EWM27193.1, cds3507 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|585109373|gb|EWM27193.1| (microtubule-associated protein rp eb family member 1 [Nannochloropsis gaditana]) HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0 Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0
Query: 1 MSAIDWSYHVAHVTQHLPIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 328
MSAIDWSYHVAHVTQHLPIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV
Sbjct: 1 MSAIDWSYHVAHVTQHLPIGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 328
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|585109372|gb|EWM27192.1| (microtubule-associated protein rp eb family member 1 [Nannochloropsis gaditana]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 328
IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV
Sbjct: 37 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAPTAVV 346
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|673029466|ref|XP_008868694.1| (hypothetical protein H310_05695 [Aphanomyces invadans] >gi|574475089|gb|ETW02089.1| hypothetical protein H310_05695 [Aphanomyces invadans]) HSP 1 Score: 255.758 bits (652), Expect = 1.268e-80 Identity = 141/292 (48.29%), Postives = 184/292 (63.01%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELN-NPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSD 309
IGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE++ NYK+LQ AF L+ID+ + V+KL+R KYQDNLEFMQW+KRFYELN + DYDP+ R KG GG A T A + +T T + + K RP +SS G A+ G ++ R + +AA+ E L R+ E LA+ N+ ++ IEGLEKERDFYF KL +E MLQE DE+ + + +I++IF+VLYA E + D
Sbjct: 8 IGMMDGAYFVGRKEILDWVNATCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYIQNYKILQKAFATLKIDRFIEVDKLIRGKYQDNLEFMQWYKRFYELNAGGSSDYDPIATRE--KGKGGAAYT---AKYKYAGAT-TAPSSAPAAKKRP--------VAASSKAGSAK---PPGAPVSVEKEKSIRRTSDSAASNKEIEDLTRENEELAEANSICRSQIEGLEKERDFYFGKLRDIESMLQE----LDES---QHTDIIKKIFEVLYAAEGDFSVPD 275
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|325189034|emb|CCA23562.1| (microtubule associated protein EB1 putative [Albugo laibachii Nc14]) HSP 1 Score: 251.521 bits (641), Expect = 9.043e-79 Identity = 138/303 (45.54%), Postives = 181/303 (59.74%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA-------GGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDE 312
IGMMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD IYPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+F+ELN YDPV R GKG G +I P+ A N+ SN L+ R+ GS +S R G A S + +TA+ + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE
Sbjct: 8 IGMMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSIYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFHELNASGQSYDPVAQREKGKGGIQFSNKHRGGTSSIAPSPA---------NIISNDLR----RRNAGSHVARNSFPSRTRTNRPPGAPTAMESQNAVTMASTASIVEKEKQLAEFKAANALLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNALVQDLFKLLYATED--GVAPMDE 288
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|698801418|ref|XP_009833738.1| (hypothetical protein H257_09273 [Aphanomyces astaci] >gi|574111330|gb|ETV76826.1| hypothetical protein H257_09273 [Aphanomyces astaci]) HSP 1 Score: 250.366 bits (638), Expect = 1.561e-78 Identity = 145/297 (48.82%), Postives = 188/297 (63.30%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELN-NPALDYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGA---RDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCD 311
IGMMD YFVGRK+I+DW+N T L+LTKVEQT +GAVACQ+LD IYPGKV ++KV+W A DYE++ NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN A DYDP+ R KG GG A + A F +T K RP + S++ +S+ GA +KE +GG TS S AA++ E +R+ E L + N L+ IEGLEKERDFYF KL +E MLQE DE+ + + +I++IF+VLYA E + D D
Sbjct: 8 IGMMDGAYFVGRKDILDWVNATCALSLTKVEQTCTGAVACQILDAIYPGKVQMSKVDWSANKDYEYIQNYKILQKTFTTLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNAGGAGDYDPIAQRE--KGKGGAAYS---AKYKFAGATAG---APAPAKKRP----VASTSKASAKPPGAPVSVEKEKAGGFRRTSDS---------AASSKELEESIRENEELNEANGILRGQIEGLEKERDFYFGKLRDIESMLQE----LDES---QHTDVIKKIFEVLYAAEGDFSVPDDD 276
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|635363171|emb|CCI48265.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 250.366 bits (638), Expect = 2.941e-78 Identity = 141/321 (43.93%), Postives = 186/321 (57.94%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA--------GGPARTIPPAAAPFCSSTR---TG--NMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAP 324
IGMMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD +YPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+FYELN L YDPV R GKG GG + P A+ R TG N+ N+L SR R G + S + TA+ A + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE C++ + +P
Sbjct: 8 IGMMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSLYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFYELNATGLSYDPVAQREKGKGGVQFSNKHRGGTSSMAPSPASTTSHDLRRRNTGSCNIARNNLPSR------------------TRTNRPPGAPVMMESQNVVTMANTASLAEKEKQLTEIKAANELLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNPLVQDLFKLLYATED--GVTPMDE-CTDVNLQLASP 300
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|669157856|ref|XP_008614490.1| (hypothetical protein SDRG_10284 [Saprolegnia diclina VS20] >gi|530733846|gb|EQC32088.1| hypothetical protein SDRG_10284 [Saprolegnia diclina VS20]) HSP 1 Score: 246.899 bits (629), Expect = 5.624e-77 Identity = 137/285 (48.07%), Postives = 177/285 (62.11%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPAL-DYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATE 302
IGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE+++NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN DYDP+ R KG GG A + + + S+ P R + SST SS+ A AI++ + + A++ DE L ++ E L++ N L+ IEGLEKERDFYF KL +E MLQE DE E + ++ IF +LYA E
Sbjct: 7 IGMMDGAYFVGRKEILDWVNGTCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYINNYKILQKVFTNLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNGGGTNDYDPIAQRE--KGKGGAAYSTKFKFTGGGGGSSASSTTSSQAAPAPKRRPVASSTKSSAKPPSAPSSIEKERAISS------KRQSEASSNAEVDE-LTKENEALSEANGILRGQIEGLEKERDFYFGKLRDIELMLQE----LDET---EHTETVKSIFNILYAAE 275
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|635363170|emb|CCI48264.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 245.358 bits (625), Expect = 1.717e-76 Identity = 139/319 (43.57%), Postives = 184/319 (57.68%), Query Frame = 0
Query: 21 MMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA--------GGPARTIPPAAAPFCSSTR---TG--NMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAEN--LAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATENATGLSDCDEPCSEAAAAVEAP 324
MMD YFVGRKEI+DWIN+T NLTKVEQT +GA+ACQ+LD +YPGKVP++KV+W A DYE++ NYK+LQ FT L+IDK++ V++L+R KYQDNLEFMQWFK+FYELN L YDPV R GKG GG + P A+ R TG N+ N+L SR R G + S + TA+ A + KA N L EN L+A + GLE ERDFYF KL +E +LQ + E + L++++FK+LYATE+ G++ DE C++ + +P
Sbjct: 1 MMDGAYFVGRKEILDWINQTCHTNLTKVEQTCTGAIACQILDSLYPGKVPMSKVDWSANKDYEYIQNYKVLQKCFTNLKIDKYVDVDRLIRGKYQDNLEFMQWFKKFYELNATGLSYDPVAQREKGKGGVQFSNKHRGGTSSMAPSPASTTSHDLRRRNTGSCNIARNNLPSR------------------TRTNRPPGAPVMMESQNVVTMANTASLAEKEKQLTEIKAANELLTDENGELRAAVTGLETERDFYFGKLRDIEILLQNIEDG-------EQNPLVQDLFKLLYATED--GVTPMDE-CTDVNLQLASP 291
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|813149483|ref|XP_012200388.1| (hypothetical protein SPRG_05713 [Saprolegnia parasitica CBS 223.65] >gi|641534877|gb|KDO28807.1| hypothetical protein SPRG_05713 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 245.358 bits (625), Expect = 2.344e-76 Identity = 133/282 (47.16%), Postives = 175/282 (62.06%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPAL-DYDPVVARAGGKGAGGPARTIPPAAAPFCSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLY 299
IGMMD YFVGRKEI+DW+N T L LTKVEQT +GAVACQ+LD IYPGKVP++KV+W A DYE+++NYK+LQ FT L+ID+H+ V+KL+R KYQDNLEFMQW+KRFYELN DYDP+ R GKG + + + + S+ P R + SST SS+ A AI++ + + A++ DE L ++ E L++ N L+ IEGLEKERDFYF KL +E MLQE DE+ E + ++ IF +LY
Sbjct: 7 IGMMDGAYFVGRKEILDWVNATCGLGLTKVEQTCTGAVACQILDAIYPGKVPMSKVDWSANKDYEYINNYKILQKVFTNLKIDRHIEVDKLIRGKYQDNLEFMQWYKRFYELNGGGTNDYDPIAQREKGKGGAAYSTKFKFTGSGGGGGSSASSTASSQAAPAPKRRPVASSTKSSAKPPSAPSSIEKERAISS------KRQSEASSNAEVDE-LTKENEALSEANGILRGQIEGLEKERDFYFGKLRDIELMLQE----LDES---EHTETVKSIFNILY 274
BLAST of EWM27193.1 vs. NCBI_GenBank
Match: gi|301098790|ref|XP_002898487.1| (microtubule -associated protein EB1 [Phytophthora infestans T30-4] >gi|262104912|gb|EEY62964.1| microtubule -associated protein EB1 [Phytophthora infestans T30-4]) HSP 1 Score: 241.121 bits (614), Expect = 1.753e-74 Identity = 137/297 (46.13%), Postives = 181/297 (60.94%), Query Frame = 0
Query: 19 IGMMDAGYFVGRKEIVDWINETLQLNLTKVEQTASGAVACQLLDRIYPGKVPLNKVNWEAKLDYEFLSNYKLLQTAFTKLQIDKHLPVEKLVRAKYQDNLEFMQWFKRFYELNNPALDYDPVVARAGGKGA-------GGPARTIPPAAAPF------CSSTRTGNMPSNSLKSRPSSRSIGSSTGSSSGNGGARDKENSGGAIATSSSHGGRNVTTAAAATVADEALLRKAENLAQENTTLQATIEGLEKERDFYFEKLTVVEEMLQERQAAADENFSQEASLLIEEIFKVLYATE 302
+ +MD YFVGRKEI+DWIN +NL+KVEQT +GAVACQ+LD +YPGKV ++KV+W A DYE++ NYK+LQ AF +L+IDKH+ V++LVR KYQDNLEFMQWFK FYE N YDP+ R GKG GG A + P AAP +++R G P + S ++R+ +STG++ G+ ++ A + + A E L E L E+ L+A +E LEKERDFYF KL VE MLQ AA++N E++ L + IFKVLYATE
Sbjct: 6 MSLMDGTYFVGRKEILDWINSLCAINLSKVEQTCTGAVACQILDAMYPGKVQMSKVDWAANKDYEYIQNYKVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQWFKAFYERNASGQPYDPIAQREKGKGGAQYTQKFGGGASSSTP-AAPLRRKVGATATSRVGRTPPGAPTSAGAARTARTSTGATRRPVGSAASASAAAAAPSEADTEAAVAAATAPLEKELEELTANNEALTNESGELRAMVESLEKERDFYFNKLREVEIMLQ----AAEDN---ESNPLAQAIFKVLYATE 294 The following BLAST results are available for this feature:
BLAST of EWM27193.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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