EWM27100.1, cds3569 (CDS) Nannochloropsis gaditana

Overview
NameEWM27100.1
Unique Namecds3569
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:744403..744490 -
Alignment locationCM002461.1:744236..744294 -
Alignment locationCM002461.1:743604..743978 -
Alignment locationCM002461.1:743407..743487 -

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Properties
Property NameValue
Protein idEWM27100.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100046g26.5139.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:744403..744490 -
CM002461.1supercontigCM002461.1:744236..744294 -
CM002461.1supercontigCM002461.1:743604..743978 -
CM002461.1supercontigCM002461.1:743407..743487 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27100.1 vs. NCBI_GenBank
Match: gi|585109277|gb|EWM27100.1| (hypothetical protein Naga_100046g26 [Nannochloropsis gaditana])

HSP 1 Score: 398.282 bits (1022), Expect = 3.273e-140
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 
Query:    1 MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGAPSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV 200
            MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGAPSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV
Sbjct:    1 MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGAPSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV 200
[Close]
BLAST of EWM27100.1 vs. NCBI_GenBank
Match: gi|585109278|gb|EWM27101.1| (hypothetical protein Naga_100046g26 [Nannochloropsis gaditana])

HSP 1 Score: 393.66 bits (1010), Expect = 1.945e-138
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0 
Query:    1 MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGA-PSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV 200
            MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGA PSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV
Sbjct:    1 MSMEEHTTSFSESGRQGSDGGLTDVLKDDESEAAAAVASTATEEEDEGAQPSSQNVIPADSLANGFSVAKGFLASGWSQARKSIATLQDSEAVHKMREASKPFVGAVVEGGKVVGDRLHHTAEAAKPGLEAVGRRVSGAVEHLSERTRPALEKAGETIKKTTKQVVDEGKPMVKKVGDFFNDNLGGKKGGGGGDGDPPTTV 201
The following BLAST results are available for this feature:
BLAST of EWM27100.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109277|gb|EWM27100.1|3.273e-140100.00hypothetical protein Naga_100046g26 [Nannochlorops... [more]
gi|585109278|gb|EWM27101.1|1.945e-13899.50hypothetical protein Naga_100046g26 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3578rna3578Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications