EWM27185.1, cds3470 (CDS) Nannochloropsis gaditana

Overview
NameEWM27185.1
Unique Namecds3470
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:517088..517141 -
Alignment locationCM002461.1:516913..516996 -
Alignment locationCM002461.1:516575..516811 -
Alignment locationCM002461.1:516303..516416 -
Alignment locationCM002461.1:515823..516092 -
Alignment locationCM002461.1:515065..515619 -
Alignment locationCM002461.1:514781..514867 -
Alignment locationCM002461.1:514152..514562 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27185.1
Producttetratricopeptide repeat protein 30a
Orig transcript idgnl|cribi|Naga_100010g33.6155.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:517088..517141 -
CM002461.1supercontigCM002461.1:516913..516996 -
CM002461.1supercontigCM002461.1:516575..516811 -
CM002461.1supercontigCM002461.1:516303..516416 -
CM002461.1supercontigCM002461.1:515823..516092 -
CM002461.1supercontigCM002461.1:515065..515619 -
CM002461.1supercontigCM002461.1:514781..514867 -
CM002461.1supercontigCM002461.1:514152..514562 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0048856anatomical structure development
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005856cytoskeleton
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR013105TPR_2
IPR019734TPR_repeat
Homology
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|585109365|gb|EWM27185.1| (tetratricopeptide repeat protein 30a [Nannochloropsis gaditana])

HSP 1 Score: 1256.12 bits (3249), Expect = 0.000e+0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0
Query:    1 MLDALQHTFRHHLSGSLEGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSDQQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWYVCSHMACPQCGKAAFVGVKLRTI 603
            MLDALQHTFRHHLSGSLEGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSDQQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWYVCSHMACPQCGKAAFVGVKLRTI
Sbjct:    1 MLDALQHTFRHHLSGSLEGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSDQQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWYVCSHMACPQCGKAAFVGVKLRTI 603          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|704361112|pdb|4UZY|A (Chain A, Crystal Structure Of The Chlamydomonas Ift70 And Ift52 Complex)

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 337/566 (59.54%), Postives = 428/566 (75.62%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCK--YRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            EGQYT T+Y+ IK   +  AI  L+ QLQ +P SRA LSLLG+CYY++  Y  A + YE L+ L P  E+YK++YAQ+LY  G+Y +A  A V+VEG Q +   LL+  A  YE ++   C+  + + A ++P +++N G I++KEGK+E AR+K+ +A+  L Y+ +L YNIALC Y++KQFG ALK++ EIIE+ V+EHPELSVGSN DG+EVRSVGNS  L++T LIEAFNLKAAI +T+ N+E  KEAL DMPPR EEELDPVTLHN AL++M +DP  GF+KLN+LL  PP P ET+ N+LLL CK  + FYDLA D+L E  +     +S DL +YL+A I     PE A+++FD L  +H++QLR+LTK IQDARIARDN+AIK+A+ +YD+ LE YIP LMAMA IYW+   Y  VEK+FRQSAEFCSEHEVWKLNVAH FFMQ+N +KE++RYY+P+V KN  + LL    IVLANLCVSYIMTSQNE AEELMRK+EKEEER  + D  +P  HLCI+NLVIG LYCAKGN+EFG++RIIKSLEPYDKKL  DTWY
Sbjct:   17 EGQYTQTIYTLIKEQKFAEAIQHLQYQLQNVPESRAALSLLGYCYYYTGQYDMASQMYEQLVTLYPSNEDYKLYYAQSLYKGGMYPEASKAVVKVEGHQKAVTTLLV--ACSYEQDDLTGCRRQLDKCAPEDPDTMVNTGCIMFKEGKFEAARQKFNDAVQALGYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVEAAKEALTDMPPRAEEELDPVTLHNSALINMDSDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPSHGFYDLAADVLAENPQYAGKLLSPDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSSMQDPDKPCFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWY 579          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|159468488|ref|XP_001692406.1| (flagellar associated protein [Chlamydomonas reinhardtii] >gi|158278119|gb|EDP03884.1| flagellar associated protein [Chlamydomonas reinhardtii])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 337/566 (59.54%), Postives = 428/566 (75.62%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCK--YRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            EGQYT T+Y+ IK   +  AI  L+ QLQ +P SRA LSLLG+CYY++  Y  A + YE L+ L P  E+YK++YAQ+LY  G+Y +A  A V+VEG Q +   LL+  A  YE ++   C+  + + A ++P +++N G I++KEGK+E AR+K+ +A+  L Y+ +L YNIALC Y++KQFG ALK++ EIIE+ V+EHPELSVGSN DG+EVRSVGNS  L++T LIEAFNLKAAI +T+ N+E  KEAL DMPPR EEELDPVTLHN AL++M +DP  GF+KLN+LL  PP P ET+ N+LLL CK  + FYDLA D+L E  +     +S DL +YL+A I     PE A+++FD L  +H++QLR+LTK IQDARIARDN+AIK+A+ +YD+ LE YIP LMAMA IYW+   Y  VEK+FRQSAEFCSEHEVWKLNVAH FFMQ+N +KE++RYY+P+V KN  + LL    IVLANLCVSYIMTSQNE AEELMRK+EKEEER  + D  +P  HLCI+NLVIG LYCAKGN+EFG++RIIKSLEPYDKKL  DTWY
Sbjct:   13 EGQYTQTIYTLIKEQKFAEAIQHLQYQLQNVPESRAALSLLGYCYYYTGQYDMASQMYEQLVTLYPSNEDYKLYYAQSLYKGGMYPEASKAVVKVEGHQKAVTTLLV--ACSYEQDDLTGCRRQLDKCAPEDPDTMVNTGCIMFKEGKFEAARQKFNDAVQALGYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVEAAKEALTDMPPRAEEELDPVTLHNSALINMDSDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPSHGFYDLAADVLAENPQYAGKLLSPDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSSMQDPDKPCFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWY 575          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|1004146740|gb|KXZ54715.1| (hypothetical protein GPECTOR_4g783 [Gonium pectorale])

HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0
Identity = 338/566 (59.72%), Postives = 425/566 (75.09%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCK--YRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            +GQYT T+Y+ IK   +  AI  L+ QLQ +P SRA LSLLG+CYY+   Y  A + YE L+ L P  E+YK++Y+Q+LY  G+Y +A  A V+VEG Q +   LL+  A  YE ++   C+  + +  A++P +++N G IL+KEGKYE AR+K+ +A+  L Y+ +L YNIALC Y++KQFG ALK++ EIIE+ V+EHPELSVGSN DG+EVRSVGNS  L++T LIEAFNLKAAI +T+ N++  KEAL DMPPR EEELDPVTLHN AL++M  DP  GF+KLN+LL  PP P ET+ NVLLL CK  + FYDLA D+L E  +     +S DL +YL+A I     PE A+++FD L  +H++QLR+LTK IQDARIARDN+AIK+A+ +YD+ LE YIP LMAMA IYWE   Y  VEK+FRQSAEFCSEHEVWKLNVAH FFMQ+N +KE++RYY+P+V KN  + LL    IVLANLCVSYIMTSQNE AEELMRK+EKEEER  L D  +   HLCI+NLVIG LYCAKGN+EFG++RIIKSLEPYDKKL  DTWY
Sbjct:   13 DGQYTQTIYTLIKDQKFAEAITHLQYQLQNIPESRAALSLLGYCYYYIGQYEMASQMYEQLVTLYPNNEDYKLYYSQSLYKGGMYPEASKAVVKVEGHQKAVTTLLV--ACAYEQDDLTGCRRQLDKCVAEDPDTMVNTGCILFKEGKYEAARQKFNDAVQALGYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVDAAKEALTDMPPRAEEELDPVTLHNSALINMDTDPTGGFKKLNFLLQSPPFPPETFANVLLLYCKPTHGFYDLAADVLAENPQYAAKLLSQDLYDYLQAAIGRHKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWEMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSALQDPDKACFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWY 575          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|1183420355|gb|ORY44703.1| (TPR-like protein [Rhizoclosmatium globosum])

HSP 1 Score: 674.47 bits (1739), Expect = 0.000e+0
Identity = 328/565 (58.05%), Postives = 422/565 (74.69%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEA-GRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            EG+YTAT+Y  I+ G +   I +L  +LQ  P+SRA LSLLG+C++  Q++  A   YE LL   P  +EY+++YAQALY +G Y  A  A   +E P+++ + + LQSAIKYE+++   CK L+ Q A D+  ++IN   +LYKEGKYE+A  KY E L +  Y+A+L YN+ALC YQ KQ+  ALK I +IIERG+++HPELSVG   +G+EVRSVGNS +L +TYLIEAFNLKAAI + L N E  +EAL DMPPRLE+ELDPVTLHN+AL HM +DP  GF+KLN+LL  PP+P E +GN+LLL CKY + D+AGDL+ E+      + ++  L E+LEA++L    PE AY+KFD L  KH+D LRKLTK +Q+AR   D E +K+ + DYDD +ERYIPVLMA A+IYW+  NY  VEK+FR+S EFC+EH+VWKLNVAHV FMQE+K+KE+V +Y+PIV K+  E +L+   IVLANLCV+YIMTSQNE AEELMRKIEKEEERV   D  +  +HLCIVNLVIG LYCAKGN+EFGI+RIIKSLEP++KKL  DTWY
Sbjct:   26 EGKYTATIYGMIRDGRFQDVIKLLTNELQSFPKSRAALSLLGYCFFQVQDFAGAANCYEQLLRAYPEIDEYRLYYAQALYKSGQYQPAQKACQTLENPEFAHKVIKLQSAIKYEMDDLQGCKLLIDQGAPDDTDTMINQACLLYKEGKYEDACMKYAETLRITGYQAELCYNLALCHYQLKQYVPALKNIADIIERGIRDHPELSVGMATEGIEVRSVGNSQILHETYLIEAFNLKAAIEYRLKNFESAREALTDMPPRLEQELDPVTLHNQALTHMDDDPSTGFEKLNFLLQQPPTPPEVFGNLLLLYCKYGYLDMAGDLMAESVAMGSVSTLTPYLFEFLEASLLRQSSPEEAYRKFDDLATKHVDILRKLTKQVQEARQNMDEETVKRVVNDYDDAVERYIPVLMAQAKIYWDMENYASVEKVFRKSVEFCNEHDVWKLNVAHVLFMQESKYKEAVSFYEPIVKKH-YENILDITAIVLANLCVAYIMTSQNEEAEELMRKIEKEEERVAYEDPAKRTYHLCIVNLVIGTLYCAKGNYEFGISRIIKSLEPFNKKLGTDTWY 589          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|302840537|ref|XP_002951824.1| (hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis] >gi|300263072|gb|EFJ47275.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis])

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 333/569 (58.52%), Postives = 425/569 (74.69%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQ---RLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCK--YRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            +GQYT  +Y+ IK   +  AI  L+ QLQ    +P SRA LSLLG+CYY++  Y  A + YE L+ L P  E+YK++Y+Q+LY   +YT++  A+V+VEG Q +   LL+  A  YE ++   C+  + +   D+P +++N G I++KEGKYE AR+K+ +A+  L Y+ +L YNIALC Y++KQFG ALK++ EIIE+ V+EHPELSVGSN DG+EVRSVGNS  L++T LIEAFNLKAAI +T+ N++  KEAL DMPPR EEELDPVTLHN AL++M  DP  GF+KLN+LL  PP P ET+ N+LLL CK  + FYDLA D+L E  +     +S DL +YL+A I     PE A+++FD L  +H++QLR+LTK IQDARIARDN+AIK+A+ +YD+ LE YIP LMAMA IYW+   Y  VEK+FRQSAEFCSEHEVWKLNVAH FFMQ+N +KE++RYY+P+V KN  + LL    IVLANLCVSYIMTSQNE AEELMRK+EKEEER  L D  +   HLCI+NLVIG LYCAKGN+EFG++RIIKSLEPYDKKL  DTWY
Sbjct:   13 DGQYTQVIYTLIKDQKFTEAISHLQYQLQARGNIPESRAALSLLGYCYYYTGQYDLASQMYEQLVTLYPNNEDYKLYYSQSLYKVWMYTESSKAAVKVEGHQKAVTTLLV--ACAYEQDDLTGCRRQLDKCVPDDPDTMVNTGCIMFKEGKYEAARQKFNDAVQALGYQPELLYNIALCHYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVDAAKEALTDMPPRAEEELDPVTLHNSALINMDTDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPTHGFYDLAADVLAENPQYASKLLSQDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSALQDPDKACFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWY 578          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|955172983|emb|CUG80996.1| (cyclosome protein, putative [Bodo saltans])

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 320/568 (56.34%), Postives = 413/568 (72.71%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSD---LNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD--QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            EG +T+ +Y +I+   Y  A+ +L  QL+  PRSRA +SL+ +CYYH  ++ S  + YE L  +CPG EEY+++YAQ+LY AGLY DA+     ++  Q++ R + LQ+ I YE  E P  K+ + +  AD+P  ++  G +LYKEG YE A +K++ A + L ++ DL YN+ALC Y+ +Q+G +LK I EIIERG++EHPEL++GSN +G E RSVGN+ VL++T L+EAFNLKAAI + + N    KEAL DMPPRL+EELDPVTLHN ALV+M  DP  GF+K NYLL HPP P ET+ N+LL  C+Y++YDLA D+L E        +S     L ++L+  I +   P  AY+KFD L  KHIDQLRKLTK IQDA+   D E +K AL+ YD+ LE YIPVLM  A IYW+  NYP VEKLFRQSAEFCSEHE WKLNVAHVFFMQENK++E++RYY+P+V  N  E +LN   IVLANLCV+YIMTS N+ AEE+MRKIEKEEE++  +D  +QP+ HLCIVNLVIG LYCAKGNFEFGI+RIIKSLEPY +K+  DTWY
Sbjct:   29 EGNFTSVIYGHIRDHQYDEAVELLTAQLEEFPRSRAAMSLMAYCYYHMGDFHSCARLYEQLTKICPGVEEYRVYYAQSLYKAGLYQDAFKVCSLIDSEQHANRIVKLQACISYEQEELPQTKACLEKSHADDPEVIVLQGCVLYKEGNYEGALQKFMSAANALGFKPDLTYNMALCHYRMQQYGPSLKAIAEIIERGIEEHPELNIGSNTEGNEARSVGNTQVLRETALVEAFNLKAAIEYMMKNYGAAKEALTDMPPRLQEELDPVTLHNTALVNMAEDPTNGFKKFNYLLQHPPFPPETFQNLLLFYCRYQYYDLAADVLAENAHLSWKYLSQRNQPLYDFLDGLITAQTAPAEAYRKFDILAQKHIDQLRKLTKRIQDAKQNHDKEGVKMALKAYDEALEEYIPVLMTQANIYWDIENYPAVEKLFRQSAEFCSEHETWKLNVAHVFFMQENKFREAIRYYEPVVEAN-SENILNCSAIVLANLCVAYIMTSLNDKAEEVMRKIEKEEEKLTFADPEKQPL-HLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYHRKIMTDTWY 594          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|971515931|dbj|GAQ82289.1| (TPR Domain containing protein [Klebsormidium nitens])

HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0
Identity = 329/566 (58.13%), Postives = 423/566 (74.73%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCK--YRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSDQQPI-HHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            +GQ T++VY  IK G +     +L  QLQ  P SRA LSLLG+CYY+   +P A   YE L+ L P  ++YK+ YA++LY AG++ +A  A   V+G  + QR + LQ+ IKYE ++ P CK ++ Q   D+ +  +N G +LYKEGKY  A  K+ +A S+L  + +L YNIALC Y+ KQFG ALK++ EIIE+GV++HPELSVGS  DG+EVRSVGNS  L+++ LIEAFNLKAAI + + + +  KEALNDMPPR EEELDPVTLHN+AL++M +DP  GF+KLN+LL +PP P ET+GN+LLL CK  ++FYDLA D++ E     +T +S DL +YL+ATIL    PE AY+K+D L ++H+D LR+LTK+IQD R ARDNEAIK+A+ +YD+ LE YIP LMAMARIYW+  NY  VE +FRQSAEFCSEH+ WKLNVAH FFMQE K+KE+++YY+ IV K+  + +L+   IVLANLCVSYIMTSQNE+AEELMRKIEKEEE+V   D   +  HLCIVNLVIG LYCAK NFEFGI+RIIKSLEPY KK+  DTW+
Sbjct:   30 DGQVTSSVYGMIKDGKHKEVAQVLEQQLQFNPESRAALSLLGYCYYYLGMFPEAASMYEQLIRLHPDIDDYKVHYAKSLYKAGMFPEAAKAGAAVDG--FRQRMMNLQACIKYEQDDIPGCKMMLEQCTPDDVSVTVNMGCVLYKEGKYAEAHAKFGDAASVLGDQPELTYNIALCYYRQKQFGPALKHVAEIIEKGVRDHPELSVGSYMDGLEVRSVGNSQTLRESALIEAFNLKAAIEYVMKSTDAAKEALNDMPPRSEEELDPVTLHNQALMYMDDDPTTGFRKLNFLLQNPPFPPETFGNLLLLYCKPTHQFYDLAADVMAENTHLTYTHLSRDLYDYLDATILRQTVPEEAYRKYDELASRHVDVLRRLTKSIQDGRKARDNEAIKKAINEYDEALESYIPGLMAMARIYWDLENYSQVELIFRQSAEFCSEHDTWKLNVAHTFFMQETKFKEALKYYEMIVQKH-TDNILSVSAIVLANLCVSYIMTSQNESAEELMRKIEKEEEKVQSQDPYKLCFHLCIVNLVIGTLYCAKQNFEFGISRIIKSLEPYAKKIETDTWF 592          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|588320802|emb|CCW59539.1| (unnamed protein product [Phytomonas sp. isolate EM1])

HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0
Identity = 321/568 (56.51%), Postives = 416/568 (73.24%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSD---LNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD--QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            EG +TATVY YI+   Y  A+ +L  QL+  PRSRA LSL+ +CYY    Y  + K YE L+H+CP  EEY+++YAQALY AG Y D+   S  +E  QYS R   LQ+ I YE  + P  KS + + + ++P +++  G +LY+EG YE A EK+ EA + L  + +L YNIAL  Y+ +Q+ ++LK+I +II +GV+EHPEL++GSN +GVE RSVGN+PVL++T LIEAFNLKAAI F + N+   KEAL DMPPR +EELDPVTLHN AL++M +DP  GF+K N+LL +PP P+ET+ N+LL  CKY +YDLA D+L E        +S D   L ++L+  I +   P  AY+KFD L  KH DQLRK+TK IQDA+   D +A+K A+R YDD LE YIP+LMA A IYW   +Y MVEKLFRQSAEFCSEH+VWKLNVAHVFFMQENK++E++RYY+P+V  N  E++LN   IVLANLCVSYIMT+QNE AE++MR+IE+EEE +  SD  +QP+ HLCIVNLVIG LYC+KGNFEFG++RIIKSLEPY +KL  DTW+
Sbjct:   39 EGTFTATVYGYIRDHQYAEAVELLITQLEEFPRSRAALSLIAYCYYMMGEYMESAKLYEQLVHVCPNVEEYRVYYAQALYKAGAYQDSTRVSSMIESEQYSMRLTKLQAVIAYEQEDIPQTKSFLEKCSIEDPDTVVLQGCVLYREGNYEGALEKFQEAQNALGDKPELVYNIALAHYRMQQYALSLKHIGDIINKGVKEHPELNIGSNTEGVEARSVGNTPVLKETALIEAFNLKAAIEFQMQNVNAAKEALTDMPPRQDEELDPVTLHNTALINMNDDPASGFKKFNFLLQNPPFPVETFQNLLLFYCKYEYYDLAADVLAENQHLAWQYLSHDQQSLYDFLDGLITAQTSPAEAYRKFDILAQKHADQLRKMTKKIQDAKQKHDKDAVKLAVRQYDDALEEYIPILMAQANIYWCLESYSMVEKLFRQSAEFCSEHDVWKLNVAHVFFMQENKFREAIRYYEPVVAAN-QEKILNCSAIVLANLCVSYIMTTQNEKAEDIMRRIEREEEALTYSDPEKQPL-HLCIVNLVIGTLYCSKGNFEFGVSRIIKSLEPYHRKLMTDTWF 604          
BLAST of EWM27185.1 vs. NCBI_GenBank
Match: gi|556991031|ref|XP_006000165.1| (PREDICTED: tetratricopeptide repeat protein 30A isoform X2 [Latimeria chalumnae])

HSP 1 Score: 657.522 bits (1695), Expect = 0.000e+0
Identity = 320/564 (56.74%), Postives = 421/564 (74.65%), Query Frame = 0
Query:   18 EGQYTATVYSYIKGGNYHGAIPILRVQLQRLPRSRAVLSLLGFCYYHSQNYPSAIKTYEALLHLCPGQEEYKMFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSD-QQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580
            +G++TAT+Y  I+ G Y  AI ++  +LQ+  +SRA LSLLG+CYY  Q++ +A   YE L  L P  ++YK++YAQ+LY A +Y DA  A+  +E P Y  + L LQ+AIKY  ++    KSL+ Q  +D+P S IN G +LYKEG+YE   +K+I A+ ++ Y+ DL+YNIALC Y  KQ+  ALK+I +IIERG++EHPELSVG   +G++VRSVGN+ VL +T LIEAFNLKAAI + L N E  +EAL DMPPR EEELDPVTLHN+AL++M + P  GF+KL +LL   P P ET+GN+LLL CKY ++DLA D+L E     +  ++  L E+L+A I     PE A++KFD +  K  +QLRKLTK +Q+AR  RD++A+K+A+ DYD+ LE+YIPVLMA A+IYW   NY MVEK+FR+S EFC+EH+VWKLNVAHV FMQENK+KE++ +Y+PIV K+  + +LN   IVLANLCVSYIMTSQNE AEELMRKIEKEEE++   D  + I+HLCIVNLVIG LYCAKGN++FGI+R+IKSLEPY+KKL  DTWY
Sbjct:    8 DGEFTATIYKLIRDGRYGEAIHVISNELQKHFKSRAALSLLGYCYYQMQDFVNAADCYEQLTQLHPEVDDYKLYYAQSLYKACIYPDAMKATFLLENPTYQSKVLKLQAAIKYGEDDLSGAKSLVEQLPSDDPDSEINLGCLLYKEGQYEETCKKFITAMQVVGYKPDLSYNIALCYYSMKQYAPALKHIADIIERGIREHPELSVGMTTEGIDVRSVGNTLVLHETALIEAFNLKAAIEYQLRNFEAAQEALTDMPPRSEEELDPVTLHNQALMNMDSKPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYEFLDAMITCQTAPEEAFRKFDEMAAKLTEQLRKLTKQVQEARHNRDDDAVKKAVNDYDEALEKYIPVLMAQAKIYWNLENYQMVEKIFRKSVEFCNEHDVWKLNVAHVLFMQENKYKEAIGFYEPIVKKH-YDNILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLAYDDPDKKIYHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWY 570          
The following BLAST results are available for this feature:
BLAST of EWM27185.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109365|gb|EWM27185.1|0.000e+0100.00tetratricopeptide repeat protein 30a [Nannochlorop... [more]
gi|704361112|pdb|4UZY|A0.000e+059.54Chain A, Crystal Structure Of The Chlamydomonas If... [more]
gi|159468488|ref|XP_001692406.1|0.000e+059.54flagellar associated protein [Chlamydomonas reinha... [more]
gi|1004146740|gb|KXZ54715.1|0.000e+059.72hypothetical protein GPECTOR_4g783 [Gonium pectora... [more]
gi|1183420355|gb|ORY44703.1|0.000e+058.05TPR-like protein [Rhizoclosmatium globosum][more]
gi|302840537|ref|XP_002951824.1|0.000e+058.52hypothetical protein VOLCADRAFT_81612 [Volvox cart... [more]
gi|955172983|emb|CUG80996.1|0.000e+056.34cyclosome protein, putative [Bodo saltans][more]
gi|971515931|dbj|GAQ82289.1|0.000e+058.13TPR Domain containing protein [Klebsormidium niten... [more]
gi|588320802|emb|CCW59539.1|0.000e+056.51unnamed protein product [Phytomonas sp. isolate EM... [more]
gi|556991031|ref|XP_006000165.1|0.000e+056.74PREDICTED: tetratricopeptide repeat protein 30A is... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3479rna3479Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications