EWM27210.1, cds3505 (CDS) Nannochloropsis gaditana

Overview
NameEWM27210.1
Unique Namecds3505
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:589343..591232 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27210.1
Productrme1-like gtpase atpase without a c-terminal eh domain protein
Orig transcript idgnl|cribi|Naga_100010g73.6180.mrna
GeneRME1L4
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:589343..591232 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|585109390|gb|EWM27210.1| (rme1-like gtpase atpase without a c-terminal eh domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1300.03 bits (3363), Expect = 0.000e+0
Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query:    1 MYFKVFLLFVESSSCTYGVETHNVTVLKKMLVHCHLAGRQRLLLRSGSPKPSLLTLLRFVRRLPLERSLSTDDGNTTHSGTIKLDSQRRVLQRCDELQSYLQPINDRLRGPLEKCSDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFSKYTKDRDGMPERGGKFGEIGQVRPYCHGRQGRNHASTHENYHSWGRACFLP 629
            MYFKVFLLFVESSSCTYGVETHNVTVLKKMLVHCHLAGRQRLLLRSGSPKPSLLTLLRFVRRLPLERSLSTDDGNTTHSGTIKLDSQRRVLQRCDELQSYLQPINDRLRGPLEKCSDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFSKYTKDRDGMPERGGKFGEIGQVRPYCHGRQGRNHASTHENYHSWGRACFLP
Sbjct:    1 MYFKVFLLFVESSSCTYGVETHNVTVLKKMLVHCHLAGRQRLLLRSGSPKPSLLTLLRFVRRLPLERSLSTDDGNTTHSGTIKLDSQRRVLQRCDELQSYLQPINDRLRGPLEKCSDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFSKYTKDRDGMPERGGKFGEIGQVRPYCHGRQGRNHASTHENYHSWGRACFLP 629          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|298710163|emb|CBJ31873.1| (RME1L4, RME1-like GTPase/ATPase without a C-terminal EH domain [Ectocarpus siliculosus])

HSP 1 Score: 518.464 bits (1334), Expect = 1.252e-175
Identity = 279/503 (55.47%), Postives = 349/503 (69.38%), Query Frame = 0
Query:   81 TIKLDSQRRVLQRCDELQ-SYLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHA-SASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAA-SLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTF 577
            T+    Q  ++++CD+L  S++QP+ND+  GPLEK      ++  +PFVF+LGNHSSGKSSF+NYV  R IQTAGVAPTDDSFTIIAPGP+D+DQDGP+ +GDPDMGF+GLR FGP L HHT+LK+R+G +T  FM+VDSPGMIDSP + S  + S     +   KG +T        RGYDF+GV RWFA+RADVILLFFDPDKPGTTGETLSILT SLAG DHKLY+VLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLP           SR    G E E+E   S  GL DLE +R++V  EV+KAPKRRIDNVITRL DSVHL+Q+H  VL+AL+ D+ R     R G   +   AG G  GG ++LG   +  +  + +    AGG  + N K LK     + S EGL   F ++Y R V EGDE + + W+R    L + L + +G D   + +V  +E +E+Q IL+ E+P+LRR AAPV ++F
Sbjct:   46 TVDSKVQAEIMEKCDDLHASFIQPLNDKTAGPLEKLQTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGPSDLDQDGPALVGDPDMGFSGLRQFGPTLTHHTELKVRSGTSTNSFMMVDSPGMIDSPMSRSIYERSDPDSPAGRGKGADT-------SRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLAGKDHKLYVVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV---------KSRDGGAG-EGEVELSLSS-GLHDLEATRDDVAAEVMKAPKRRIDNVITRLTDSVHLLQVHTTVLDALQKDY-RNAKLIRHGTTFAALAAGGGLSGGSVFLGAPIEMAVGAAGMALASAGGLQFYNSKALKAKHEEMISVEGLNHYFGKMYTREVSEGDESITASWQRIRHGLHLSLAS-LGID--GVSRVKASEQRELQKILDTEIPSLRRQAAPVQFSF 526          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|223993955|ref|XP_002286661.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977976|gb|EED96302.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 507.294 bits (1305), Expect = 3.850e-170
Identity = 267/488 (54.71%), Postives = 329/488 (67.42%), Query Frame = 0
Query:   85 DSQRRVLQRCDELQSYLQPINDRLRGPLEKCSDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAP 572
            D  + ++ +   L S + P+N  LRGPL K SD+   LPFVFL+GNHSSGKSSF+NYV  R +QTAGVAPTDD FT+IAPGP D+DQDGP+ +GDPD+GF GLR FGP LIHH QLK+R G+    FM+VDSPGMIDSP +S       S+ ++     +T SA   +DRGYDFQGV RWFA+RADV+LLFFDPDKPGTTGETLSIL  SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLP        S S+  A   ++           LADL ++R++VV EV+KAPKRRIDNVIT L DSVHL+ MHA+V E +R+ +++  W  R    S  +AG+G    G++  V  Q          +G GG  + N   LK+    L S E L   F+R + R V E DEF  S+W+R    L++ L  + G  L   P V K +LQ +Q IL+EE+P LRRLA+P
Sbjct:  126 DLHQSIISQVTNLHSSIMPLNTTLRGPLAKNSDRGTSLPFVFLVGNHSSGKSSFINYVLGRSVQTAGVAPTDDCFTVIAPGPKDVDQDGPALVGDPDIGFEGLRQFGPTLIHHAQLKVREGIQNQNFMMVDSPGMIDSPVSSGGMSMGYSMGNSGMHSSSTSSAV--MDRGYDFQGVVRWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPVKRDDNDAS-STNIAQEALDQR--------ALADLHQTRDDVVAEVMKAPKRRIDNVITNLHDSVHLLLMHAVVAEDVRSRYSKRQWENRIQEFSSLVAGVGLAALGLHFSVPPQFTGGVVAATVVGVGGLRWFNSSKLKDAEEQLLSVEELSASFQRTHPREVNEADEFYASVWQRVRDPLKLSL-WRTG--LSDFPAVKKGDLQHLQMILDEEIPRLRRLASP 599          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|570968267|gb|ETP31386.1| (hypothetical protein F442_19749, partial [Phytophthora parasitica P10297])

HSP 1 Score: 484.182 bits (1245), Expect = 5.016e-162
Identity = 265/538 (49.26%), Postives = 343/538 (63.75%), Query Frame = 0
Query:   53 LLTLLRFVRRLPL--ERSLSTDDGNTTHSGTIKLDSQR--RVLQRCDELQS-YLQPINDRLRGPLEKC--SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPS-----PSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFS 578
            L  L R   R PL   R LS+   +   +G   +D ++  R++Q+   L++  L P+N++L GPL++    +K P LPFVFLLGNHSSGKSSF+NY+  R +Q+ GVAPTDD FTIIAPG  D+DQDGP+ +GDPD+GF+GLR +GP LI  TQLK+R G+    FMLVDSPGMIDSPH+   Q       PS  +S   +  N+   ++  DRGY+F  V RW+A+RADVILLFFDPDKPGTTGETLSILT+SL GMDHKL++VLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P    + Q       AA G+         G  + DL+  REEVV EV +AP+RR+DN+IT L DS  L++MHA V E LR  +A E WR  A  A+  + G       +  GV  +     SV   L + G V+ N  ++ +    L   + L  +F R Y R + EGDE+V SLWKR  PSLQ+  +T +G     +PK+  +E+  +  I+  E+P LRR  AP   + +
Sbjct:   17 LRALGRGALRRPLLASRRLSSLAASQAIAGDRAVDDEKWIRLMQQTSRLETNVLLPLNEKLLGPLDRKHREEKLPSLPFVFLLGNHSSGKSSFINYLLQRDVQSTGVAPTDDGFTIIAPGREDLDQDGPALVGDPDLGFSGLRVYGPALIQRTQLKVRKGIQAN-FMLVDSPGMIDSPHSPPHQSQFNYGGPSGRLSPQQQKSNSFKGQDS-DRGYEFPEVVRWYAERADVILLFFDPDKPGTTGETLSILTRSLVGMDHKLHLVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPTKDNQMQ-------AAEGL---------GASMKDLDAMREEVVSEVQRAPERRVDNLITNLYDSSRLLKMHAEVFEDLRARYASEKWRRSALVAATFIGGNALAASALASGVPIEAAAGLSVASVLASAGVVWHNSTVMAQLERDLLHEDSLGELFRRRYGRQLAEGDEYVLSLWKRVLPSLQVAAHT-LG--FSMMPKLKNSEIAAVDNIVSNEIPELRRQCAPTDSSLA 533          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|675210235|ref|XP_008914002.1| (hypothetical protein PPTG_17882 [Phytophthora parasitica INRA-310] >gi|568085779|gb|ETN00681.1| hypothetical protein PPTG_17882 [Phytophthora parasitica INRA-310] >gi|570937974|gb|ETP03231.1| hypothetical protein F441_19798 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 483.797 bits (1244), Expect = 5.181e-162
Identity = 265/538 (49.26%), Postives = 343/538 (63.75%), Query Frame = 0
Query:   53 LLTLLRFVRRLPL--ERSLSTDDGNTTHSGTIKLDSQR--RVLQRCDELQS-YLQPINDRLRGPLEKC--SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPS-----PSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFS 578
            L  L R   R PL   R LS+   +   +G   +D ++  R++Q+   L++  L P+N++L GPL++    +K P LPFVFLLGNHSSGKSSF+NY+  R +Q+ GVAPTDD FTIIAPG  D+DQDGP+ +GDPD+GF+GLR +GP LI  TQLK+R G+    FMLVDSPGMIDSPH+   Q       PS  +S   +  N+   ++  DRGY+F  V RW+A+RADVILLFFDPDKPGTTGETLSILT+SL GMDHKL++VLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P    + Q       AA G+         G  + DL+  REEVV EV +AP+RR+DN+IT L DS  L++MHA V E LR  +A E WR  A  A+  + G       +  GV  +     SV   L + G V+ N  ++ +    L   + L  +F R Y R + EGDE+V SLWKR  PSLQ+  +T +G     +PK+  +E+  +  I+  E+P LRR  AP   + +
Sbjct:    2 LRALGRGALRRPLLASRRLSSLAASQAIAGDRAVDDEKWIRLMQQTSRLETNVLLPLNEKLLGPLDRKHREEKLPSLPFVFLLGNHSSGKSSFINYLLQRDVQSTGVAPTDDGFTIIAPGREDLDQDGPALVGDPDLGFSGLRVYGPALIQRTQLKVRKGIQAN-FMLVDSPGMIDSPHSPPHQSQFNYGGPSGRLSPQQQKSNSFKGQDS-DRGYEFPEVVRWYAERADVILLFFDPDKPGTTGETLSILTRSLVGMDHKLHLVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPTKDNQMQ-------AAEGL---------GASMKDLDAMREEVVSEVQRAPERRVDNLITNLYDSSRLLKMHAEVFEDLRARYASEKWRRSALVAATFIGGNALAASALASGVPIEAAAGLSVASVLASAGVVWHNSTVMAQLERDLLHEDSLGELFRRRYGRQLAEGDEYVLSLWKRVLPSLQVAAHT-LG--FSMMPKLKNSEIAALDNIVSNEIPELRRQCAPTDSSLA 518          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|301096283|ref|XP_002897239.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107324|gb|EEY65376.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 483.411 bits (1243), Expect = 5.237e-162
Identity = 261/523 (49.90%), Postives = 338/523 (64.63%), Query Frame = 0
Query:   61 RRLPLERSLSTDDGNTTHSGTIKLDSQR--RVLQRCDELQS-YLQPINDRLRGPLEKC--SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPS-----PSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPV 573
            R L   R LS+   +   +G   +D ++  R++Q+   L++  L P+N++L GPL++    +K P LPFVFLLGNHSSGKSSF+NY+  R +Q+ GVAPTDD FTIIAPG  D+DQDGP+ +GDPD+GF+GLR +GP LI  TQLK+R G+    FMLVDSPGMIDSPH+   Q       PS  +S+  +  N+   ++  DRGY+F  V RW+A+RADVILLFFDPDKPGTTGETLSILT+SL GMDHKL++VLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P    + Q       AA G+         G  + DL+  REEVV EV +AP+RR+DN+IT L DS  L++MHA V E LR  +A E WR  A  A+  + G       +  GV  +     SV   L +GG  + N  ++ +    L   + L  +F R Y R + EGDE+V SLWKR  PSLQ+  +T +G     +PK+  +E+  +  I+  E+P LRR  AP 
Sbjct:   12 RPLLASRRLSSLAASQAIAGDHAIDDEKWIRLMQQTSRLETNVLLPLNEKLLGPLDRKHREEKLPSLPFVFLLGNHSSGKSSFINYLLQRDVQSTGVAPTDDGFTIIAPGREDLDQDGPALVGDPDLGFSGLRVYGPALIQRTQLKVRKGIQAN-FMLVDSPGMIDSPHSPPHQSQFNYTGPSDRLSSQQQRSNSFKGQDS-DRGYEFPEVVRWYAERADVILLFFDPDKPGTTGETLSILTRSLVGMDHKLHLVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPTKDNQMQ-------AAEGL---------GASMKDLDAMREEVVSEVQRAPERRVDNLITNLYDSSRLLKMHAEVFEDLRARYASEKWRRSALVAATFVGGNALAASALASGVPIEAAAGLSVASVLASGGVGWHNSTVMTQLERDLLHEDSLSELFRRRYGRQLAEGDEYVLSLWKRVLPSLQVAAHT-LG--FSMMPKLKNSEIAALDNIVSNEIPELRRQCAPT 513          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|566010483|gb|ETI33394.1| (hypothetical protein F443_19939, partial [Phytophthora parasitica P1569] >gi|567947948|gb|ETK73717.1| hypothetical protein L915_19398, partial [Phytophthora parasitica] >gi|567976629|gb|ETL27150.1| hypothetical protein L916_19291, partial [Phytophthora parasitica] >gi|568006109|gb|ETL80381.1| hypothetical protein L917_19125, partial [Phytophthora parasitica] >gi|568036002|gb|ETM33625.1| hypothetical protein L914_19174, partial [Phytophthora parasitica] >gi|570314190|gb|ETO62138.1| hypothetical protein F444_19929, partial [Phytophthora parasitica P1976])

HSP 1 Score: 483.797 bits (1244), Expect = 7.020e-162
Identity = 265/538 (49.26%), Postives = 343/538 (63.75%), Query Frame = 0
Query:   53 LLTLLRFVRRLPL--ERSLSTDDGNTTHSGTIKLDSQR--RVLQRCDELQS-YLQPINDRLRGPLEKC--SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPS-----PSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFS 578
            L  L R   R PL   R LS+   +   +G   +D ++  R++Q+   L++  L P+N++L GPL++    +K P LPFVFLLGNHSSGKSSF+NY+  R +Q+ GVAPTDD FTIIAPG  D+DQDGP+ +GDPD+GF+GLR +GP LI  TQLK+R G+    FMLVDSPGMIDSPH+   Q       PS  +S   +  N+   ++  DRGY+F  V RW+A+RADVILLFFDPDKPGTTGETLSILT+SL GMDHKL++VLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P    + Q       AA G+         G  + DL+  REEVV EV +AP+RR+DN+IT L DS  L++MHA V E LR  +A E WR  A  A+  + G       +  GV  +     SV   L + G V+ N  ++ +    L   + L  +F R Y R + EGDE+V SLWKR  PSLQ+  +T +G     +PK+  +E+  +  I+  E+P LRR  AP   + +
Sbjct:   17 LRALGRGALRRPLLASRRLSSLAASQAIAGDRAVDDEKWIRLMQQTSRLETNVLLPLNEKLLGPLDRKHREEKLPSLPFVFLLGNHSSGKSSFINYLLQRDVQSTGVAPTDDGFTIIAPGREDLDQDGPALVGDPDLGFSGLRVYGPALIQRTQLKVRKGIQAN-FMLVDSPGMIDSPHSPPHQSQFNYGGPSGRLSPQQQKSNSFKGQDS-DRGYEFPEVVRWYAERADVILLFFDPDKPGTTGETLSILTRSLVGMDHKLHLVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPTKDNQMQ-------AAEGL---------GASMKDLDAMREEVVSEVQRAPERRVDNLITNLYDSSRLLKMHAEVFEDLRARYASEKWRRSALVAATFIGGNALAASALASGVPIEAAAGLSVASVLASAGVVWHNSTVMAQLERDLLHEDSLGELFRRRYGRQLAEGDEYVLSLWKRVLPSLQVAAHT-LG--FSMMPKLKNSEIAALDNIVSNEIPELRRQCAPTDSSLA 533          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|970660498|gb|KUF98043.1| (EH domain-containing protein 4 [Phytophthora nicotianae])

HSP 1 Score: 481.871 bits (1239), Expect = 2.146e-161
Identity = 264/538 (49.07%), Postives = 342/538 (63.57%), Query Frame = 0
Query:   53 LLTLLRFVRRLPL--ERSLSTDDGNTTHSGTIKLDSQR--RVLQRCDELQS-YLQPINDRLRGPLEKC--SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPS-----PSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTFS 578
            L  L R   R PL   R LS+   +   +G   +D ++  R++Q+   L++  L P+N++L GPL++    +K P LPFVFLLGNHSSGKSSF+NY+  R +Q+ GVAPTDD FTIIAPG  D+DQDGP+ +GDPD+GF+GLR +GP LI  TQLK+R G+    FMLVDSPGMIDSPH+   Q       PS  +S   +  N+   ++  DRGY+F  V RW+A+RADVILLFFDPDKPGTTGETLSILT+SL GMDHKL++VLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P    + Q       AA G+         G  + DL+  REEVV EV +AP+RR+DN+IT L DS  L++MHA V E LR  +A E WR  A  A+  + G       +  GV  +     SV     + G V+ N  ++ +    L   + L  +F R Y R + EGDE+V SLWKR  PSLQ+  +T +G     +PK+  +E+  +  I+  E+P LRR  AP   + +
Sbjct:    2 LRALGRGALRRPLLASRRLSSLAASQAIAGDRAVDDEKWIRLMQQTSRLETNVLLPLNEKLLGPLDRKHREEKLPSLPFVFLLGNHSSGKSSFINYLLQRDVQSTGVAPTDDGFTIIAPGREDLDQDGPALVGDPDLGFSGLRVYGPALIQRTQLKVRKGIQAN-FMLVDSPGMIDSPHSPPHQSQFNYGGPSGRLSPQQQKSNSFKGQDS-DRGYEFPEVVRWYAERADVILLFFDPDKPGTTGETLSILTRSLVGMDHKLHLVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPTKDNQMQ-------AAEGL---------GASMKDLDAMREEVVSEVQRAPERRVDNLITNLYDSSRLLKMHAEVFEDLRARYASEKWRRSALVAATFIGGNALAASALASGVPIEAAAGLSVASVFASAGVVWHNSTVMAQLERDLLHEDSLGELFRRRYGRQLAEGDEYVLSLWKRVLPSLQVAAHT-LG--FSMMPKLKNSEIAALDNIVSNEIPELRRQCAPTDSSLA 518          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|813119032|ref|XP_012196138.1| (hypothetical protein SPRG_02197 [Saprolegnia parasitica CBS 223.65] >gi|641539581|gb|KDO33390.1| hypothetical protein SPRG_02197 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 479.945 bits (1234), Expect = 5.131e-161
Identity = 263/523 (50.29%), Postives = 329/523 (62.91%), Query Frame = 0
Query:   55 TLLRFVRRLPLERSLSTDDGNTTHSGTIKLDSQRRVLQRCDELQSYLQPINDRLRGPLEKC-SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLAT-TEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAVGGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLG--KLPKVSKAELQEIQCILEEEVPALRRLAAPV 573
            TLLR  R +    + + +  N    G ++L  +   ++R       L P+ND+L GPL +   D+ P LPFVFLLGNHSSGKSSF+N++  R IQT GVAPTDD FTII+ G  D DQDGP+ IGDPD+GF+GLR FGP+LI  T LKIRA +     FM+VDSPGMIDSP         +SL           + R+  DRGYDF  V +W+A+RADVILLFFDPDKPGTTGETLSILT SL GMDHKL+IVLNK DQF+KIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P     + +   +R    G+         G  L DLE SREEV+  V++AP+RR DN+ITRL DS  +++MHA V EA+R  ++RE W  R    S  L G  A+    ++    +   A SV   + A G  + N   L +    L S EGL   F R+Y R + E DEFV S+W+R  PSLQ+ L T     LG   LPKV   ++ E+Q I+ +++P LRR AAP 
Sbjct:    8 TLLRAPRAMAARWASTYEKSN---EGALELMRETSRMER-----EVLLPLNDKLCGPLNRAVEDRLPALPFVFLLGNHSSGKSSFINHILKRDIQTTGVAPTDDGFTIISNGSADYDQDGPALIGDPDLGFSGLRQFGPNLIQKTNLKIRAEIPMGNNFMMVDSPGMIDSP---------ASL-----------NMRSETDRGYDFPKVVQWYAERADVILLFFDPDKPGTTGETLSILTNSLVGMDHKLHIVLNKVDQFKKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPV----KDSQTGARTTETGL---------GSALDDLEASREEVINAVMRAPERRADNLITRLYDSARMLEMHATVFEAVRAQYSREKWS-RWAVTSSALVGGNALAASAFVSGMPEVAAAVSVASLVSASGLSWYNRNHLSDMEKDLLSEEGLTHHFRRIYGRQLAEKDEFVFSIWRRVLPSLQVALAT-----LGFQNLPKVKANDINELQKIIAQDIPRLRRQAAPT 483          
BLAST of EWM27210.1 vs. NCBI_GenBank
Match: gi|673014506|ref|XP_008861214.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574482812|gb|ETW09803.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 479.559 bits (1233), Expect = 7.769e-161
Identity = 260/486 (53.50%), Postives = 318/486 (65.43%), Query Frame = 0
Query:  101 LQPINDRLRGPLEKC-SDKAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGL-ATTEFMLVDSPGMIDSP---HASASQPSPSSLISASDKGDNTRSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSSRPAALGIESEIEGPSSGLG--LADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELW-RFRAGAASLCLAGMGAVGGGMYLGVAFQT----ILAFSVLYALG-AGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPV 573
            L P+ND+L GPL +   D+ P LPFVFLLGNHSSGKSSF+N+V  R +QT GVAPTDD FTII+ G +D DQDGP+ IGDPD+GF+GLR FGP+LI  T LKIRA +  +  FM+VDSPGMIDSP   HA++ Q                       DRGYDF  V +W+A+RADVILLFFDPDKPGTTGETLSILT SL GMDHKL+IVLNK DQFRKIHDFARAYGSLCWNLSKVIP KDLPRIYTMC+P   +R   S+++               +GLG  L DLE SR EV+  V++AP+RR DN+ITR+ DS  +++MHA V E++R  ++RE W RF    ++L       VGG      AF +    + A S + AL  A G  +     L E    L S +GL   F RLY R + E DEFV S+W+R  PSLQ+ LNT       KLPKV  AEL+ +Q I+ +++P LRR AAP 
Sbjct:   47 LLPLNDKLYGPLNRAVEDRLPSLPFVFLLGNHSSGKSSFINHVLQREVQTTGVAPTDDGFTIISNGTSDHDQDGPALIGDPDLGFSGLRQFGPNLIQKTNLKIRANIPISNHFMMVDSPGMIDSPASFHATSEQ-----------------------DRGYDFPKVVQWYAERADVILLFFDPDKPGTTGETLSILTNSLVGMDHKLHIVLNKVDQFRKIHDFARAYGSLCWNLSKVIPLKDLPRIYTMCIPVK-ERGDGSKTT--------------ETGLGSALEDLESSRNEVINAVMRAPERRADNLITRVYDSSRMLEMHATVFESVRAKYSREKWSRFFVTTSAL-------VGGNALAATAFMSGLPEVAAVSSVVALATASGLSWFYRNHLAELEKDLTSEDGLTQHFRRLYGRQLAERDEFVFSIWRRVLPSLQVALNTL---GFSKLPKVKPAELKALQSIVNDDIPRLRRQAAPT 484          
The following BLAST results are available for this feature:
BLAST of EWM27210.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109390|gb|EWM27210.1|0.000e+0100.00rme1-like gtpase atpase without a c-terminal eh do... [more]
gi|298710163|emb|CBJ31873.1|1.252e-17555.47RME1L4, RME1-like GTPase/ATPase without a C-termin... [more]
gi|223993955|ref|XP_002286661.1|3.850e-17054.71predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|570968267|gb|ETP31386.1|5.016e-16249.26hypothetical protein F442_19749, partial [Phytopht... [more]
gi|675210235|ref|XP_008914002.1|5.181e-16249.26hypothetical protein PPTG_17882 [Phytophthora para... [more]
gi|301096283|ref|XP_002897239.1|5.237e-16249.90conserved hypothetical protein [Phytophthora infes... [more]
gi|566010483|gb|ETI33394.1|7.020e-16249.26hypothetical protein F443_19939, partial [Phytopht... [more]
gi|970660498|gb|KUF98043.1|2.146e-16149.07EH domain-containing protein 4 [Phytophthora nicot... [more]
gi|813119032|ref|XP_012196138.1|5.131e-16150.29hypothetical protein SPRG_02197 [Saprolegnia paras... [more]
gi|673014506|ref|XP_008861214.1|7.769e-16153.50hypothetical protein, variant [Aphanomyces invadan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3514rna3514Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications