EWM27215.1, cds3530 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|585109395|gb|EWM27215.1| (dna polymerase eta [Nannochloropsis gaditana]) HSP 1 Score: 1657.5 bits (4291), Expect = 0.000e+0 Identity = 805/805 (100.00%), Postives = 805/805 (100.00%), Query Frame = 0
Query: 1 MNQENDDGEAEEEHDDIRDEADRSFLTHVHGTLLSSSLAGGADCTSTSPASKVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPKFGANSTHSAVDSGSNSKATAPPEYSFSDSKSSSPCAGAGDLSTDPPPAPCESFFKASRSTPIAKQGSPVEEIAETRKRQLDGETAAKRESTNMGGLDPTVIDPAVLEELPPHIRREITDGIAAATASGKRNKFSSRSAPNEKKIDTYFPKGGPHTGWPTPARPPPSSLSVKRGTLDRFLKTTK 805
MNQENDDGEAEEEHDDIRDEADRSFLTHVHGTLLSSSLAGGADCTSTSPASKVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPKFGANSTHSAVDSGSNSKATAPPEYSFSDSKSSSPCAGAGDLSTDPPPAPCESFFKASRSTPIAKQGSPVEEIAETRKRQLDGETAAKRESTNMGGLDPTVIDPAVLEELPPHIRREITDGIAAATASGKRNKFSSRSAPNEKKIDTYFPKGGPHTGWPTPARPPPSSLSVKRGTLDRFLKTTK
Sbjct: 1 MNQENDDGEAEEEHDDIRDEADRSFLTHVHGTLLSSSLAGGADCTSTSPASKVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPKFGANSTHSAVDSGSNSKATAPPEYSFSDSKSSSPCAGAGDLSTDPPPAPCESFFKASRSTPIAKQGSPVEEIAETRKRQLDGETAAKRESTNMGGLDPTVIDPAVLEELPPHIRREITDGIAAATASGKRNKFSSRSAPNEKKIDTYFPKGGPHTGWPTPARPPPSSLSVKRGTLDRFLKTTK 805
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|308809351|ref|XP_003081985.1| (Translesion DNA polymerase-REV1 deoxycytidyl transferase (ISS) [Ostreococcus tauri] >gi|116060452|emb|CAL55788.1| DNA-repair protein, UmuC-like, N-terminal [Ostreococcus tauri]) HSP 1 Score: 275.018 bits (702), Expect = 9.788e-79 Identity = 200/594 (33.67%), Postives = 286/594 (48.15%), Query Frame = 0
Query: 52 KVIVHIDMDAFYCQVEA---GLDPSLKGKPIAVVQYAP--SGDLST--QTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPD-ITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTR------AAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMG-VGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPKFGANSTHS 630
+V+ H+D+DAFYCQVE G+D ++ P+ V QY P G + T Q R SLIAVSYEARARGVKR M AR +C D +VQV KADLT YR AGA V +IL+R G ERASIDEAY+DLTA A+ L + ++ R++ VAG IGG+ G V A+L A +AC A S + D + R A+ AWW+R AW +EK + GA I +R A ELGYT S G+A +K+LAKL S M+KP QT++ + LLA LP+ R++GLG FG++++E L TIGE+ P+ +LE + GE A W+ K+ G DDD V++R + KS+ GKTF G +R +E +WL +LA EL R D + R P+LLT+ S + + + SR P+RL +++ Q++LA L+ +W S + ++ + ++ASNF+ ++++S + K ++T S
Sbjct: 6 RVVAHLDLDAFYCQVERAAHGIDVNV---PLVVAQYDPFERGGVRTRDQGARRILRDGLERHSLIAVSYEARARGVKRNMRAIDARRLCGDGAVVVQVPTRRSKADLTAYRRAGAAVARILSRGGVMERASIDEAYLDLTANARRTLAETEWREVLATARKAHVAG-----------------AAPIGGK-------------------------GFVSKASLRAGSADGPQAAVEACAASTSGVTDEKTEKELEKETEAEPVDEEEERMRNYRPRPPDEASLAWWDREESAWGETEKLLAAGAYICHNLRKACVDELGYTLSAGIATNKMLAKLTSGMNKPASQTVLCPDHTEALLAELPIDRIRGLGAKFGRELVEGLDVKTIGELARTPIRKLEEICGEERAQWVRKVSLGQDDDPVKEREMPKSIGTGKTFRGALAIRSLESAKKWLAELAAELNDRCEDDRDEWNREPKLLTLGLSSPDELNTNSGHCSRRCPMRLGADEI-----------------------TQDALA-----LISKW-------SSGRSDWSITGMSVSASNFVTLERESGDVAEMLKNAKSTTGS 519
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|1199291480|gb|OUS46573.1| (Translesion DNA polymerase-REV1 deoxycytidyl transferase [Ostreococcus tauri]) HSP 1 Score: 271.166 bits (692), Expect = 2.768e-77 Identity = 201/594 (33.84%), Postives = 286/594 (48.15%), Query Frame = 0
Query: 52 KVIVHIDMDAFYCQVEA---GLDPSLKGKPIAVVQYAP--SGDLST--QTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPD-ITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTR------AAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMG-VGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPKFGANSTHS 630
+V+ H+D+DAFYCQVE G+D ++ P+ V QY P G + T Q R SLIAVSYEARARGVKR M AR +C D +VQV KADLT YR AGA V +IL+R G ERASIDEAY+DLTA ARR +A E ++ AT + V IGG+ G V A+L A +AC A S + + + R A+ AWW+R AW +EK + GA I +R A ELGYT S G+A +K+LAKL S M+KP QT++ + LLA LP+ R++GLG FG++++E L TIGE+ P+ +LE + GE A W+ K+ G DDD V++R + KS+ GKTF G +R +E +WL +LA EL R D + R P+LLT+ S + + + SR P+RL +++ Q++LA L+ +W S + ++ + ++ASNF+ ++++S + K ++T S
Sbjct: 6 RVVAHLDLDAFYCQVERAAHGIDANV---PLVVAQYDPFERGGVRTRDQGARRILRDGLERHSLIAVSYEARARGVKRNMRAIDARRLCGDGAVVVQVPTRRSKADLTAYRRAGAAVARILSRGGVMERASIDEAYLDLTA---------------NARR--TLAETEWREVLATARKAHVAGAAPIGGK-------------------------GFVSKASLRAGSADGPQAAVEACAASTSGVTEEKTEKETEKETEAEPVDEEEERMRNYRPRPPDEASLAWWDREESAWGETEKLLAAGAYICHNLRKACVDELGYTLSAGIATNKMLAKLTSGMNKPASQTVLCPDHTEALLAELPIDRIRGLGAKFGRELVEGLDVKTIGELARTPIRKLEEICGEERAQWVRKVSLGQDDDPVKEREMPKSIGTGKTFRGALAIRSLESAKKWLAELAAELNDRCEDDRDEWNREPKLLTLGLSSPDELNTNSGHCSRRCPMRLGADEI-----------------------TQDALA-----LISKW-------SSGRSDWSITGMSVSASNFVTLERESGDVAEMLKNAKSTTGS 519
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|545356141|ref|XP_005643819.1| (DNA/RNA polymerase, partial [Coccomyxa subellipsoidea C-169] >gi|384245783|gb|EIE19275.1| DNA/RNA polymerase, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 222.631 bits (566), Expect = 7.749e-61 Identity = 125/320 (39.06%), Postives = 187/320 (58.44%), Query Frame = 0
Query: 321 AWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVS-FQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQ-KSRMTSFFPKFGANSTHSAVDSGSNS 638
AWW RP+ AW ++ + CGAA+++E+RAAV ELGY+CS G+A +K+LAKL S MHKP+QQTL+ + +P L+A LP+ +L+ LGG FG+++M L +T+GE+ PL RLEA+ ++DA WL +L RG+DD+ V++R+L +S+SCGKTF G+ L+ +H+WL +L EL +R+ D + R+P+LLTV + G G + SRS LR P +Q +A+ GL L++RW + + +++LY+TASNF S +T F A S SGS +
Sbjct: 136 AWWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGIAHNKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGELSAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVHKWLGELGDELEERITADRADNERVPRLLTVGMWGEGGPGTSGGSVSRSCQLR------------------RPESQ---------PMAEDGLKLIKRW-------ASDRPGWAITSLYMTASNFQAAPTGSSTITRFLKPKSAPGQQSPPPSGSTA 421 HSP 2 Score: 133.265 bits (334), Expect = 1.624e-29 Identity = 68/112 (60.71%), Postives = 82/112 (73.21%), Query Frame = 0
Query: 79 IAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRL 190
+A +QY P+GDLST +R + SN SLIAV YEARA+GVKR M GD AR VCPD+ LVQV VAH KADLT+YR +G +V+ ILAR ERASIDE Y+D+T A+ RL
Sbjct: 1 LAELQYNPNGDLSTLRPDEERIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNLVQVPVAHGKADLTLYRASGKQVLNILARLSVAERASIDECYLDITEEAKRRL 112
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|1060224317|ref|XP_017840386.1| (PREDICTED: DNA polymerase eta [Drosophila busckii]) HSP 1 Score: 230.335 bits (586), Expect = 1.834e-60 Identity = 158/528 (29.92%), Postives = 250/528 (47.35%), Query Frame = 0
Query: 52 KVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYG-PTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPS-AQMGGRNDVQESLADQGLSL 577
+VI+ +DMD F+CQVE + P +GKP+AVVQY P +IAV+Y ARA+GV R M GD+A+ +C DI L +V +KAD + YR+AG +V +L R+ ERAS+DEAY+D+T R+ Q + TL +++ N +G + + K R ++P V R ++ D + S L LI S+A G+ RA+ A T GY CS G+A +K+LAKL + M+KPN+QT++ IP L LPV ++KGLGG FG+ V E LG +G+V++ + L+ + + WL + RG+D ++V R +KS+ C K F G NN+ ++ + WL +L+ E+ RL +D + R + + V + + G ++SRSAP+ ++ L+ A E ++ T + + GG + + ++ GLS+
Sbjct: 39 RVILLVDMDCFFCQVEEKMQPEYQGKPLAVVQYNP----------------WRGGGIIAVNYAARAKGVTRHMRGDEAKELCHDIILCKVPNIREKADTSKYRDAGKEVANVLQRFTQKLERASVDEAYLDVTETVNKRMEQL-------------------QTGEYTLKPQELVNTFSVGYECIGEYVNKITNRFANPYVDDA---------------RFMLSYDHNDLPAVRQSDLRLLIGASIA-------GEVRAAVKAET----------------------------------------GYECSAGIAHNKILAKLAAGMNKPNKQTILPLAEIPGLFDTLPVGKIKGLGGKFGETVCETLGVKFLGQVLKFSEAELQRKLDDKNGNWLHLIARGIDLEAVTPRFYSKSIGCCKKFPGRNNITGLKTLEHWLSELSSEINDRLEKDFMENNRKAKQMVVQY-VQEIDGEEVSSSRSAPITQCDQETLAKQALELIKTNTKTFLRAGGDSALNNAIRFLGLSV 468
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|924559935|gb|ALC44947.1| (DNApol-eta [Drosophila busckii]) HSP 1 Score: 201.445 bits (511), Expect = 1.056e-50 Identity = 147/505 (29.11%), Postives = 234/505 (46.34%), Query Frame = 0
Query: 75 KGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYG-PTERASIDEAYVDLTAMAQSRLRDFGPDMIVRARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPSVSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPS-AQMGGRNDVQESLADQGLSL 577
+GKP+AVVQY P +IAV+Y ARA+GV R M GD+A+ +C DI L +V +KAD + YR+AG +V +L R+ ERAS+DEAY+D+T R+ Q + TL +++ N +G + + K R ++P V R ++ D + S L LI S+A G+ RA+ A T GY CS G+A +K+LAKL + M+KPN+QT++ IP L LPV ++KGLGG FG+ V E LG +G+V++ + L+ + + WL + RG+D ++V R +KS+ C K F G NN+ ++ + WL +L+ E+ RL +D + R + + V + + G ++SRSAP+ ++ L+ A E ++ T + + GG + + ++ GLS+
Sbjct: 6 QGKPLAVVQYNP----------------WRGGGIIAVNYAARAKGVTRHMRGDEAKELCHDIILCKVPNIREKADTSKYRDAGKEVANVLQRFTQKLERASVDEAYLDVTETVNKRMEQL-------------------QTGEYTLKPQELVNTFSVGYECIGEYVNKITNRFANPYVDDA---------------RFMLSYDHNDLPAVRQSDLRLLIGASIA-------GEVRAAVKAET----------------------------------------GYECSAGIAHNKILAKLAAGMNKPNKQTILPLAEIPGLFDTLPVGKIKGLGGKFGETVCETLGVKFLGQVLKFSEAELQRKLDDKNGNWLHLIARGIDLEAVTPRFYSKSIGCCKKFPGRNNITGLKTLEHWLSELSSEINDRLEKDFMENNRKAKQMVVQY-VQEIDGEEVSSSRSAPITQCDQETLAKQALELIKTNTKTFLRAGGDSALNNAIRFLGLSV 412
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|552812782|ref|XP_005843786.1| (hypothetical protein CHLNCDRAFT_139920 [Chlorella variabilis] >gi|307103424|gb|EFN51684.1| hypothetical protein CHLNCDRAFT_139920 [Chlorella variabilis]) HSP 1 Score: 196.438 bits (498), Expect = 1.831e-49 Identity = 134/319 (42.01%), Postives = 182/319 (57.05%), Query Frame = 0
Query: 319 AAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSF----------QSMGVG------GHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQ-KSRMTSFF 620
AAAWW+RP W E+ + C AA +E+RAAV AELGY+CS G+A SKL+AKL S +HKP QQT++ + LL LP+ +LKGLGG G++VM +LG T+G++ PLSRLEA +GE +A WL L RG DD VE+RRLAKSV CGKTF G LR++ +H+WL +L GEL +RL+ D + ++R +LLTVSF Q G G+H +RS PL R E++A+ L+L++RW E LST+ + ASNF+ ++ S +T FF
Sbjct: 184 AAAWWQRPPHHWLPGERLLACAAAAAAELRAAVRAELGYSCSAGVAHSKLMAKLCSGLHKPAQQTVLPASAVAALLGQLPIPKLKGLGGKLGERVMSELGVETVGQLAAVPLSRLEAAFGEKEAQWLAALARGATDDKVEERRLAKSVGCGKTFRGRQALRDLAAVHKWLLELGGELAERLQEDLQENSREAKLLTVSFAPQLPWVATQQPGGTALFHAAPGYHAT-TRSCPL---------------------------RKATAEAIAEDALALIKRWAAEQG------QGWSLSTMDVAASNFVAVQSAASAITRFF 468 HSP 2 Score: 147.132 bits (370), Expect = 5.305e-33 Identity = 83/159 (52.20%), Postives = 96/159 (60.38%), Query Frame = 0
Query: 49 PASKVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLI-------------AVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFG 194
P K I H+D+DAFY QVE P L+G+P+ VVQY P G L T+ +R ++ SN SLI + YEARA GVKR M GDQARA CP I LV AH KADLT+YR G KV IL+R TERASIDE Y+DLT AQ RL G
Sbjct: 5 PLHKAICHVDLDAFYAQVEVKQHPELRGQPVGVVQYNPYGLLETRGPAENRVMNSSNGSLIAVRRAAPRRAAPPVLLYEARAAGVKRNMRGDQARAACPTIQLVP--TAHGKADLTLYRGEGKKVQDILSRLATTERASIDECYLDLTDEAQRRLAACG 161
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|302833114|ref|XP_002948121.1| (hypothetical protein VOLCADRAFT_116690 [Volvox carteri f. nagariensis] >gi|300266923|gb|EFJ51109.1| hypothetical protein VOLCADRAFT_116690, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 190.274 bits (482), Expect = 3.020e-46 Identity = 92/200 (46.00%), Postives = 136/200 (68.00%), Query Frame = 0
Query: 321 AWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDD-DSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQS 519
A+W RPL W E+ +V GA + +++R+A+ ELGY+CS G+A KL+AKLGS +HKPNQQT+++ +P LL LP+A+L+ LG FG++V E LG T+GE+ P SRLE+LYG AA L +L G+D+ D V R K++SCGKTF G++ L+++ Q+ L QLA E+++R+ D H R+P LT++ Q+
Sbjct: 145 AYWHRPLSRWDPHERLLVAGAVVAAQLRSALLRELGYSCSAGVAHYKLMAKLGSGLHKPNQQTVVLARAVPTLLRNLPLAKLRSLGPKFGEQVQEGLGIQTLGELWSVPASRLESLYGPEAAAGLMRLAAGMDEGDMVSPRLAPKTLSCGKTFRGSSALQDIRQVSPRLMQLAAEMSERIEADRRDHGRLPTQLTLTLQT 344
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|551669928|ref|XP_005837722.1| (hypothetical protein GUITHDRAFT_39857, partial [Guillardia theta CCMP2712] >gi|428181880|gb|EKX50742.1| hypothetical protein GUITHDRAFT_39857, partial [Guillardia theta CCMP2712]) HSP 1 Score: 173.711 bits (439), Expect = 1.600e-44 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 0
Query: 52 KVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARY-GPTERASIDEAYVDLTAMAQSRL----RDFGPDM---IVRARRESKVAGLEGQ 213
+V+ H+DMD FY QVE D SL+GKP+AV+QY P+GDL +RR S+ SLIAVSYEARA+GVKRIM G +AR CPD+ L+QV VAHKK+D+ +YREAGA+V+ +LAR+ ERASIDE Y D+T A +L R+FG D+ ++ ++ VAG E Q
Sbjct: 3 RVVAHVDMDCFYVQVEQRRDESLRGKPVAVIQYNPNGDLQDVRPDENRRCDHSDGSLIAVSYEARAKGVKRIMRGKEARQACPDLILIQVPVAHKKSDINLYREAGAEVVNVLARFSSACERASIDEVYCDITDAALLQLDEIERNFGADVGPTLLDEMDKTWVAGYEQQ 172 HSP 2 Score: 130.568 bits (327), Expect = 1.660e-29 Identity = 65/168 (38.69%), Postives = 101/168 (60.12%), Query Frame = 0
Query: 309 ASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGD-FGKKVMEDLGCSTIGEVVERPLSRLEALYGES----DAAWLFKLVRGVDDDSVEDRRLAKSVSCGKT 471
A T WW RPL W SE+ + GA ++++MR AV E +TCS G++ +K+LAKLGS +HKPNQQT++ E L+ LP++RL+GLGG+ GK + E+ T+GE+ + P L + +G+S W++++ +G+ V+D+ LAKS GK+
Sbjct: 167 AGYEQQTGNGQEEWWRRPLSRWKTSERLLAAGAQVVTKMRRAVLEETSFTCSAGISHNKILAKLGSGLHKPNQQTILPTEAAQKLMQDLPISRLRGLGGEKLGKAIQEEFHVETVGELQKIPCPLLVSKFGDSPKPPGGLWVYRIAKGICLQPVKDQELAKSRGSGKS 334
BLAST of EWM27215.1 vs. NCBI_GenBank
Match: gi|760437805|ref|XP_011395971.1| (DNA polymerase eta [Auxenochlorella protothecoides] >gi|675350661|gb|KFM23101.1| DNA polymerase eta [Auxenochlorella protothecoides]) HSP 1 Score: 176.407 bits (446), Expect = 1.294e-43 Identity = 153/424 (36.08%), Postives = 209/424 (49.29%), Query Frame = 0
Query: 347 MRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNN-LREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTLYLTASNFLEIKQKS-RMTSFFPKFGANSTHSAVDSGSNSKATAPPEYSFSDSKSSSPCAGAGD----LSTDPPPAPCESFFKASRSTPIAK-QGSPVEEIAETRKRQLDGETAAKRESTNMG-GLDPTVI----DPAVLEELPPHIRREITDGIAAA-----TASGKRN 753
+RA V + GYTCS GLA +KLLAKL S +HKP+ TL+ +P LLA LP+ARL+ LGG +G + + LG +T G++ P SRLEA+ GE DAAWL L RGVD + V +RRL KS SCGKTF G + L ++ + WL L EL +RL D E + R+P LLTVS+ SR AP L+ + V + +V + R ++AD +LVRRW S + + L AS F+ + +S +T FF GA + SA D+ S A A E AGAG+ + ++ ES AS S +A+ + SP E DG A+ +T G+ P + A L ELPP +R E + A A+GKR
Sbjct: 131 LRADVRTQTGYTCSAGLAHTKLLAKLASGLHKPDACTLVAAAGVPELLADLPLARLRMLGGKYGAGLTDALGVTTAGQLAALPRSRLEAVAGEKDAAWLGGLCRGVDGEEVVERRLPKSQSCGKTFRGRRSALADLNAVRHWLGVLGKELEERLAADREENGRMPTLLTVSW------------SRDAPPALAPDGWARVPSVPSVSR-----SCALRRPEAAAMADDAAALVRRWA------SVQPPGWNIGAMSLEASKFVMAQGESAAITRFFKAGGAQAGPSAADAVSPDGAGAKLEGD----------AGAGEGVHVVQSE------ESMCPASGSQQVAEGRRSPTHEPG-------DGAEASASPATRPAPGVRPGALLSSEQEAFLAELPPELRSEARAQLGVAVMRSRVAAGKRQ 508 HSP 2 Score: 138.658 bits (348), Expect = 7.642e-31 Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 49 PASKVIVHIDMDAFYCQVEAGLDPS-LKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAG 157
P +KVI H+D+DAFY QVEA DP+ L GKP+AVVQY P GDL T DR + S S+IAVSYEARA+GV+R M GD+A A+CPD+ LVQV AH KADLT+YR AG
Sbjct: 4 PRNKVICHVDLDAFYAQVEAKRDPNRLAGKPLAVVQYNPQGDLRTLLPEDDRVIPASPNSIIAVSYEARAQGVRRNMRGDEACALCPDLILVQVPTAHGKADLTLYRAAG 113 The following BLAST results are available for this feature:
BLAST of EWM27215.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|