EWM27132.1, cds3494 (CDS) Nannochloropsis gaditana

Overview
NameEWM27132.1
Unique Namecds3494
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:560548..562458 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27132.1
Producttyrosinase
Orig transcript idgnl|cribi|Naga_100010g61.6102.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:560548..562458 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0030246carbohydrate binding
GO:0030248cellulose binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR008922Unchr_di-copper_centre
IPR000254Cellulose-bd_dom_fun
IPR002227Tyrosinase_Cu-bd
Homology
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|585109312|gb|EWM27132.1| (tyrosinase [Nannochloropsis gaditana])

HSP 1 Score: 1330.85 bits (3443), Expect = 0.000e+0
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0
Query:    1 MQTSSFNVAANVLLLTLIQFWAVVEAQPGMGWEAQCIGQWLQCGGRNYWGPTNCCPGTRCEYVNEYWWQCNPSQAPLAPMATPAPTPVVTTGNTVAPSDLTPDPTAPPSEPLENVPLDSPVPSPAPTHRPHHWGHHHHPSSTSATSTATPTPFPTEAGPPFWEQDCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRILDPANILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYETDIMSAYTFLNTCHWSTLKPNPILNISLPAPPMPEISPETRQSPPFPEKGVTAPLLHPSTVAALADAQKHQDMRSNTTGQSSHLRGKNYVPYHKKHRIPSTNASIHTKTIDKSGQDMQAILVPTKEWAAAQAKMAPYEPHGKGLIVEENRVFTACMGSDRQDNVEKKRAECLKVVLKRDCEMLGFICDLPDTYRDGMHMEADENVFKKDSMCARSCHG 636
            MQTSSFNVAANVLLLTLIQFWAVVEAQPGMGWEAQCIGQWLQCGGRNYWGPTNCCPGTRCEYVNEYWWQCNPSQAPLAPMATPAPTPVVTTGNTVAPSDLTPDPTAPPSEPLENVPLDSPVPSPAPTHRPHHWGHHHHPSSTSATSTATPTPFPTEAGPPFWEQDCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRILDPANILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYETDIMSAYTFLNTCHWSTLKPNPILNISLPAPPMPEISPETRQSPPFPEKGVTAPLLHPSTVAALADAQKHQDMRSNTTGQSSHLRGKNYVPYHKKHRIPSTNASIHTKTIDKSGQDMQAILVPTKEWAAAQAKMAPYEPHGKGLIVEENRVFTACMGSDRQDNVEKKRAECLKVVLKRDCEMLGFICDLPDTYRDGMHMEADENVFKKDSMCARSCHG
Sbjct:    1 MQTSSFNVAANVLLLTLIQFWAVVEAQPGMGWEAQCIGQWLQCGGRNYWGPTNCCPGTRCEYVNEYWWQCNPSQAPLAPMATPAPTPVVTTGNTVAPSDLTPDPTAPPSEPLENVPLDSPVPSPAPTHRPHHWGHHHHPSSTSATSTATPTPFPTEAGPPFWEQDCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRILDPANILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYETDIMSAYTFLNTCHWSTLKPNPILNISLPAPPMPEISPETRQSPPFPEKGVTAPLLHPSTVAALADAQKHQDMRSNTTGQSSHLRGKNYVPYHKKHRIPSTNASIHTKTIDKSGQDMQAILVPTKEWAAAQAKMAPYEPHGKGLIVEENRVFTACMGSDRQDNVEKKRAECLKVVLKRDCEMLGFICDLPDTYRDGMHMEADENVFKKDSMCARSCHG 636          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|857975343|emb|CEO98724.1| (hypothetical protein PBRA_006838 [Plasmodiophora brassicae])

HSP 1 Score: 153.68 bits (387), Expect = 2.750e-36
Identity = 92/284 (32.39%), Postives = 142/284 (50.00%), Query Frame = 0
Query:  169 VRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSF------------CMKEGPFAEWTNSKGGCLKRIGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHRI-LDPA--------------------NILDTDFKPDQVDVELAYAPGITTRSMWSTRELGYTYET 419
            VR+++  ++  E   ++ ALQ ++ SGLYD I  +H +   FN  H  D FLPWHR Y+L +E A+R +  + +C A+P+WDWT+DA     S +W        ++D F            C++ GPFA W+     CL+R  + +  F +  E+L+ I        DF  A E   H   H F+GG M    S D+P+F+LHH+F+D +W++WQDCH   L PA                     +++TD+          Y P +T   +   R+LGY+Y+ 
Sbjct:  123 VRRDLRLISAGERDLYVGALQAMRRSGLYDEIMWVHADKFNFNYAHLTDGFLPWHREYLLMMEDALRSVSPETNCLAIPFWDWTVDAANPMASIVW--------RDDYFGGNGVDVGNGKKCVRSGPFA-WSVLGNDCLQRDLNGAGFFATREEILNTIASNDNY-RDFSRALEL-FHDTVHRFIGGTMVLDNSADEPLFFLHHSFIDMLWSVWQDCHDYDLVPAASVRPGSNVFMGGYETGALGTVVNTDYNSVMPYRLSHYNPQVTPAGVHDIRKLGYSYDN 395          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183362383|gb|ORX89391.1| (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 141.739 bits (356), Expect = 3.469e-35
Identity = 82/203 (40.39%), Postives = 106/203 (52.22%), Query Frame = 0
Query:  170 RKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKRI---GSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIW 367
            RK I  ++  E   FI A+Q LK SG YD I AIH N   +   H    F PWHR Y+   E A++ +        +PYWDWTLD+     SP+W  FG  G+K+D+ C+  GPFA W +      CL+RI   G+    F+SP  +   I    +     R   E G H   H  +GG     ASP DPIF+LHHAF+DKIW
Sbjct:    8 RKEIRQISTAERNAFISAVQALKKSGRYDQIVAIHWNYVPYA--HSTPAFFPWHRQYIKNFELALQQINPNV---VLPYWDWTLDSQAPETSPIWKWFGGNGRKSDN-CLVTGPFANWRSPLPNSHCLQRIWDSGNTISAFYSPESINSYIRTSSSF-DQLRNNIEPGPHGTVHNNIGGDFMYMASPSDPIFFLHHAFIDKIW 203          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183370184|gb|ORX96097.1| (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 145.976 bits (367), Expect = 8.145e-35
Identity = 85/220 (38.64%), Postives = 117/220 (53.18%), Query Frame = 0
Query:  162 WEQ-DCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWT--NSKGGCLKR---IGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCHR 375
            W Q + + +R+ I  ++  E   FI+A+  LK SG YD + +IH    ++   H    F PWHR Y+   E A++          +PYWDWTLD+    ESP+W  FG  G++ DS C+ +GPFA W   N +  CL+R    G     F+SP E ++  +G      + R   E G H   H  +GG      S +DPIF+LHHAFVDKIWA WQ  HR
Sbjct:   19 WAQCNQYNLRREIRQISSSERDAFIKAVNDLKRSGRYDELVSIHLRYVSYA--HSTPAFFPWHRQYIRIFELALQRFN---PSVVLPYWDWTLDSQAPEESPIWEWFGGNGREGDS-CVVDGPFAFWRARNPRPHCLQRQWDSGDKISAFWSP-ESINHFIGVSRSFDNLRNNIEPGPHGSVHNNIGGDFRYMTSANDPIFFLHHAFVDKIWADWQRSHR 231          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183364942|gb|ORX91456.1| (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 143.28 bits (360), Expect = 1.116e-33
Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 0
Query:  168 RVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKRI--GSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCH 374
            RVR+    L+  E   FIEA+ TLK SG+YD +  +H   T     H    F  WHR ++ Q E+A+R +        +PYWDWT++AG    S +W  FG  G      C+ EGPF  W     +  CL R   G  +   F   + ++ I+ +     + R   E G H+  H  +GG     +SP+DP+FW+HHAFVDKIWA WQD +
Sbjct:   30 RVRREFRQLSNGEKTAFIEAINTLKQSGVYDRLVNVH--LTYVPHAHSTAPFFTWHRAFIHQFENALRAVN---PSLTLPYWDWTIEAGSPENSEIWRWFGGNGNGVGDSCLTEGPFGGWEARFPRRHCLSRRWDGGRTIPSFWSRQSVNNIIRRSRNYNELREYIEPGPHATVHFGVGGDFRVMSSPNDPLFWMHHAFVDKIWADWQDAN 235          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183362281|gb|ORX89317.1| (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 140.584 bits (353), Expect = 4.699e-33
Identity = 77/215 (35.81%), Postives = 112/215 (52.09%), Query Frame = 0
Query:  164 QDCFRV--RKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKRI--GSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQD 372
            Q C  +  R+    LT +E  +FI A+ TLK +GLYD +  +H +       H    F PWHR+++ Q E+A+R +        +PYWDWT+DA     S LW   G  G  N + C+ +GPF  W     +  CL R      S   F  A+ ++ I+ +     + R   E G H+  H  +GG     +SP+DP+FW+HHAF+DKIWA WQ+
Sbjct:   23 QGCGEINERREFRQLTAEERTNFITAVNTLKQTGLYDQLVNVHLSYVPHA--HSTPPFFPWHRFFIYQFENALRSIDPNM---MLPYWDWTIDAWSPESSELWSWLGGNGSGNRASCLLDGPFGGWQAPYPRYHCLARRWDNGQSISSFWSAQSINNIIRRSRSYDELRGYIEPGPHANVHFGIGGDFRVMSSPNDPLFWMHHAFIDKIWADWQE 232          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183355059|gb|ORX82792.1| (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 135.961 bits (341), Expect = 1.299e-32
Identity = 78/210 (37.14%), Postives = 112/210 (53.33%), Query Frame = 0
Query:  170 RKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKR---IGSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCH 374
            RK I  LT  E   FI+A+  LK+ G Y+ +   H N  +F   H    F PWHR ++ Q E A++ +  + S   +PYWDWTLD+     S ++  FG  G      C+++GPFA W     +  CL+R   + S    F++P EV++ I+       + R A E G H   H+ + G M+   S +DP+FWLHH+FVDKIW  WQ  H
Sbjct:    1 RKEIHQLTDQERNSFIDAVVRLKSDGTYNRLVESHIN--SFPYAHSTPGFFPWHRQFLKQFEMALQQIDSRLS---VPYWDWTLDSQAPELSKVFQWFGGNGA-GPRRCVEDGPFANWQIEIPERSCLRRTFNLQSKIAPFYAP-EVINQIISNSDTYEELREAIEGGPHGTVHMGVNGDMSRMGSTNDPLFWLHHSFVDKIWTEWQIAH 203          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183364944|gb|ORX91458.1| (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 139.813 bits (351), Expect = 1.426e-32
Identity = 78/211 (36.97%), Postives = 108/211 (51.18%), Query Frame = 0
Query:  168 RVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKRI--GSDSYRFFSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCH 374
            RVR+    L+  E   FIEA+ TLK SG+YD +  +H   T     H    F  WHR ++ Q E+A+R +        +PYWDWT++A     S +W  FG  G      C+ EGPF  W     +  CL R   G  S   F   + L+ I+ +     + R   E G H+  H  +GG     +SP+DP+FW+HHAFVDKIWA WQ+ +
Sbjct:   30 RVRREFRQLSNGEKTAFIEAINTLKQSGVYDRLVNVH--LTYVPHAHSTAPFFTWHRVFIHQFENALRAVN---PSLTLPYWDWTIEARSPENSEIWRWFGGNGNGVGDSCLTEGPFGGWEARFPRRHCLSRRWDGGRSISSFWSRQSLNNIIRRSRDYDELREYIEPGPHAAVHFGVGGDFRVMSSPNDPLFWMHHAFVDKIWADWQEAN 235          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183371600|gb|ORX97417.1| (Di-copper centre-containing protein, partial [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 135.191 bits (339), Expect = 2.119e-32
Identity = 76/209 (36.36%), Postives = 115/209 (55.02%), Query Frame = 0
Query:  168 RVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLF-HGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWTNS--KGGCLKRIGSDSYRF--FSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQ 371
            RVRK I  +T +E   ++ A+  LK    Y+    IH   +T+ ++ HG   F PWHR ++L  E+A+R++    +   +PYWDWT+++     S ++  +G  G+   S C+ +G FA WT S     CL+R   +  +   F  AEV++ I        DFR +FE+G H + H  + G M    SP+DPIFWLHH FVDK++  WQ
Sbjct:   30 RVRKEIRQMTDNERNAYLRAINELKKRNKYEQFAYIH---STYEVYAHGTPDFFPWHRQFLLNFENALREIDPSIN---IPYWDWTIESQSPETSIIFKWYGGNGQGR-SKCVVDGAFARWTLSYPNRHCLQRSFDEGNKIGSFYSAEVINAIQDTNDDFDDFRQSFESGPHGQVHNGISGDMKKMISPNDPIFWLHHGFVDKVYYDWQ 231          
BLAST of EWM27132.1 vs. NCBI_GenBank
Match: gi|1183369366|gb|ORX95341.1| (Di-copper centre-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 139.428 bits (350), Expect = 1.909e-31
Identity = 80/218 (36.70%), Postives = 112/218 (51.38%), Query Frame = 0
Query:  165 DCFRVRKNILSLTPDELADFIEALQTLKASGLYDTITAIHGNPTTFNLFHGNDYFLPWHRWYVLQIESAVRDLGGKFSCFAMPYWDWTLDAGRETESPLWGIFGPMGKKNDSFCMKEGPFAEWT------NSKGGCLKRIGSDSYRF--FSPAEVLDLIMGKKTLVGDFRPAFEAGAHSRPHLFLGGAMNSFASPDDPIFWLHHAFVDKIWAMWQDCH 374
            D  R R+ I  L+  E   FI ALQ +K SG Y+ +  IH     F L H N  F PWHR ++   E A+R++  + +   +PYWDW+LD+    +S  +  FG  G+K D  C+ +GPF  WT      N++  CLKR  S+  +   F   E+++  +       D R   E   H   H  +GG M+   S  DP FW+HHAFVD+IW  WQ  H
Sbjct:   48 DLIRARREIRQLSDKERQQFITALQKMKRSGSYERVANIHAQ--VFELIHNNPMFFPWHRKFLYDFEVAIREVDPEVT---IPYWDWSLDSQDPQDSVAFSWFGGNGRKVDR-CI-DGPFQNWTIVDPTINARR-CLKREFSNGDKIEPFVAPELINRDIKLAKTHEDLRALIEVDPHGNVHTGIGGDMSEHWSAQDPFFWMHHAFVDRIWERWQLQH 257          
The following BLAST results are available for this feature:
BLAST of EWM27132.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109312|gb|EWM27132.1|0.000e+0100.00tyrosinase [Nannochloropsis gaditana][more]
gi|857975343|emb|CEO98724.1|2.750e-3632.39hypothetical protein PBRA_006838 [Plasmodiophora b... [more]
gi|1183362383|gb|ORX89391.1|3.469e-3540.39Di-copper centre-containing protein, partial [Basi... [more]
gi|1183370184|gb|ORX96097.1|8.145e-3538.64Di-copper centre-containing protein [Basidiobolus ... [more]
gi|1183364942|gb|ORX91456.1|1.116e-3336.97Di-copper centre-containing protein [Basidiobolus ... [more]
gi|1183362281|gb|ORX89317.1|4.699e-3335.81Di-copper centre-containing protein [Basidiobolus ... [more]
gi|1183355059|gb|ORX82792.1|1.299e-3237.14Di-copper centre-containing protein, partial [Basi... [more]
gi|1183364944|gb|ORX91458.1|1.426e-3236.97Di-copper centre-containing protein [Basidiobolus ... [more]
gi|1183371600|gb|ORX97417.1|2.119e-3236.36Di-copper centre-containing protein, partial [Basi... [more]
gi|1183369366|gb|ORX95341.1|1.909e-3136.70Di-copper centre-containing protein [Basidiobolus ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3503rna3503Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications