EWM27234.1, cds3436 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|585109415|gb|EWM27234.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 1794.25 bits (4646), Expect = 0.000e+0 Identity = 872/872 (100.00%), Postives = 872/872 (100.00%), Query Frame = 0 Query: 1 MPLAKVVIESVCSLSRPVSPKVSSAATAAVHAPKPTTYPLLSTGSACTPAQTMAYPMPPGYPHMPIGMPPSYAPLPPPPPGPPGHYQHHMPPIPRQDPGVTSVGMTSVCAGGGHSIGTKNGSSDGYGQSYQMIRTGSDESGLTTTTMGSSSTSSSSSTTSSQQQRKRMRLTSEERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEADEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAGNQPGRSHPPQPSHHLPPHPQLAQSFAQFPSNGQALYPAAPVPQGGASGEGSSVASSSTTFSSASSQATGSISMTTGKTPEGNSHHSGNGRAPRPEGARVGQEGGSQGSEQEGLGDEDEDDDEVEEEEEEDERAYKAPKQVSPRWSEVPPSQVGEHWATSRPHLAAPSHQSGLRSVPPYPLSFPPTSAGTTQNGAPTDVGTEYKVEGSSMMRAIAPMGVLSAPTADDESRCRSPLRQQPPMPSIPIQAGAESCDVLEAGSGRKGETKPEPPSMQATKGLESDKERVTLCHPLQHICSQIQHIHSGGQGSGQREVGRQSVFQYHQHNLLAFRGENWIKRRCEISCARRKVGIWNNPKERNVKIGEKRGKFDRIGGLRKSPVDLQGWIGQSEIVCDRVILLWADECAYVSEGKTFDRRKPTAGIRCQARKRNGRETEFQKYRTRSSFLRAFCFIASSLPGQGTGTLRRRATH 872 MPLAKVVIESVCSLSRPVSPKVSSAATAAVHAPKPTTYPLLSTGSACTPAQTMAYPMPPGYPHMPIGMPPSYAPLPPPPPGPPGHYQHHMPPIPRQDPGVTSVGMTSVCAGGGHSIGTKNGSSDGYGQSYQMIRTGSDESGLTTTTMGSSSTSSSSSTTSSQQQRKRMRLTSEERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEADEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAGNQPGRSHPPQPSHHLPPHPQLAQSFAQFPSNGQALYPAAPVPQGGASGEGSSVASSSTTFSSASSQATGSISMTTGKTPEGNSHHSGNGRAPRPEGARVGQEGGSQGSEQEGLGDEDEDDDEVEEEEEEDERAYKAPKQVSPRWSEVPPSQVGEHWATSRPHLAAPSHQSGLRSVPPYPLSFPPTSAGTTQNGAPTDVGTEYKVEGSSMMRAIAPMGVLSAPTADDESRCRSPLRQQPPMPSIPIQAGAESCDVLEAGSGRKGETKPEPPSMQATKGLESDKERVTLCHPLQHICSQIQHIHSGGQGSGQREVGRQSVFQYHQHNLLAFRGENWIKRRCEISCARRKVGIWNNPKERNVKIGEKRGKFDRIGGLRKSPVDLQGWIGQSEIVCDRVILLWADECAYVSEGKTFDRRKPTAGIRCQARKRNGRETEFQKYRTRSSFLRAFCFIASSLPGQGTGTLRRRATH Sbjct: 1 MPLAKVVIESVCSLSRPVSPKVSSAATAAVHAPKPTTYPLLSTGSACTPAQTMAYPMPPGYPHMPIGMPPSYAPLPPPPPGPPGHYQHHMPPIPRQDPGVTSVGMTSVCAGGGHSIGTKNGSSDGYGQSYQMIRTGSDESGLTTTTMGSSSTSSSSSTTSSQQQRKRMRLTSEERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEADEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAGNQPGRSHPPQPSHHLPPHPQLAQSFAQFPSNGQALYPAAPVPQGGASGEGSSVASSSTTFSSASSQATGSISMTTGKTPEGNSHHSGNGRAPRPEGARVGQEGGSQGSEQEGLGDEDEDDDEVEEEEEEDERAYKAPKQVSPRWSEVPPSQVGEHWATSRPHLAAPSHQSGLRSVPPYPLSFPPTSAGTTQNGAPTDVGTEYKVEGSSMMRAIAPMGVLSAPTADDESRCRSPLRQQPPMPSIPIQAGAESCDVLEAGSGRKGETKPEPPSMQATKGLESDKERVTLCHPLQHICSQIQHIHSGGQGSGQREVGRQSVFQYHQHNLLAFRGENWIKRRCEISCARRKVGIWNNPKERNVKIGEKRGKFDRIGGLRKSPVDLQGWIGQSEIVCDRVILLWADECAYVSEGKTFDRRKPTAGIRCQARKRNGRETEFQKYRTRSSFLRAFCFIASSLPGQGTGTLRRRATH 872
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|224007783|ref|XP_002292851.1| (hypothetical protein THAPSDRAFT_24189 [Thalassiosira pseudonana CCMP1335] >gi|220971713|gb|EED90047.1| hypothetical protein THAPSDRAFT_24189 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 117.087 bits (292), Expect = 6.140e-24 Identity = 86/255 (33.73%), Postives = 125/255 (49.02%), Query Frame = 0 Query: 169 RLTSEERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYE--------EAQSRAASESGLMDDSSSLGD---ADEADEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAGNQPGRSHPP 412 + +S ERLQRSRERNR+HARKTR+RKK M+ +Q + L+ E R++ A+ E TANIL+ + E GA++G L V+S ++R+ + +K E + S+ +E +D SL + D D G R C +P + ++IRRERNR+HAKRTRDR++ FMEE E ++ +L EN L+ + I D PVA + SH P Sbjct: 123 KTSSTERLQRSRERNRMHARKTRQRKKEHMQKLQNRADELKLEQVRLKQAINEKNTANILVGLFQSEE-----------------------------------GADNGALMMDPVVESLMKRSTEEIPDASKIPELPALILPGQHSSKKKAEGSDVDGGESLPEDMQEDGIDYALLGKDRAAC--SPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEDENALLQDHIIKINADQPPVASSSASTSHLP 340
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|219117437|ref|XP_002179513.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409404|gb|EEC49336.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.457 bits (267), Expect = 9.226e-21 Identity = 85/254 (33.46%), Postives = 133/254 (52.36%), Query Frame = 0 Query: 142 LTTTTMGSSSTSSSSSTTSSQQQRKRMRLTSEERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSA---PAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEE-AQSRAASESGLMDDSSSLGDADEADEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQML 391 +TTT + T++S+ + SS + + +++R+QRSRERNR+HARKTR+RKK QM+S++ +L+ E R++ + E TANIL+ L S+ + +PN P+ + S P S + L+ ++ VAA+ ++ + AS S + D + D D D G R +C PE+ ++IRRERNR+HAKRTRDR++ F EE ++ L +EN LR L Sbjct: 86 MTTTADPNIVTAASTESVSSSPKWLPKKADTDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRATDLKHEQIRLKQIINEKNTANILV-----------GLFSKGQSQSPNEDPRVEALMYRSVEEIPDPSKIPELPALILPGQHASKKIKVAVPVVAASPQSMSDGGGEEVASTSDVSGDEQQVPD-DGIDYDLLGKDRSKC--TPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEMCRILEEENHLLRVHL 325
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|1210517567|dbj|GAX23482.1| (hypothetical protein FisN_14Hh348 [Fistulifera solaris]) HSP 1 Score: 98.2117 bits (243), Expect = 1.615e-18 Identity = 80/229 (34.93%), Postives = 112/229 (48.91%), Query Frame = 0 Query: 179 SRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANIL--LVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEADEG----KAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPV 401 SRERNR+HARKTR+RKK QM+S+Q E+L+ E R+R + E TA+IL L + P + A E N +P P S + L+ L +A+ N KA +E+ ADE ++G G R +C +PE+ +RIRRERNR+HAKRTRDR++ F E+ ++ +L EN+ L L I DH V Sbjct: 11 SRERNRIHARKTRQRKKEQMQSLQSRAEDLKREQLRLRQIINEKNTASILVGLFAKSPINVQSSAEDPEVEN--------LLKRPVDEIPDASKVSELPALI---------LPGQHAS--KNAKALQEST------------------ADETEDGIDYELLGKDRSKC--SPEELDRIRRERNRMHAKRTRDRKRLFTEQMSEICRQLEDENDALLDYLTKIDPDHNFV 200
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|298708217|emb|CBJ30556.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.8037 bits (203), Expect = 1.070e-12 Identity = 74/218 (33.94%), Postives = 111/218 (50.92%), Query Frame = 0 Query: 174 ERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMR-GPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEA---DEGKAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEEL 387 +R R+RERNR+HARKTR+RKK ++ +Q+ I L++E +R+ T+ TA +LL + P+ +E S+ P+ S P K + PA S G + + E ++E+A + E MD S GD +EA GK GG K DR +RRERNR+HAKRTR+R+K F+E ++ ++ EN +L Sbjct: 82 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGSQHPS--SRSSPALKLPKAAATPAASRSSKGSG--------RDWGEEV--------ASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKGGGGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQL 281
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|1210514210|dbj|GAX26992.1| (hypothetical protein FisN_9Lh300 [Fistulifera solaris]) HSP 1 Score: 72.4034 bits (176), Expect = 6.665e-10 Identity = 76/280 (27.14%), Postives = 119/280 (42.50%), Query Frame = 0 Query: 173 EERLQRSRERNRVHARKTRKRKKVQMESIQVTIENLQEEGRRMRLAVTEWYTANILLVMRGPEAEKEEALKSEAPNHAPNSGPQCKGQPPGSAPAGSTMGANDGLLSKYMTVQSFLERTNAAVAANNKAYEEAQSRAASESGLMDDSSSLGDADEAD--EGKAGGARGRCK-YAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAGNQPGRSHPPQPSHHLPPHPQLAQSFAQFPSNGQALYPAAPVPQGGA 449 E+RL +SRERNR HAR+TR RKK +E++Q + L+ E + ++ + E A+ILL M E E P + ++TV + +R V +N+ + + + + L + LG + G +G K E +++RRERNR+HAK TRDR+K F+ EK + L + + +R+ L + V+G P S PS P L+ Q P + + Y P P A Sbjct: 76 EQRLAKSRERNREHARRTRIRKKEHLEALQSKVRELEAERKNLKQKMEECNIASILLGMSSNEEE-----------------------PHNDVDVDMFRSKKERKNETHVTVLTEGKRKRFFVESNDYQFSSKSMKVSIDGEL----TILGGGCHVNWKTGVYSDNKGFHKTLTNEQLQKLRRERNRMHAKLTRDRKKCFISVLEKTVEDLEMDIQTIRETLARV-----SVSGMAPT-SQIVTPSRSPIVSPTLSH---QEPEDDVSAYSMDPQPTSAA 319
BLAST of EWM27234.1 vs. NCBI_GenBank
Match: gi|1210527655|dbj|GAX13641.1| (hypothetical protein FisN_14Lh348 [Fistulifera solaris]) HSP 1 Score: 65.0846 bits (157), Expect = 1.455e-7 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0 Query: 325 ADEADEG----KAGGARGRCKYAPEDRERIRRERNRIHAKRTRDRRKRFMEESEKVMTRLLKENEELRQMLDLIYGDHAPVAG 403 ADE ++G G R +C +PE+ +RIRRERNR+HAKRTRDR++ F E+ ++ +L EN+ L L I DH V+ Sbjct: 93 ADETEDGIDYELLGKDRSQC--SPEELDRIRRERNRMHAKRTRDRKRLFTEQMSEICRQLEDENDALLDYLTKIDPDHNFVSS 173 The following BLAST results are available for this feature:
BLAST of EWM27234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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