EWM27256.1, cds3433 (CDS) Nannochloropsis gaditana

Overview
NameEWM27256.1
Unique Namecds3433
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:427040..428215 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27256.1
Productphosphatidic acid phosphatase
Orig transcript idgnl|cribi|Naga_100038g41.7711.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:427040..428215 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000326P_Acid_Pase_2/haloperoxidase
Homology
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|585109437|gb|EWM27256.1| (phosphatidic acid phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 795.808 bits (2054), Expect = 0.000e+0
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0
Query:    1 MSSHMPVCRGDPEAGVVPAGGTVGNEEMAGRENGGSGMYRLAEDVDGNGRDEGCQWVPPALRTSLERYRWLEIILLSVIVILAKEGFGSGVKNHRQYIPLVTQVLPGGAVVVLGNATAFSYPVRFREGTLECPPVTLEFCATSPESALADPCCEFMTTGAKPFQTVSHDDLIWITVGLPLILLVLRHLLLKWYLCSVPASSADPMFSSEDKSALRPLSGLPFGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVPAGGLEVRANPPLKYL 391
            MSSHMPVCRGDPEAGVVPAGGTVGNEEMAGRENGGSGMYRLAEDVDGNGRDEGCQWVPPALRTSLERYRWLEIILLSVIVILAKEGFGSGVKNHRQYIPLVTQVLPGGAVVVLGNATAFSYPVRFREGTLECPPVTLEFCATSPESALADPCCEFMTTGAKPFQTVSHDDLIWITVGLPLILLVLRHLLLKWYLCSVPASSADPMFSSEDKSALRPLSGLPFGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVPAGGLEVRANPPLKYL
Sbjct:    1 MSSHMPVCRGDPEAGVVPAGGTVGNEEMAGRENGGSGMYRLAEDVDGNGRDEGCQWVPPALRTSLERYRWLEIILLSVIVILAKEGFGSGVKNHRQYIPLVTQVLPGGAVVVLGNATAFSYPVRFREGTLECPPVTLEFCATSPESALADPCCEFMTTGAKPFQTVSHDDLIWITVGLPLILLVLRHLLLKWYLCSVPASSADPMFSSEDKSALRPLSGLPFGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVPAGGLEVRANPPLKYL 391          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|298714231|emb|CBJ27367.1| (phosphatidic acid phosphatase [Ectocarpus siliculosus])

HSP 1 Score: 100.523 bits (249), Expect = 4.121e-20
Identity = 66/230 (28.70%), Postives = 106/230 (46.09%), Query Frame = 0
Query:  128 GTLECPPVTLEFCATSPESALADPCCEFMTTGAKPFQTVSHDDLIWITVGLPLILLVLRHLLLKWYLCSVPASSADPMFSSEDKSALRPLSGLPFGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAV 357
            G   C    L  CA   ES     CC+ M  G  P +TV    L ++   +P   + +R +L K  L                             Y     L DV++GL F L L+   T+++K +  +PRPN+ ALR  A +    S  +     + +++PSGHSSMSMA   +++LV   DL +FA   +   R+ L  L++ P+ ++++V  +R+ D++H   D V
Sbjct:   67 GAEWCTASDLSSCAIQSESG----CCKGMQAGKSPHETVDEFQLWFVYFVIPAAFVAVRQVLAKLGL-----------------------------YRGAASLADVILGLVFCLGLSVTLTDAIKFMVGRPRPNYAALR--ALVEHGGSNVMSLKAKSIRSFPSGHSSMSMAGMFYVTLVCWGDLSRFAAENKSWRRSLLAYLSICPILISIYVGVSRIRDFWHFQDDVV 261          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|471208558|ref|XP_004260874.1| (phosphatidic acid phosphatase type 2 domain containing protein 1B, putative [Entamoeba invadens IP1] >gi|440301717|gb|ELP94103.1| phosphatidic acid phosphatase type 2 domain containing protein 1B, putative [Entamoeba invadens IP1])

HSP 1 Score: 78.5666 bits (192), Expect = 4.130e-13
Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 0
Query:  230 LRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAF 371
            L  VLI  +FS AL    TN  K+   +PRPN +A+        D+         A+K++PSGHSSM+  +  FLSL+L  + + F+G     L+   V++ + P+ LA FVA TR  DYFH   D + G  +G + + + +
Sbjct:   89 LITVLICFWFSFALNEFLTNIFKLFAGRPRPNFYAVY-------DAGDQ----ADAYKSFPSGHSSMTFCAMMFLSLLLCGEFKVFSGS-GSLLK---VVMCISPLILAGFVALTRTRDYFHNFDDILGGVLIGSIISFICY 215          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|1091415890|gb|OHS97781.1| (PAP2 superfamily protein [Tritrichomonas foetus])

HSP 1 Score: 78.1814 bits (191), Expect = 7.977e-13
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 0
Query:  235 IGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAF 371
            I L  +L +T   T +LK+  ++PRPN+F    F   S   +    Y + A  ++PSGH+S+S  +  + SL  L+    F+G L        +++   P  +A+F++ TR+ DY H  +D ++G+ LG+  AVL F
Sbjct:  101 ISLAQTLCITLLITEALKVFVARPRPNYFHYCGFNKESKRCTGPESYQKDAKVSFPSGHASISFCATTWFSL-FLQQFFNFSGELW------FILIRFTPTVIAIFISATRITDYMHHVSDVISGAVLGMGIAVLIF 230          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|391339550|ref|XP_003744111.1| (PREDICTED: phospholipid phosphatase 5 [Galendromus occidentalis])

HSP 1 Score: 76.6406 bits (187), Expect = 3.882e-12
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 0
Query:  235 IGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFAS----LSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVPA 377
            +G   +L L+   T+SLK++  +PRP+ F  R F S     S   + +        K++PSGHSS++ +S  FLSL LL  L        R+LR   V+L   P+Y A+ +A +R  DY H   D + GS +GL+   L + Q  P+
Sbjct:   96 MGYILALGLSAILTDSLKVIVGRPRPDFF-FRCFPSGEGNFSMPCTGSPRSVREGRKSFPSGHSSIAFSSFTFLSLYLLAKLEAL-NSTSRRLRTHRVLLGGLPLYAALLIALSRTCDYHHHWQDVLVGSIIGLVIGYLCYRQQYPS 240          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|1205939087|ref|XP_021310705.1| (lipid phosphate phosphatase 2 isoform X1 [Sorghum bicolor] >gi|992273131|gb|KXG33171.1| hypothetical protein SORBI_3003G265100 [Sorghum bicolor])

HSP 1 Score: 77.0258 bits (188), Expect = 5.749e-12
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0
Query:  222 FGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPD----SSAAIHYAESA-----WKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVP 376
            F     + L   ++GL FS+ +T   T+++K    +PRP+ F  R F    PD    ++ AI + E++      K++PSGHSS S A   FLS  L   ++ F     R+     + + L P+ LA  VA +RV DY+H   D  TG  LGL  A + + Q  P
Sbjct:  137 FKKRNVYDLHHGILGLLFSVLITAVLTDAIKDGVGRPRPDFF-WRCFPDGIPDYNNFTTGAICHGEASVIKEGHKSFPSGHSSWSFAGLGFLSWYLAGKIKVF----DRKGHVAKLCIVLSPLLLAALVAVSRVDDYWHHWQDVCTGGLLGLTVASICYLQFFP 295          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|1205939089|ref|XP_021310706.1| (lipid phosphate phosphatase 2 isoform X2 [Sorghum bicolor] >gi|1205939091|ref|XP_021310707.1| lipid phosphate phosphatase 2 isoform X2 [Sorghum bicolor] >gi|992273130|gb|KXG33170.1| hypothetical protein SORBI_3003G265100 [Sorghum bicolor] >gi|1174560967|gb|EES03471.2| hypothetical protein SORBI_3003G265100 [Sorghum bicolor])

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-12
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0
Query:  222 FGYSATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPD----SSAAIHYAESA-----WKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVP 376
            F     + L   ++GL FS+ +T   T+++K    +PRP+ F  R F    PD    ++ AI + E++      K++PSGHSS S A   FLS  L   ++ F     R+     + + L P+ LA  VA +RV DY+H   D  TG  LGL  A + + Q  P
Sbjct:   94 FKKRNVYDLHHGILGLLFSVLITAVLTDAIKDGVGRPRPDFF-WRCFPDGIPDYNNFTTGAICHGEASVIKEGHKSFPSGHSSWSFAGLGFLSWYLAGKIKVF----DRKGHVAKLCIVLSPLLLAALVAVSRVDDYWHHWQDVCTGGLLGLTVASICYLQFFP 252          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|751061607|gb|KIK96305.1| (hypothetical protein PAXRUDRAFT_826103 [Paxillus rubicundulus Ve08.2h10])

HSP 1 Score: 74.3294 bits (181), Expect = 2.647e-11
Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 0
Query:  235 IGLFFSLALTRATTNSLKMLTSQPRPNHFA-----------LRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVP 376
            +GL+ S+ +T   T  +K+   +PRP+  +           L   +++   +  + H  E  W+++PSGHSSMS A   FL+  L   L  F      +  A    L+L P+ +A FVA +R  DY H   D +TGS LGL+ +  ++ Q  P
Sbjct:   99 LGLWLSITITGTITQFVKVTVGRPRPDVISRCQPIPGSEDPLWGLSTVDICTQTSKHMLEDGWRSFPSGHSSMSFAGLGFLTFYLAGKLHLF----DTRGHASKAWLSLAPIAVASFVAISRTMDYRHHWQDVITGSVLGLVISYFSYRQYYP 247          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|677539580|gb|KFR01202.1| (Phosphatidate phosphatase PPAPDC1B, partial [Nipponia nippon])

HSP 1 Score: 72.7886 bits (177), Expect = 3.097e-11
Identity = 53/155 (34.19%), Postives = 76/155 (49.03%), Query Frame = 0
Query:  231 RDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIH--------YAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFA-GPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVP 376
            R+  +G   +LAL    TN+LK++  +PRP+ F  R F    PD  A                 K++PSGH+S + A  AF +  +   L  FA G   R LR C  +L   P++LA  +A +R  DY H   D + GSA+G + A L + Q  P
Sbjct:   60 REACLGASLALALNGVFTNALKLIVGRPRPDFF-YRCF----PDGRANAELMCTGDPGIVTEGRKSFPSGHASFAFAGLAFSAFYIAGKLHCFAPGRGGRALRLCAFLL---PLFLATLIAVSRTCDYKHHWQDVLVGSAIGFVLAYLCYRQYYP 206          
BLAST of EWM27256.1 vs. NCBI_GenBank
Match: gi|751003590|gb|KIK45701.1| (hypothetical protein CY34DRAFT_77467, partial [Suillus luteus UH-Slu-Lm8-n1])

HSP 1 Score: 73.559 bits (179), Expect = 3.498e-11
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 0
Query:  235 IGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPD-----------SSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVP 376
            +GL  SL++TR  T  +K+   +PRP+  +    A  S D           +       E  W+++PSGHSSMS A   FL+  L   L  F      Q       +++ P+  AMFVA +R  DY H   D VTGS LGLL A  ++ Q  P
Sbjct:   68 LGLTLSLSMTRTITQLVKVTVGRPRPDLISRCQPAPGSTDPLWGLSTVDICTQTVSMILEDGWRSFPSGHSSMSFAGLGFLAFYLAGKLHLF----DTQGHVSKAWISITPLAGAMFVATSRTMDYRHHWQDVVTGSMLGLLLAYFSYRQYYP 216          
The following BLAST results are available for this feature:
BLAST of EWM27256.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109437|gb|EWM27256.1|0.000e+0100.00phosphatidic acid phosphatase [Nannochloropsis gad... [more]
gi|298714231|emb|CBJ27367.1|4.121e-2028.70phosphatidic acid phosphatase [Ectocarpus siliculo... [more]
gi|471208558|ref|XP_004260874.1|4.130e-1335.21phosphatidic acid phosphatase type 2 domain contai... [more]
gi|1091415890|gb|OHS97781.1|7.977e-1332.12PAP2 superfamily protein [Tritrichomonas foetus][more]
gi|391339550|ref|XP_003744111.1|3.882e-1234.69PREDICTED: phospholipid phosphatase 5 [Galendromus... [more]
gi|1205939087|ref|XP_021310705.1|5.749e-1233.54lipid phosphate phosphatase 2 isoform X1 [Sorghum ... [more]
gi|1205939089|ref|XP_021310706.1|8.044e-1233.54lipid phosphate phosphatase 2 isoform X2 [Sorghum ... [more]
gi|751061607|gb|KIK96305.1|2.647e-1131.37hypothetical protein PAXRUDRAFT_826103 [Paxillus r... [more]
gi|677539580|gb|KFR01202.1|3.097e-1134.19Phosphatidate phosphatase PPAPDC1B, partial [Nippo... [more]
gi|751003590|gb|KIK45701.1|3.498e-1134.64hypothetical protein CY34DRAFT_77467, partial [Sui... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3442rna3442Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications