Identity = 86/285 (30.18%), Postives = 136/285 (47.72%), Query Frame = 0
Query: 161 MSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGAL-------------LGGEGETDAWLDGTVTVTTSDGTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETESMEVDSTALAQLIMWGLVTGYSLRELE 432
++ N Y+ ++ +SP+++I+ F A + PRVQEAVR T+L IGS+ E + TG A L+++ Q+TGYM NAE ++ G+ S SE+ + ++ +D+ ++ +R G + E + A + G + VDA Y+ LR E + L+ +L + + + L +DLL YI L ++ LT M++DV+ MK L VL I + I E A+AQL MW L GY+LRELE
Sbjct: 183 LAKNPYMQVVSKISPSDLIAKFTAESDPRVQEAVRTTILGLIGSLPKLAFETTSITTGQRLASLMFQLQMTGYMFKNAEYRLSMSQSLGMTQDISS---NLLLSGSEKEL-LDKDDDPLVSGKIKGKLKIRYGKKKDDKDKATPTKPTNVADENDKVASSTSSSETAEDGGMEIEVDAAAYMSELRAEVSKLRDDLEETKETKDEALRKDLLLYIRTLPGQELKSLTNTMSQDVLVCMKGLVQAVLAGIGDGKIGPDTVTEQSGEAMAQLCMWQLAVGYNLRELE 463
BLAST of EWM27116.1 vs. NCBI_GenBank
Match: gi|397618086|gb|EJK64749.1| (hypothetical protein THAOC_14485, partial [Thalassiosira oceanica]) HSP 1 Score: 110.153 bits (274), Expect = 4.516e-22 Identity = 130/454 (28.63%), Postives = 178/454 (39.21%), Query Frame = 0
Query: 16 VGLSIALVGCWWRLPEAQAFLAASRCPSGAPMGVTGGRPSRGRVTKTFARNLSGGLDPPFHFGDNGDGKNGDEDGRQPSKPSQSFQQQHQQRRQQQPRQEEPASSLRPPSASGGTKSGNASGPLKLEGFMEGSQKLVPQTGG---------MPYMSGNNYVDLLVTLSPTEMISNFKAAAPPRVQEAVRRTVLRCIGSIRDSLVEDSHRCTGLIFAHLLYKAQVTGYMLFNAEVKVQGIVGTGLAASAPSLPPQQSHRPSEQAVPVEGEDEEGAKHLLEDGKSVRLGGALLGGEGETDAWLDGTVTVTTSD---------GTRVRVDAQDYVQALRQEAASLKGELVRMEGEQRQVLARDLLAYISDLSARQSGELTEGMTRDVVEAMKVLTSRVLVSIQEQPIVETE-------------------SMEVDSTALAQLIMWGLVTGYSLRELE 432
V L+IA+V Q+F R G PSR V KT+ HF G G+NG D P + + + +Q R+ +SL P + G GP++ +V T M M+ N Y+D++ L+P ++I+ F A A PRVQ+AVR TVL IG + E TG A TGYM NAE + L QS +E +P D D K+ R G +G+ DG ++VT G V VDAQ Y+ L E A L+ EL + + + +DLL YI L ++ +LT M+ +V+ AMK L + VL I ET E ALAQL MW LV G++LRELE
Sbjct: 5 VALAIAVVAS-----TTQSFTIRHR----------GAFPSRSFV-KTYR-----------HFSSIG-GENGGTDDNNEENPLNEWFGRKEDDESRQSRERFSETSL--PMSYYGAMDEETYGPIENNDNTLDEDAVVGTTATSTEGSNSSEMMSMNRNPYLDVVSKLAPADVIARFTATASPRVQDAVRTTVLGLIGGLPQMAFETKTIATGERLAR-------TGYMFKNAEYR---------------LSLNQSLGGAENLLPGTASDS--------DSKAWRDGKP----KGKIKVKFDGGISVTDDKENEDSGLTGGLEVEVDAQAYMSELTGEVARLRDELYATRQSKEEQIRQDLLLYIRTLPQQELRDLTSTMSPEVLAAMKGLITAVLAGIGGDNRDETSWASTADGGAANGIGVGPETVTEQSGEALAQLCMWQLVVGFNLRELE 394 The following BLAST results are available for this feature:
BLAST of EWM27116.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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