EWM27236.1, cds3426 (CDS) Nannochloropsis gaditana

Overview
NameEWM27236.1
Unique Namecds3426
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:414304..415076 +
Alignment locationCM002461.1:415169..415439 +
Alignment locationCM002461.1:415602..415756 +
Alignment locationCM002461.1:415847..416013 +
Alignment locationCM002461.1:416134..416317 +
Alignment locationCM002461.1:416416..416486 +
Alignment locationCM002461.1:416585..416808 +
Alignment locationCM002461.1:416927..417187 +
Alignment locationCM002461.1:417309..417479 +
Alignment locationCM002461.1:417564..417989 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27236.1
Productcellulose synthase (udp-forming) family gt2
Orig transcript idgnl|cribi|Naga_100038g33.7691.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:414304..415076 +
CM002461.1supercontigCM002461.1:415169..415439 +
CM002461.1supercontigCM002461.1:415602..415756 +
CM002461.1supercontigCM002461.1:415847..416013 +
CM002461.1supercontigCM002461.1:416134..416317 +
CM002461.1supercontigCM002461.1:416416..416486 +
CM002461.1supercontigCM002461.1:416585..416808 +
CM002461.1supercontigCM002461.1:416927..417187 +
CM002461.1supercontigCM002461.1:417309..417479 +
CM002461.1supercontigCM002461.1:417564..417989 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|585109417|gb|EWM27236.1| (cellulose synthase (udp-forming) family gt2 [Nannochloropsis gaditana])

HSP 1 Score: 1863.97 bits (4827), Expect = 0.000e+0
Identity = 900/900 (100.00%), Postives = 900/900 (100.00%), Query Frame = 0
Query:    1 MVRRNTDNNIAMSSPMQETDETEIDADEEGYGCSRIEEVMLEDESERDRAGVLKLSPRNSAPIAPPPGKKRAAPQQSRAAGGSSSLAPSSSSEHNSSHAGKSDNAKEKPGTSAVSAEMMRVAFAGWNEADVGPTDSPVEEDIESADDVQSYRSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMILPTAMRGVKFHGIPSFYLRYAALAVVLVVVAFWQGAGVEDPRAPPSAA 900
            MVRRNTDNNIAMSSPMQETDETEIDADEEGYGCSRIEEVMLEDESERDRAGVLKLSPRNSAPIAPPPGKKRAAPQQSRAAGGSSSLAPSSSSEHNSSHAGKSDNAKEKPGTSAVSAEMMRVAFAGWNEADVGPTDSPVEEDIESADDVQSYRSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMILPTAMRGVKFHGIPSFYLRYAALAVVLVVVAFWQGAGVEDPRAPPSAA
Sbjct:    1 MVRRNTDNNIAMSSPMQETDETEIDADEEGYGCSRIEEVMLEDESERDRAGVLKLSPRNSAPIAPPPGKKRAAPQQSRAAGGSSSLAPSSSSEHNSSHAGKSDNAKEKPGTSAVSAEMMRVAFAGWNEADVGPTDSPVEEDIESADDVQSYRSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMILPTAMRGVKFHGIPSFYLRYAALAVVLVVVAFWQGAGVEDPRAPPSAA 900          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|299472345|emb|CBN77533.1| (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 317.005 bits (811), Expect = 9.966e-88
Identity = 221/725 (30.48%), Postives = 343/725 (47.31%), Query Frame = 0
Query:  153 SSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERA-WSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADS--FIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSK----------------VPRLREDFADV-RS---ILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILG-MARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLL-KARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWA-RGNFRHAGLWVTSVVMLACAISM 851
             +YPDP   K   +    +L A+LN+  G  Y+ WR  RSM                  P++P+   W+           WL F  E+     VW  H  R FPS R  C+MD+LV+ID  +S    VC+++PT GE +  L+ V+L A S  LW   L      R+ V+D++ R EV +   L  R A      RK  T  +         ++   +  +C   F + +     F+D F+  D + +        P +D        R+E    Q  L++                +PRL E F  + RS   I +++Y +R +   P   P AG +N+ +FP  P +  ++G  AR +VVND RH L+TEFLQRT+PYFF+     +  T +  E  DV FVQ   R +  D  D DPL N  ++   + N+ +DGVGG  +   G ++R+D L+ G    G+ VV       ++G   GF      E   TS+E F + +RS YV E  ETL++C  +   +  RV++VF  H+ A ++L++D +G L  +R  T +H++F ++ L   +  A+G   ++L  +++S    TPF T  +E ++FF PY  TA +PT  A+ WK   P+      Q   +T +V    +    L   +R+ C+        V  CP WPL +   LL+ S + T + WA   +F   G+W+      AC + M
Sbjct:  821 GNYPDPARIKHHPTSFWIKLSAVLNVVAGAAYIWWRATRSM------------------PDNPKSVVWN-----------WLFFAGEVILTFGVWTSHLQRSFPSVRDVCSMDDLVEIDSNVSNEATVCIMVPTAGEKMKNLKHVLLGAYSQRLWVSRLPTSSQLRIAVLDEKGRREVSV-TTLVARGA---MGERKSATSWR-RCTVWPRPSSSPPYSRSCAPSFDEPFITPKIFMDYFNQMDALDQYVFGPECHPAFD-----MAVRMENYTGQAKLARASSSSGVPGKKKAAKALPRLEEGFKKLFRSSPNIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFK----LDRRTGKKYEWADVGFVQTPQRFE--DLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALR-GMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRMPTPLHKMFGLDSL-TYYIQAVGGFFIILMPIMFSIFQETPFNTVDLEFVYFFFPYIITATIPTILAVGWKNVNPNRVLTDEQFWLSTCYVQIWAF---ALGVWNRITCANPDNAWNLV--CPVWPLGLLFGLLIVSAINTTVYWAFYLSFDEDGIWIFLASFGACIVVM 1493          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|298705512|emb|CBJ28779.1| (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 297.36 bits (760), Expect = 7.080e-81
Identity = 212/726 (29.20%), Postives = 342/726 (47.11%), Query Frame = 0
Query:  173 IAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYAD--SFIDIFSIADMIHKMC--KDDCIPPEWDGLELPSGTRIEPKQTQT---DLSKV-PRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVK-KADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGK--GLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLG--LLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMILPTAMRGVKFHGIPSFYLRYAALAVVLVVVAFW 885
            I ++N+     YL WR+ RS+            G   I                   + ++   AE    + + +GH+SR FP+ R K  MD+L DID  +     V V+IPT GE   ++ + +   + L LW      R   R++V+D++RR EV  L++L Y  + +  + + VR  L  EG A +S   FY+H+       GQ   D  +FI    +   I K+    DD I      + +   +RI+ +  +    D  ++ P  ++ +   + I T+VY+SR     P   P AG +N  +F  +P +  ++G A  +V+ND RH L  EFLQRT+PYFF    D      ++    ++AF+Q   R   + D  D DPL N+     DI+N GRDG GGA++   G ++R+ VL+ G    G   V +  P   +G+  GLGF      E   TS++LF +G++SVYVN  +E L+ C      +  R ++V   H  A ++ +    G  +L   + T   ++F   D    F  A   E+LL+  ++Y +    PF T  IE   +F P+  T  LPT AAL W++TP     R  Q+ FAT+FV     + +    ++R   S +   +     CP WPLY+  V +  ++     +WA  ++    +WV+ +     A+  + P    G+      +FY R   + VV+ +V+ W
Sbjct: 1334 IGVINLLCMAAYLWWRITRSLK-----------GVDHI------------------IWAFIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGA-LKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVLD-KTVREILMREGVAPISAKGFYEHF--ANGEHGQRMYDDVNFIRGIEVVSEIDKLIAENDDNISRFSPSVAI---SRIKERARRASCFDRKEIQPGQKKVWNRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFNPQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFF--TFDKPRRCYKW---ANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAF-DAVSYFLQAFAGEILLIFPIVYGFTNSAPFNTWNIEFALYFFPFIITGVLPTVAALGWQKTPSAKVMRDEQIWFATSFVQIYAVMHAVWGTITRKDPSNAWECK-----CPVWPLYLHFVAITIAVCFNTADWAARSYEEPWVWVSCIGSALFALHSLWPVVSFGLGVTMPEAFYTRVFGMLVVMTLVSLW 2012          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|298709119|emb|CBJ31065.1| (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 274.633 bits (701), Expect = 6.691e-76
Identity = 202/699 (28.90%), Postives = 326/699 (46.64%), Query Frame = 0
Query:  152 RSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVR----KNARLVVVDDRRRAEVLLLIALCYRFAA--LFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQ---TDLSK------------------------VPRLREDF-ADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFP-EDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGL--LKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTL 813
            R    +PQ ++   S  + + + +LN+  G  Y+ WR  ++ +               + PE             Y W+ W+ F+ E+F + ++WLGH+ R F  +R + TMD++V ID  +     V +++PT GE L+++ + +L A S   WP     +       R++V+D++RR EV +L +  +  +   L  + RK+   L+ EG   ++  AFY+ +     GFG+ +    + +     M+ +M  DD +  + DG +L    R +    Q    D+SK                         P   + F    +    ++Y+SR     P   P AG +N+ +FP +DP    ++G +  +VVND RH LQ EFLQRT PYFF    D +  T +Y+  + VAFVQ   R +K      DPL N      D+INIG+DG+G   +   G ++R++ LK G++  G++ V  +D   L+GK LGF      E   TS+ELF +G+RSVYVNE  E L+ C H+   LT R+++V   H  A ++L    L        + T  HR++   D    +  A+   +LLL  V+Y    + PF T       +F+P+  TA LPT  +  W+        R  Q   +T +V    ++     ++S     R       V   PTWPL +  
Sbjct:   75 RGEKINPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQD---------------VPPE-------------YKWWWWVFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKI---LQAEGVRNLTPLAFYE-WCHEKRGFGKVHIFKDVGLSRAVAMVRQM--DDLVTGD-DGGDLYRLDRNQSFLNQGLDEDISKSKEGDEVEELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFF----DVDAITQQYKWAK-VAFVQTPQRFRK--DLPDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALK-GRSPDGKTGVDPKD-LGLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAF-DQATYYLQAIPGYVLLLMPVVYGVTGQPPFNTDITSYFSYFVPFIVTAVLPTVISAQWRSIDSHRLTRDEQTWLSTTYVQIYAFL-----QVSWTRLIRGNPDHAWVARVPTWPLTLVF 723          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|298709118|emb|CBJ31064.1| (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 189.504 bits (480), Expect = 6.888e-46
Identity = 138/443 (31.15%), Postives = 213/443 (48.08%), Query Frame = 0
Query:  442 RSILTLVYFSRPSNEFPASCPVAGMLNSLLFP-EDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVAD--TEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQL--LGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGL--LKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPL---YMTLVLLLASMVV-----TFINWARGNFRHAGLWVTSVVMLACAISMILPTAMRGVKFHGIPSFY 869
            + + TL+Y+SR +   P   P AG +N+ +FP +DP    + G +  +VVND RH L+  FLQRT+PYFF       T      Y   + VAFVQ   R +   +   DPL N  +   D+IN G+DG+G   +   G ++R++ LK G+   G+ V   +DPT+L  +GK LGF +    E   TS+ELF +G+RSVYVNE  E L+ C H+   LT R+++V   H  A ++L+   +        + T  HRL+   D    +  A+   +LL+  ++Y      PF T   +   +F P+  TA LPTA +  W++       R  Q   +T +V    ++     ++     +R       V   PTWPL   ++  V  +A  V       F+ W    F       + VV+   A+  + P     + +  IPSFY
Sbjct:  571 KGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAK-VAFVQTPQRFRM--ELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALK-GQRPDGKIV---DDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAF-DQATYYLQAIPGYVLLIMPIVYGVTGTPPFVTSLKDYFQYFTPFIVTALLPTAISSQWRKIDSHRLTRDEQTWLSTTYVQIYAFL-----QVVWTGLTRKSPENAWVAKVPTWPLTFVFLGQVFAVAGGVYWVVQKGFVIWYANFF-------SIVVVAGLAMHALWPMVSLSLGW-SIPSFY 992          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|75701515|gb|ABA21191.1| (cellulose synthase catalytic subunit [Anabaena variabilis ATCC 29413])

HSP 1 Score: 78.9518 bits (193), Expect = 2.125e-11
Identity = 102/420 (24.29%), Postives = 177/420 (42.14%), Query Frame = 0
Query:  434 LREDFADVRSILTLVYFSRPSNEFPASCP---VAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFD---TDPLSNRDLILQDIINIGRDGVGGAM-AKSNGCMYRIDVLKSGKNVRGRSVVSEE---DPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEI-DETLSLCFHETPRLTGRVEEVFDIHLSATEVLVR-DPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVP-FVVYIGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVT 840
            +R+   ++  +  L Y +RP    P   P    AG LN  +F  + +   IL +       D  H  + +FL+R +PYF+       +   +YE+ + +AFVQ        D ++   +DP  +R  +    +  G+DG+  A    +N  + R  ++  G          +E   D  QL+G   G S+ +  E + T++ L   G++SVY +E+  E L+        L+  +++         +VLVR +PL      +  R+     M   + GF   + I     C ++Y +   +P  T+GI+ +  FLP +    L    A+ W   P    +RS Q  +A A  P F+  + S              +RQ  +     WP  M L+L +  +V +  N+  G+  H   WV 
Sbjct:  251 IRQKELELVELARLRYIARPK---PVGVPHHAKAGNLNYAIFSGETSGELILTL-------DADHIPKPQFLKRVLPYFY----TYNLFNGKYEQNR-IAFVQTP-----QDFYNIPPSDPFGHRASLFYGPLQQGKDGMNAAFYTGTNAILRREALINVGLQYFADDFTKDEKRLDEFQLVG---GLSSNSITEDMNTAMRLHGAGWKSVYHHELLAEGLA-----PDDLSSTLKQRLRWAQGTIQVLVRENPLSKPGLTFWQRLQYFKTMYSYFSGFATLIFIS----CPIIYFFTEISPVKTYGIDFIVHFLPTFIINRLTFIVAI-WG-IPASEIWRSEQ--YAIALFPVFIQAVWSVFTGQKINFQVTPKQRQSGIYLQMIWPQLMFLLLTIIGIVWSLYNFVIGHLNHP--WVN 632          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|1210113297|dbj|BAY32425.1| (cellulose synthase [Nostoc carneum NIES-2107])

HSP 1 Score: 76.2554 bits (186), Expect = 1.761e-10
Identity = 100/440 (22.73%), Postives = 179/440 (40.68%), Query Frame = 0
Query:  423 QTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAM-AKSNGCMYRIDVLKSGKNVRGRSVVSEE---DPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPR-LTGRVEEVFDIHLSATEVLVR-DPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVY----IGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMI 852
            Q + +L  + RLR             Y +RP     +    AG LN  +F  + A   IL +       D  H  Q +FL+R +PYF+    +  +   +YE+ + +AFVQ           D DP  +R  +    +  G+DG+  A    +N  + R  ++  G          +E   D  +L+G   G S+ +  E + T++ L   G++S+Y +E+     L     P  L+  +++         +VLVR +PL      +  ++H    M   + GF   + I     C ++Y +    P  T G +    F P +    L T  +  W   P    +RS Q  +A A  P ++     + SG A   +V       RQ  +     WP  +  +L +  M+ +   +A G+  +  +++ + V     +S++
Sbjct:  261 QKELELGDLARLR-------------YIARPKQPGVSHHAKAGNLNYAIFSGETAGEFILTL-------DADHIPQPQFLKRVLPYFY----NYNLFGGKYEQNK-IAFVQTPQGFYNLP--DNDPFGHRANLFYGPLQQGKDGMNAAFYTGTNAVLRREALISVGLQYFADEYAKDEKRLDEFELIG---GVSSQSITEDMNTAMRLHSAGWKSIYHHEL-----LAEGLAPEDLSSTLQQRLRWAQGTIQVLVRENPLTKAGLTFWQKLHYFKTMYSYFAGFSTFVFIS----CPIIYFFTGLIPVQTQGYDFALHFFPAFIMNRL-TFLSAAWG-IPAREIWRSEQ--YAIAIFPLLIQAVWSVFSGKAIKFKVTPK---ERQSGIYFKLIWPQLLMFILSILGMLWSLYRFAIGSLDYPWVYLLNGVWATYNLSLL 654          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|1210104013|dbj|BAY23143.1| (cellulose synthase [Calothrix sp. NIES-2100])

HSP 1 Score: 75.0998 bits (183), Expect = 3.136e-10
Identity = 100/426 (23.47%), Postives = 174/426 (40.85%), Query Frame = 0
Query:  440 DVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDT---DPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKS-GKNVRGRSVVSEE---DPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEI-DETLSLCFHETPRLTGRVEEVFDIHLSATEVLVR-DPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVY-IGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHA------GLWVTSVVMLACAI 849
            ++ S+  L Y +RP          AG LN  +F  + +   IL +       D  H  + +FL+R +PYF+    +  +   +YE+ + +AFVQ        D ++    DP  +R  +    +  G+DG+  A       + R + L S G          +E   D  +L+G   G S+ +  E + T++ L   G++SVY +E+  E L+        L+  +++         +VLVR +PL      +  R+H    M   + GF       + + C ++Y +    P  T+G E    F P +    L T     W   P    +RS Q  +A A  P ++  + S ++  S        +RQ  +     WP  +   L +  M+ +   +A GN          G W T  ++L  +I
Sbjct:  259 ELVSLSRLRYIARPKQPGVPHHAKAGNLNYAIFSGETSGEFILTL-------DADHIPKPQFLKRVLPYFY----NYNLFVGQYEQNK-IAFVQTP-----QDFYNIPAGDPFGHRANLFYGPLQQGKDGMNAAFYTGTNAILRREALISVGLQYFVDEYAKDEKRLDEFELIG---GVSSNSITEDMNTAMRLHSAGWQSVYHHELLAEGLA-----PDDLSSTLKQKLRWAQGTIQVLVRENPLSKPGLSFWQRLHYFKTMYSYFSGF----ATVIFICCPIIYFFTGLIPVKTYGYEFALHFFPAFLLNRL-TFLIAGWG-IPAREIWRSEQ--YAIALFPLLIQAVWSVISGRSIKFQVTPKQRQSGIYFQLVWPQLVIFTLTILGMIWSLYRFAIGNLHDPWVHLLNGAWATYNLLLLWSI 651          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|1209846612|dbj|GAX35879.1| (cellulose synthase [Nodularia sp. NIES-3585])

HSP 1 Score: 73.9442 bits (180), Expect = 7.433e-10
Identity = 107/461 (23.21%), Postives = 187/461 (40.56%), Query Frame = 0
Query:  411 LELPSGTRIEPKQT-QTDLSKVPRLREDFA-----DVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDT---DPLSNRDLILQDIINIGRDGVGGAM-AKSNGCMYRIDVLKSGKNVRGRSVVSEE---DPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEI-DETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRD-PLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVY----IGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHAGLWVTSVVMLACAISMI 852
            L++P    I+ K T Q  L+    L E        ++  +  L Y +RP          AG LN  +F  +     IL +       D  H  + +FL+R +PYF          T +YE  + +AFVQ        D ++    DP  +R  +    +  G+DG+  A    +N  + R  ++  G          +E   D  +L+G   G S+ +  E + T++ L   G++SVY NE+  E L+        L+  +++         +VL+RD PL      +  ++     M   + GF       + +LC ++Y +    P  T+G++    F P +    L T  A +W   P    +RS Q  +A A  P ++     + SG     +V      +RQ  +     WP  +  VL +  M+ +F  +A G      +++ +       +S+I
Sbjct:  226 LKIPEKNSIDGKNTIQERLTTERHLLESTIYQKELELVELARLRYIARPKQPGIPHHAKAGNLNYAIFSGETVGDFILTL-------DADHIPKPQFLKRVLPYF----HTYNFSTGKYESNR-IAFVQTP-----QDFYNIPSGDPFGHRASLFYGPLQQGKDGMNAAFYTGTNAVLRREALISIGLQYFADEYAKDEQRLDEFELIG---GVSSNSITEDMNTAMRLHGAGWKSVYHNELLAEGLA-----PDNLSSTLKQRLRWAQGTIQVLIRDNPLTKAGLNFWQKLQYFKTMYSYFSGF----ANFVFILCPIIYFFTGIIPVTTYGLDFALHFFPAFIINRL-TFLAASWG-IPAREIWRSEQ--YAIALFPLLIQAVWSVFSGQPVKFKVTPK---QRQSGIYLRLIWPQLVVFVLTILGMIWSFYRFATGTLNTPWVYLLNGAWAIYNLSLI 650          
BLAST of EWM27236.1 vs. NCBI_GenBank
Match: gi|1197919867|ref|WP_086837324.1| (cellulose synthase [Nostoc sp. RF31Y] >gi|1195995916|gb|OUL18386.1| cellulose synthase [Nostoc sp. RF31Y])

HSP 1 Score: 71.2478 bits (173), Expect = 6.149e-9
Identity = 97/419 (23.15%), Postives = 167/419 (39.86%), Query Frame = 0
Query:  447 LVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDT---DPLSNRDLILQDIINIGRDGVGGAM-AKSNGCMYRIDVLKSGKNVRGRSVVSEE---DPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNE-IDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVR-DPLGLLKARYTTRMHRLFVMEDLWQGFFMAMGIELLLLCAVLYSYLWRTPFYTHGIEVLFFFLPYYFTAALPTAAALNWKRTPPDPAFRSVQLSFATAFVPFVVY-IGSGLAEMSRVVCSRSGRRQFSVEGCPTWPLYMTLVLLLASMVVTFINWARGNFRHA------GLWVTSVVMLACAI 849
            L Y +RP     A    AG LN  +F  + +   IL +       D  H  +  FL+R +PYF+    +  +   +YE+ Q +AFVQ        D ++    DP  +R  +    +  G+DG+  A    +N  + R  ++  G          +E   D  QL+G   G S+ +  E + T++ L   G++SVY +E + E L+        L+  +++         +VLVR +PL      +  R+     M   + GF       + + C ++Y +    P  T+G +    F P +    L T     W   P    +RS Q  FA A  P ++  + S  +           +RQ  +     WP  +   L +  ++ T   +A G+          G W    ++L  +I
Sbjct:  274 LRYIARPKKPGVAHHAKAGNLNYAIFSGETSGEFILTL-------DADHIPKPRFLKRVLPYFY----NYNLFIGKYEQNQ-IAFVQTP-----QDFYNIPPGDPFGHRANLFYGPLQQGKDGMNAAFYTGTNAVLRREALISVGLQYFSDEYTKDEKRLDEFQLIG---GVSSNSITEDMNTAMRLHSAGWKSVYHHELLAEGLA-----PDDLSSTLKQRLRWAQGTIQVLVRENPLNKSGLSFWQRLQYFKTMYSYFSGF----ATVIFICCPIIYFFTGIIPVKTYGNDFALHFFPAFIINRL-TFITAGWG-IPAREIWRSEQ--FAIALFPLLIQAVWSVFSGRQIKFQVTPKQRQSGIYIQLIWPQLLIFTLTILGIIWTLYRFAIGSLNEPWVHLLNGAWAIYNLLLLWSI 659          
The following BLAST results are available for this feature:
BLAST of EWM27236.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109417|gb|EWM27236.1|0.000e+0100.00cellulose synthase (udp-forming) family gt2 [Nanno... [more]
gi|299472345|emb|CBN77533.1|9.966e-8830.48Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
gi|298705512|emb|CBJ28779.1|7.080e-8129.20Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
gi|298709119|emb|CBJ31065.1|6.691e-7628.90Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
gi|298709118|emb|CBJ31064.1|6.888e-4631.15Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
gi|75701515|gb|ABA21191.1|2.125e-1124.29cellulose synthase catalytic subunit [Anabaena var... [more]
gi|1210113297|dbj|BAY32425.1|1.761e-1022.73cellulose synthase [Nostoc carneum NIES-2107][more]
gi|1210104013|dbj|BAY23143.1|3.136e-1023.47cellulose synthase [Calothrix sp. NIES-2100][more]
gi|1209846612|dbj|GAX35879.1|7.433e-1023.21cellulose synthase [Nodularia sp. NIES-3585][more]
gi|1197919867|ref|WP_086837324.1|6.149e-923.15cellulose synthase [Nostoc sp. RF31Y] >gi|11959959... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3435rna3435Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications