EWM27167.1, cds3458 (CDS) Nannochloropsis gaditana

Overview
NameEWM27167.1
Unique Namecds3458
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:487628..487688 -
Alignment locationCM002461.1:487208..487507 -
Alignment locationCM002461.1:485742..487129 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27167.1
Productglycyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100010g20.6137.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:487628..487688 -
CM002461.1supercontigCM002461.1:487208..487507 -
CM002461.1supercontigCM002461.1:485742..487129 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006426glycyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004820glycine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR022961Gly_tRNA_ligase_bac
IPR027031Gly-tRNA_synthase/POLG2
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR004154Anticodon-bd
IPR002315tRNA-synt_gly
Homology
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|585109347|gb|EWM27167.1| (glycyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1205.66 bits (3118), Expect = 0.000e+0
Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query:    1 MVGPKRRTSLVFAVLMLSTTRSFIASAFSNVQNAGFLGRGGGQIPGRVFRTAEQRRGLVRTPSRAPPTKELLVTSPDEDTTVSTYNMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEING 582
            MVGPKRRTSLVFAVLMLSTTRSFIASAFSNVQNAGFLGRGGGQIPGRVFRTAEQRRGLVRTPSRAPPTKELLVTSPDEDTTVSTYNMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEING
Sbjct:    1 MVGPKRRTSLVFAVLMLSTTRSFIASAFSNVQNAGFLGRGGGQIPGRVFRTAEQRRGLVRTPSRAPPTKELLVTSPDEDTTVSTYNMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEING 582          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|873230505|emb|CEM10310.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0
Identity = 346/500 (69.20%), Postives = 415/500 (83.00%), Query Frame = 0
Query:   86 NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDE----ANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEIN 581
            +M D+V++C+RRGFVFQSSEIYNG NGF+DYGPLGVE+  NIK RWW  MV  R+D+VGLD SII +P+ WEASGHV GF DPM+DC+ SK+RYRADQLYF +VEL E GE++GYI++LD  +    A+KL + L KKA  +G  K PL++KD T+A   E+ LIPSPATG PGSLTPPR FNLMF+TSVGAL+DA+S A+LRPETAQGIF NFKNV  T RVKVPFGIAQIGKAFRNEI PRNFIFRSREFEQMEIEYFIPP+E+ WP++Y +WI  +W WL SIG+REDLM  DVH K DLAHYA+ACTDI+F+FPFG+ EL GIAARGD+DL+QH+ +SGKSMEYFD     A+KRRYVPHVIEPS+GVDRLFLA++ SAY E++++GEKR  LKFHPS+AP K  V PLVKNKPE++ KAR I+++LKRRY+VFWD SG+IGRRYRR DE G PF ITVDFD+L+DDSVTVR+RDS  QTRMK+ DL  F  ++I+
Sbjct:  541 SMTDLVSLCRRRGFVFQSSEIYNGMNGFWDYGPLGVEVHRNIKNRWWDKMVREREDIVGLDCSIIMAPKTWEASGHVGGFSDPMIDCKESKMRYRADQLYFARVEL-ESGELLGYISMLDGDNNEAHAKKLVKTLMKKADVKGDTK-PLELKDATQAAPEEIPLIPSPATGIPGSLTPPREFNLMFETSVGALSDAASKAYLRPETAQGIFVNFKNVAQTSRVKVPFGIAQIGKAFRNEINPRNFIFRSREFEQMEIEYFIPPDEDAWPEYYKQWIGESWDWLKSIGLREDLMSYDVHQKCDLAHYARACTDIIFKFPFGESELMGIAARGDFDLSQHEKTSGKSMEYFDSDPNAADKRRYVPHVIEPSLGVDRLFLAVMVSAYVEEKVDGEKRTYLKFHPSLAPYKAAVLPLVKNKPELVSKARGIFEKLKRRYSVFWDASGSIGRRYRRADEVGVPFAITVDFDSLQDDSVTVRDRDSCEQTRMKISDLYPFLTQQID 1038          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|922887354|gb|KOO52976.1| (glycyl-tRNA synthetase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 730.324 bits (1884), Expect = 0.000e+0
Identity = 335/483 (69.36%), Postives = 405/483 (83.85%), Query Frame = 0
Query:   86 NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMK 568
            +++D++NVCKRRG +FQSSE+Y G+ GF+DYGPLGVEL+ NIKQ WWRDMVH RDD+VGLDSSII SP++W+ASGH+ GF DPMVDCR SKLR+RADQL++++ E+  DG+++GY++LL++ D+     + A KL++KAG  GT+     +KD T+A+  E +L+PSPATGE GSLTPPRAFNLMFQT+VGA+ D SS A+LRPETAQGIFTNFKNV +TGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFI  ++  WP  + +W++T W WL SIG+REDLM RDVH    LAHYA+ACTDI+F FPFG  EL G AARG++DLTQH  +SGKSMEYFD+  K +YVPHVIEPSIGVDRL LA++CSAYAEDE+ GEKR VLK HP +APIK  V PLVKNKPE++EKA+AIY +L+RRY V +D SG IGRRYRRMDE GTP+CITVDF+TLEDDSVT+RERDST Q R+K
Sbjct:  100 SIDDVINVCKRRGIIFQSSEVYGGYAGFWDYGPLGVELRANIKQAWWRDMVHRRDDVVGLDSSIIGSPKIWKASGHIDGFSDPMVDCRTSKLRFRADQLFWSRAEV--DGQLLGYVSLLETDDMDELVLEAATKLQRKAGLRGTLSCT-PVKDFTEASDEEQSLVPSPATGEAGSLTPPRAFNLMFQTNVGAMVDQSSVAYLRPETAQGIFTNFKNVVATGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIDDQDATWPVEHERWLQTMWNWLKSIGLREDLMARDVHESHKLAHYARACTDIMFTFPFGTQELMGCAARGNFDLTQHAAASGKSMEYFDDETKAKYVPHVIEPSIGVDRLMLAVLCSAYAEDEVGGEKRSVLKLHPRLAPIKAAVLPLVKNKPELVEKAQAIYKRLQRRYYVTYDDSGQIGRRYRRMDEVGTPYCITVDFETLEDDSVTIRERDSTLQRRIK 579          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1101101469|gb|OIO60394.1| (glycine--tRNA ligase [Verrucomicrobia bacterium CG1_02_43_26])

HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0
Identity = 330/505 (65.35%), Postives = 407/505 (80.59%), Query Frame = 0
Query:   79 DTTVSTY-NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEING 582
            DT   T   M++IV +CKRRGF+F SSEIY G NGF+DYGP+G E++ NIK  WW+DM+  RDDMVGLDSSII    VW+ASGH+ GF DPMVDC+ SKLRYRADQL+F  V + +D  VIGY+++L+SG +  EA K AE LK+K  K+G++K  + +K  T+A   E  L+PSPATG+PGSLT PR FNLMF+TSVGA+ D SS A+LRPETAQGIF NFKNV  T RVKVPFGIAQIGKAFRNEITPRN+IFRSREFEQMEIEYFIPP+++ W  F+ +W++ +  WL ++G+   L+ ++VH    LAHYAKACTDIVF+FPFG+ ELQGIAARG+YDL QHQ  SGKS+EYFDE  K RYVPHVIEPSIGVDRLFLAL+CSAY EDEI+GEKR+VLK HP +APIKVG+FPL+KNKPE++  A  IY QL++R+NV +D SGAIGRRYRRMDE GTPF +T+DF+TLE+++VT+R+RD+T+Q R+ +DDLL F    I+G
Sbjct:    2 DTNTRTMPTMDNIVALCKRRGFIFHSSEIYGGINGFFDYGPMGSEMRRNIKNAWWQDMIQERDDMVGLDSSIIMHSNVWKASGHIEGFSDPMVDCKESKLRYRADQLFFAPVSVDDD--VIGYVSVLESGTMQEEADKAAEALKRKLAKQGSLK-AVALKPFTEAKPEEYELVPSPATGKPGSLTAPRDFNLMFETSVGAMRDESSIAYLRPETAQGIFANFKNVVDTTRVKVPFGIAQIGKAFRNEITPRNYIFRSREFEQMEIEYFIPPQDDAWEKFHQEWVDASMAWLVNMGLDPKLLDKEVHSVDKLAHYAKACTDIVFQFPFGKQELQGIAARGNYDLMQHQEHSGKSLEYFDEITKERYVPHVIEPSIGVDRLFLALMCSAYQEDEIDGEKRIVLKLHPRVAPIKVGIFPLLKNKPELVAVAEKIYQQLRKRWNVAYDASGAIGRRYRRMDEVGTPFGVTIDFETLENNTVTLRDRDTTKQERISIDDLLPFLQARIDG 503          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1200317814|gb|OUU38826.1| (glycine--tRNA ligase [Opitutae bacterium TMED56])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 318/496 (64.11%), Postives = 403/496 (81.25%), Query Frame = 0
Query:   87 MEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLE-DDSVTVRERDSTRQTRMKVDDLLAFFDKEIN 581
            +EDIV + KRRGFVFQSSEIY G NGF+DYGPLGVEL+ NIK  WW DMV  RDDMVGLDS II +P+VW+ASGH+ GF DPMVDC+ SK+RYRADQL+  +V ++   E +G++++++S  +  EA + A+ +K+KA  +G +  P+ +K   +  + + AL+PSPATG+PGSLTPPR FN+MF+T VGAL D SS ++LRPETAQGIF NFKNV  TGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPP+E+ WP ++ +WI+T   W +SIG+ ED +G ++H K  LAHYAKACTDI F+FPFG+ EL+GIAARG++DLTQHQ  SGK++EYFDE+ K++Y+PHVIEPS+GVDR FLA++CSAY  DE+EG+KR VL+FHP +APIKVG+FPLVKNKP ++EKAR +Y    RR+NV +D SGAIGRRYRR+DEAG PF +TVDF+T+E D SVT+R RD+T Q RM V++  +  D+E+N
Sbjct:    8 LEDIVGLAKRRGFVFQSSEIYGGLNGFFDYGPLGVELRKNIKDAWWEDMVRRRDDMVGLDSGIIMNPKVWQASGHIDGFTDPMVDCKESKMRYRADQLFAAEVLVE--NESLGWVSVIESEKMQSEAEEKADIIKRKASMQGELA-PVVLKAYDELEINQQALVPSPATGQPGSLTPPRDFNMMFETHVGALRDGSSLSYLRPETAQGIFANFKNVIDTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPDEDQWPKYHAEWIKTRMDWFSSIGLSEDCLGEEIHPKNKLAHYAKACTDITFKFPFGEHELEGIAARGNFDLTQHQQYSGKNLEYFDESTKQKYLPHVIEPSLGVDRTFLAVLCSAYTIDEVEGDKRTVLRFHPRVAPIKVGIFPLVKNKPPLVEKARQVYQMFMRRWNVIYDQSGAIGRRYRRIDEAGVPFGLTVDFETIEGDGSVTLRNRDTTEQVRMSVEEAFSTIDQEVN 500          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|495375864|ref|WP_008100576.1| (glycine--tRNA ligase [Verrucomicrobiae bacterium DG1235] >gi|198258349|gb|EDY82657.1| glycyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235])

HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0
Identity = 324/505 (64.16%), Postives = 407/505 (80.59%), Query Frame = 0
Query:   78 EDTTVSTYNMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDD--SVTVRERDSTRQTRMKVDDLLAFFDKEI 580
            +D    +  M+ IV +CKRRGF+FQSSEIY G+NGF+D+GPLG E+K NIK  WW+DMVH R+D+VGLDSSII  P++W ASGHV GF DPMVDC+ SK+RYRADQL+F  V++   GE IGY+++L+ G +  EA + A+KLK+KA  +G ++ P+ +K    A  +E  LIPSPATGEPGSLT PR FNLMF+T VGAL+D S+TA+LRPETAQGIF N+KNV  TGRVK+PFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFI P+ + W + +  WI+  W WL SIG+ E+++G+DVH K  LAHYAKACTDI F+FPFG+ EL GIAARGD+DL+QHQ  SGKSME FDEA+K+++VPHVIEPS+GVDRLFLA++ +AY EDE+ GEKR ++KFHP +AP KV V PLVKNKPE++E A  +Y +L+RRYNVFWD SGAIGRRYRR DE GTP+C+TVDFDT+E +  + T+R+RD+T Q R+   +LLAF D+++
Sbjct:    3 KDKASKSNPMDPIVALCKRRGFIFQSSEIYGGYNGFFDFGPLGSEIKKNIKDAWWKDMVHRREDVVGLDSSIIMHPKIWVASGHVGGFSDPMVDCKESKMRYRADQLFFAPVKVA--GETIGYVSVLEDGAMQAEAEQKADKLKRKAAVQGELE-PIVLKQYVDADPSEYELIPSPATGEPGSLTAPRDFNLMFETKVGALSDNSATAYLRPETAQGIFANYKNVVDTGRVKIPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFISPDVD-WSEAHQDWIKYCWNWLISIGLPEEMLGKDVHEK--LAHYAKACTDITFKFPFGEQELWGIAARGDFDLSQHQEHSGKSMEIFDEASKKKFVPHVIEPSLGVDRLFLAILGAAYTEDEVGGEKRSLMKFHPRIAPYKVAVLPLVKNKPELVEIAEKLYKKLQRRYNVFWDQSGAIGRRYRRQDEIGTPWCVTVDFDTIEKEGQTFTLRDRDTTEQRRVNEAELLAFLDEQL 501          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1200504129|gb|OUW18004.1| (glycine--tRNA ligase [Opitutales bacterium TMED158])

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 317/496 (63.91%), Postives = 402/496 (81.05%), Query Frame = 0
Query:   86 NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDD-SVTVRERDSTRQTRMKVDDLLAFFDKEI 580
             M+ IV +CKRRGF+FQSSEIY G+NGF+DYGPLG ELK NIK  WW+DMV  RDD+ GLDSSII SP++W ASGHV GF DPMVDC+VSK+RYRADQL++  V +  DG +IGY+++L+ G +  EA   A K+K+K G++G +  P+++KD T+A  +E  LIPSPATGEPGSLTPPR FNLMF+T VGAL+D+S+TA+LRPETAQGIF N+KNV  TGRVK+PFGIAQIGKAFRNEITP+NFIFRSREFEQMEIEYFI P+ + W   + +WI+T  QWL S+G+  +L+G DVH    L+HY+K  TD+ F FPFG+ EL GIA RG++DLTQH   SGK ME FDEA K +YVPHVIEPS+GVDR+ LA++ +AY EDE+ GEKR +LKF+P +AP KV V PL+KNKPE++E+AR IYD+L+R++N FWDVSGAIGRRYRRMDE GTP+C+T+DFDT+E D +VT+R+RD+T Q R+  ++L AF D+++
Sbjct:   11 QMDAIVALCKRRGFIFQSSEIYGGYNGFFDYGPLGSELKKNIKDAWWKDMVQRRDDIEGLDSSIIMSPKIWVASGHVGGFSDPMVDCKVSKMRYRADQLFYAPVTV--DGSIIGYVSVLEDGSMQTEAETAANKMKRKGGRQGELG-PIELKDYTEADPSEYELIPSPATGEPGSLTPPREFNLMFETKVGALSDSSATAYLRPETAQGIFANYKNVVDTGRVKIPFGIAQIGKAFRNEITPKNFIFRSREFEQMEIEYFIAPDAD-WEAIHREWIDTCKQWLVSVGIDAELVGEDVHPLEKLSHYSKGTTDLTFHFPFGEQELWGIACRGNFDLTQHAEHSGKPMEIFDEATKTKYVPHVIEPSLGVDRVLLAILTAAYCEDEVGGEKRSLLKFNPRIAPYKVAVLPLLKNKPELVERARGIYDKLQRKFNCFWDVSGAIGRRYRRMDEIGTPWCVTIDFDTIEKDGTVTLRDRDTTEQKRVSEEELFAFLDEQL 502          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1200526314|gb|OUW39288.1| (glycine--tRNA ligase [Opitutae bacterium TMED175])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 318/496 (64.11%), Postives = 406/496 (81.85%), Query Frame = 0
Query:   87 MEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLE-DDSVTVRERDSTRQTRMKVDDLLAFFDKEIN 581
            +E+IV + KRRGFVFQSSEIY G NGF+DYGPLGVEL+ NIK  WW DMV  RDDMVGLDS II +P+VW+ASGHV GF DPMVDC+ SK+RYRADQL+ ++V++  DGE++G+++L++S ++  +A  +AE +K+KA ++G ++ P+ ++   + +  E  L+PSPATG+PGSLTPPR FN+MF+T VGAL D SS  +LRPETAQGIF NFKNV  TGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPP E+ WP ++ +WI+T   W +SIG+  + +G +VH    LAHYAKACTDI F+FPFG+ EL+GIAARG++DL+QHQ  SGK++EYFDE  K++Y+PHVIEPS+GVDR FLA++CSAY+ DEIEGEKR VL+FHP +APIK G+FPLVKNKP ++E+A+ IY  ++RR+NV +D SGAIGRRYRR+DEAG PF ITVDF+T+E D +VTVR RD+T Q R+ V+  +A  ++EIN
Sbjct:    8 IEEIVALAKRRGFVFQSSEIYGGLNGFFDYGPLGVELRKNIKDAWWEDMVRRRDDMVGLDSGIIMNPKVWQASGHVDGFTDPMVDCKESKMRYRADQLFASEVKV--DGEILGWVSLIESENMQEDAESMAESMKRKAAQQGLLE-PVHLRAYDELSPEEQELVPSPATGKPGSLTPPRDFNMMFETHVGALRDGSSLCYLRPETAQGIFANFKNVVDTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPGEDQWPKYHAEWIKTRKDWFSSIGLTPEYLGEEVHPDHKLAHYAKACTDITFKFPFGEHELEGIAARGNFDLSQHQEHSGKNLEYFDEEMKQKYLPHVIEPSLGVDRTFLAVLCSAYSVDEIEGEKRTVLRFHPRVAPIKAGIFPLVKNKPVLVERAQEIYKLMQRRWNVIYDQSGAIGRRYRRIDEAGVPFGITVDFETIEGDGTVTVRNRDTTDQKRLSVEQAIAMIEEEIN 500          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1200361751|gb|OUU81155.1| (glycine--tRNA ligase [Verrucomicrobia bacterium TMED71])

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 312/496 (62.90%), Postives = 405/496 (81.65%), Query Frame = 0
Query:   86 NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDD-SVTVRERDSTRQTRMKVDDLLAFFDKEI 580
             M+ IV +CKRRGF+FQSSEIY G+NGF+D+GPLGVELK NIK  WW+DMVH RDD+ GLDSSII SP++WEASGHV GF DPMVDC+VSK+RYRADQL+F+ V +  DGE IGY+++++ G +   A+  AEK+K+K G +G +  P+++KD T+A  ++  LIPSPATGEPGSLTPPR FNLMF+T VGAL+D+++ A+LRPETAQGIF N+KNV  TGRVK+PFGIAQIGKAFRNEITPRNFIFRSREFEQME+EYFI PE + W   + +WI+    WL S+G+ E+++G DVH +  L+HY++  TDI FRFPFG+ EL GIA RG++DLTQHQ  SGKSME FDEA K +Y+PHV+EPS+GVDR+ LA++ +AY EDEI GE+R  +KFHP +AP K+ V PL+ NKPE++++AR +Y +L+R++N FWD SGAIGRRYRRMDE GTP+C+T+DFDT+E D +VT+R+RD+T Q R+  ++LLAF D+++
Sbjct:   11 QMDAIVALCKRRGFIFQSSEIYGGYNGFFDFGPLGVELKQNIKDAWWQDMVHRRDDIEGLDSSIIMSPKIWEASGHVGGFSDPMVDCKVSKMRYRADQLFFSPVVV--DGENIGYVSVIEDGYMEATAQAAAEKMKRKQGVQGXLA-PIELKDYTEADPSQYELIPSPATGEPGSLTPPRDFNLMFETKVGALSDSTAIAYLRPETAQGIFANYKNVVDTGRVKIPFGIAQIGKAFRNEITPRNFIFRSREFEQMEMEYFIAPEAD-WKSAHREWIDWCKNWLVSVGLPEEMLGEDVHPQEKLSHYSRGTTDITFRFPFGEQELWGIACRGNFDLTQHQEYSGKSMEIFDEAAKAKYIPHVVEPSLGVDRVLLAILTAAYTEDEIGGERRSXMKFHPRVAPYKIAVLPLLXNKPELVDRARTLYGKLQRKFNAFWDASGAIGRRYRRMDEIGTPWCVTIDFDTVEKDGTVTLRDRDTTEQKRVTEEELLAFLDEQL 502          
BLAST of EWM27167.1 vs. NCBI_GenBank
Match: gi|1088660367|gb|OHE72535.1| (glycine--tRNA ligase [Verrucomicrobia bacterium GWC2_42_7])

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 317/496 (63.91%), Postives = 405/496 (81.65%), Query Frame = 0
Query:   86 NMEDIVNVCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKNNIKQRWWRDMVHSRDDMVGLDSSIIASPRVWEASGHVAGFVDPMVDCRVSKLRYRADQLYFTKVELQEDGEVIGYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVWPDFYNKWIETAWQWLTSIGMREDLMGRDVHLKGDLAHYAKACTDIVFRFPFGQVELQGIAARGDYDLTQHQTSSGKSMEYFDEANKRRYVPHVIEPSIGVDRLFLALICSAYAEDEIEGEKRVVLKFHPSMAPIKVGVFPLVKNKPEIMEKARAIYDQLKRRYNVFWDVSGAIGRRYRRMDEAGTPFCITVDFDTLEDDSVTVRERDSTRQTRMKVDDLLAFFDKEIN 581
            +ME IV++CKRRGF+FQSSEIY G NGF+DYGPLGVEL+ NIK  WW D+VH R+D+VG+D SII  P+VW+ASGH+ GF DPMVDC+ SKLRYRADQL+F +V +   GE IGYI+LL++G++  EA + A+ LK+K GK+G ++  + +K  T+A   E  LIPSP TG+ GSLTPPR FNLMFQT +GAL D S+ A+LRPETAQG+F NF+NV  T RVKVPFGIAQ+G++FRNEITPRNF+FRSREFEQME+EYFI P+ + W   +  WIE+   W  SIG+RE+L+G DVH K  LAHY++ACTDI F++PFG  EL+GIAARG +DLTQHQ +SGKS+EYFDE  K +Y+PHVIEP++GVDR+FLA++CSAY EDEIEGEKR VL+FHP MAPIKVGVFPLVKNKPE++EK+R +Y +L+RR+ V +D +GAIGRRYRRMDE GTPF +T+D++TLE+ +VT+R+RD+T+Q R+   +L  F D++IN
Sbjct:   11 SMETIVSLCKRRGFIFQSSEIYGGCNGFFDYGPLGVELRKNIKDAWWHDIVHCREDVVGIDCSIIMHPKVWQASGHIGGFSDPMVDCKESKLRYRADQLFFGEVIVA--GENIGYISLLENGNMQTEADEKADSLKRKLGKQGLLE-KVVLKPYTEAKPHEYILIPSPGTGKAGSLTPPRDFNLMFQTYIGALRDESAIAYLRPETAQGMFVNFRNVVDTSRVKVPFGIAQMGRSFRNEITPRNFVFRSREFEQMEMEYFIAPDAD-WEKLHADWIESRLNWHKSIGLREELLGLDVHPKNKLAHYSRACTDITFKYPFGVQELEGIAARGCFDLTQHQEASGKSLEYFDEEKKAKYLPHVIEPAVGVDRIFLAILCSAYDEDEIEGEKRTVLRFHPRMAPIKVGVFPLVKNKPELVEKSRNLYKKLQRRWPVAYDAAGAIGRRYRRMDEVGTPFGVTIDYETLENGTVTLRDRDTTKQIRLNETELFQFLDEKIN 502          
The following BLAST results are available for this feature:
BLAST of EWM27167.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109347|gb|EWM27167.1|0.000e+0100.00glycyl-trna synthetase [Nannochloropsis gaditana][more]
gi|873230505|emb|CEM10310.1|0.000e+069.20unnamed protein product [Vitrella brassicaformis C... [more]
gi|922887354|gb|KOO52976.1|0.000e+069.36glycyl-tRNA synthetase [Chrysochromulina sp. CCMP2... [more]
gi|1101101469|gb|OIO60394.1|0.000e+065.35glycine--tRNA ligase [Verrucomicrobia bacterium CG... [more]
gi|1200317814|gb|OUU38826.1|0.000e+064.11glycine--tRNA ligase [Opitutae bacterium TMED56][more]
gi|495375864|ref|WP_008100576.1|0.000e+064.16glycine--tRNA ligase [Verrucomicrobiae bacterium D... [more]
gi|1200504129|gb|OUW18004.1|0.000e+063.91glycine--tRNA ligase [Opitutales bacterium TMED158... [more]
gi|1200526314|gb|OUW39288.1|0.000e+064.11glycine--tRNA ligase [Opitutae bacterium TMED175][more]
gi|1200361751|gb|OUU81155.1|0.000e+062.90glycine--tRNA ligase [Verrucomicrobia bacterium TM... [more]
gi|1088660367|gb|OHE72535.1|0.000e+063.91glycine--tRNA ligase [Verrucomicrobia bacterium GW... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3467rna3467Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications