EWM27264.1, cds3405 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|585109445|gb|EWM27264.1| (hypothetical protein Naga_100038g7 [Nannochloropsis gaditana]) HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query: 1 MRRLVICSHTVQASNNALRLSSFRTVMRHRTRPRHLSTGSTTTASPATPAPAPPSTSATGAPDMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQGRD 361
MRRLVICSHTVQASNNALRLSSFRTVMRHRTRPRHLSTGSTTTASPATPAPAPPSTSATGAPDMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQGRD
Sbjct: 1 MRRLVICSHTVQASNNALRLSSFRTVMRHRTRPRHLSTGSTTTASPATPAPAPPSTSATGAPDMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQGRD 361
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|953503479|emb|CEG35489.1| (hypothetical protein PHALS_11368 [Plasmopara halstedii]) HSP 1 Score: 119.013 bits (297), Expect = 4.057e-27 Identity = 88/322 (27.33%), Postives = 158/322 (49.07%), Query Frame = 0
Query: 37 STGSTTTASPATPAPAPPSTSATGAPDMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGR-HQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECY 357
ST + T + A + S+ + PPK PG SRN G + L + AY+YR S + ++L++ +E+ I P+E E R +N T + +F++V N + AFP K AS + + L + ++ G++L+RV+L L+ + ++ D+ + A S+++ V+ER+ L + T A G A S + R++ + ++E+L+ L+ T QIP+E V A + YP Q Y+VA+ EL+M A E+A + K ++E+ + + +++ K +C+WGEC+
Sbjct: 30 STAPSATVTAALNSDGSKSSVSVNGSGEEPPKYKPGWFSRNPGVTLGGILLGISAYIYRGSCGKNNFESLRIPIEEAAVISPYEAWELRSSNNITPE--VFEDVRNGVTKAFPSGK-ASMQHFDQYLGFKLAQVCPTGMKKGYHLERVLLSLKTDADRKSDIDAQMVAFSMAVKGTVDERLRMLFNLATNAPAGEALKSIEEEKNNDTREMTQEQMERLLQLLLETCQIPSEKRVLAIEDAKYPIQKYKVATPSELLMSA--------EQAQTNDTK------------IKKEETHNCQMYTFEAFSQIMRGKIVCLWGECF 328
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|325186711|emb|CCA21259.1| (AlNc14C116G6546 [Albugo laibachii Nc14]) HSP 1 Score: 102.834 bits (255), Expect = 4.993e-21 Identity = 87/297 (29.29%), Postives = 137/297 (46.13%), Query Frame = 0
Query: 71 PGIISRN----IGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGR-HQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGS-----SSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECY 357
PG SRN +G I L + YLYR++ N+ + AL+ + I P+E E R N T A F + +++ +FP RK A+ L + A L LQ H+L+RV+ +E + +VD+ FL ALSL++ VE+R+ ++ T AD SS EE + R +E+++ L+ T+QIP+E V + +Y + Y+VAS L ++ A++A + P L + E +S E + K ICVWGEC+
Sbjct: 83 PGFFSRNPAVTLGGIAL----GIGLYLYRNAHNKSKFAALQEPFTEDAVISPYEAWELRSKNNLT--EATFTLLCEDIFRSFPTRK-ATVKELDQFTASKLAEVCPNGLQKAHHLERVLALIEKDASGKVDIDAFLVALSLAVKGAVEDRLRCIYKIATLADASLVTDNISERSSEDDPEEMSDIVSRSSVEKILGLLLLTSQIPSEKRVVQKDQANYFLKDYEVASPCAL---------------LQAAIQANEKQNDNPRLQS-------AESISFEEFSRLFRGKDICVWGECF 350
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|325186710|emb|CCA21258.1| (AlNc14C116G6546 [Albugo laibachii Nc14]) HSP 1 Score: 102.834 bits (255), Expect = 5.197e-21 Identity = 92/320 (28.75%), Postives = 144/320 (45.00%), Query Frame = 0
Query: 54 PSTSATGAPDMSPPKP------SPGIISRN----IGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGR-HQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGS-----SSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECY 357
P +A A S P+ PG SRN +G I L + YLYR++ N+ + AL+ + I P+E E R N T A F + +++ +FP RK A+ L + A L LQ H+L+RV+ +E + +VD+ FL ALSL++ VE+R+ ++ T AD SS EE + R +E+++ L+ T+QIP+E V + +Y + Y+VAS L ++ A++A + P L + E +S E + K ICVWGEC+
Sbjct: 70 PFCTAKTALSTSKPEAEASDDYKPGFFSRNPAVTLGGIAL----GIGLYLYRNAHNKSKFAALQEPFTEDAVISPYEAWELRSKNNLT--EATFTLLCEDIFRSFPTRK-ATVKELDQFTASKLAEVCPNGLQKAHHLERVLALIEKDASGKVDIDAFLVALSLAVKGAVEDRLRCIYKIATLADASLVTDNISERSSEDDPEEMSDIVSRSSVEKILGLLLLTSQIPSEKRVVQKDQANYFLKDYEVASPCAL---------------LQAAIQANEKQNDNPRLQS-------AESISFEEFSRLFRGKDICVWGECF 360
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|325186709|emb|CCA21257.1| (AlNc14C116G6546 [Albugo laibachii Nc14]) HSP 1 Score: 102.834 bits (255), Expect = 5.850e-21 Identity = 92/320 (28.75%), Postives = 144/320 (45.00%), Query Frame = 0
Query: 54 PSTSATGAPDMSPPKP------SPGIISRN----IGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGR-HQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGS-----SSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECY 357
P +A A S P+ PG SRN +G I L + YLYR++ N+ + AL+ + I P+E E R N T A F + +++ +FP RK A+ L + A L LQ H+L+RV+ +E + +VD+ FL ALSL++ VE+R+ ++ T AD SS EE + R +E+++ L+ T+QIP+E V + +Y + Y+VAS L ++ A++A + P L + E +S E + K ICVWGEC+
Sbjct: 78 PFCTAKTALSTSKPEAEASDDYKPGFFSRNPAVTLGGIAL----GIGLYLYRNAHNKSKFAALQEPFTEDAVISPYEAWELRSKNNLT--EATFTLLCEDIFRSFPTRK-ATVKELDQFTASKLAEVCPNGLQKAHHLERVLALIEKDASGKVDIDAFLVALSLAVKGAVEDRLRCIYKIATLADASLVTDNISERSSEDDPEEMSDIVSRSSVEKILGLLLLTSQIPSEKRVVQKDQANYFLKDYEVASPCAL---------------LQAAIQANEKQNDNPRLQS-------AESISFEEFSRLFRGKDICVWGECF 368
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|1214712454|gb|OWZ23396.1| (hypothetical protein PHMEG_0001727 [Phytophthora megakarya]) HSP 1 Score: 101.679 bits (252), Expect = 8.257e-21 Identity = 87/296 (29.39%), Postives = 149/296 (50.34%), Query Frame = 0
Query: 63 DMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRH-QKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECY 357
D PPK PG SRN G + L ++ Y+YR S +K +AL++ + + I P+E E R +N T + F++V + + AFP K A+ + + L + + ++L+RV+L LE ++ ++ DV L A S+++ V+ER+ L + T A G A + S E R++ + +LE+L+ L+ T QIP+E V A + YPFQ Y A+ ++ +KA+ + + K +K +D + + D E S +++ K +CVWGEC+
Sbjct: 48 DEEPPKYKPGWFSRNPGVTLGGILLAIGFYIYRGSRGKKNFEALQIPIAESAVISPYEAWELRSSNNITPE--TFEDVRDGVKRAFPAGK-ATMQHFDQYLGFKLAQACPTGVSKAYHLERVLLSLETDKDRKSDVDAQLVAFSMAVKGAVDERLRILFNLGTNAPAGEALAES---DEVDTREMSQEQLERLLHLLLETYQIPSEKRVLAVDDAKYPFQEYLAATPSDM-LKAAVQAQVKDKKITEDEAR--------------ERDSYTFEAFS-----QLMRGKTVCVWGECF 317
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|698794266|ref|XP_009830162.1| (hypothetical protein H257_06583 [Aphanomyces astaci] >gi|574114751|gb|ETV80238.1| hypothetical protein H257_06583 [Aphanomyces astaci]) HSP 1 Score: 100.523 bits (249), Expect = 1.620e-20 Identity = 94/347 (27.09%), Postives = 157/347 (45.24%), Query Frame = 0
Query: 23 FRTVMR---HR-TRPRHLSTGSTTTASPATPAPAPPSTSATGAPDMSP-----PKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKS--ASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQ 358
FR VMR HR R L++ + + A + + + A ++ P P PG SR+ + L L + Y+YRSS N K+ ++ L ++ I P+E E R N T + +F V + FP ++ A + + V ++ H+L+RV+L L ++DV L A SL++ V+ER+ +L AA GSS+ K ++E ++ ++ T QIP+E V A +++YP+Q Y +A+ +++ + A+ +VKA K GTEQ + + ++ +KAICVWGECY
Sbjct: 6 FRHVMRTQRHRQATSRRLTSDAKAAEAKVAEGKAAETATESKAAEVKAAATETPTPRPGFFSRHPEIVFLAGLVGIGGYIYRSSVNNKKFNEVQNDLAEKTPISPYEAYELRSQNAITPE--VFDAVKKQAKRYFPSNEATVAEFDLCLGSVLQGTA-----MKNTHHLERVLLSLPKNINGKIDVDLLLVAFSLAVKGSVDERLESLFALPLAAKL--TGSSTLTKA----------QVEHVLGHVLDTYQIPSEKRVVALEDKAYPYQEYAIATPGQIL-----------DAAVATSVKA-----KTLDEGTEQ--------FNLDQFALLMKSKAICVWGECYN 309
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|1173950444|gb|OQR98403.1| (aminomethyltransferase [Thraustotheca clavata]) HSP 1 Score: 101.293 bits (251), Expect = 8.980e-20 Identity = 79/292 (27.05%), Postives = 135/292 (46.23%), Query Frame = 0
Query: 64 MSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGE 355
+ P PG SR+ + + +L Y+YR S+N+K +A++ ++DQ I P+E E R N T + +F++V FPG ++ + + + + G K L H+L+RV++ L E +V+V L A SL++ DV++R+ L+ + KI R ++E ++ + T QIPAE V A ++YPFQ Y V + EL+ A++ A+K P + P T + E ++ +K+IC+WGE
Sbjct: 51 IGAPAEQPGFFSRHPEYVFGALILALGGYIYRGSKNRKYFEAIQNEIDDQTPISPYEAYELRSQNEITPE--VFEKVRVAARKFFPGNEATVHDFDLCLGSVLNGMQLKNL---HHLERVLMSLPKNEAGKVNVDLLLVAFSLAVKGDVDQRLKCLYQLQVP--------------QASSNKITRDQIESILDNTLTTFQIPAEKRVVAVDGKTYPFQEYAVGTANELL-----------HAAVQSAIKDKTLPEEAPTQYTLE------------EFNLLMKSKSICIWGE 300
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|1173953851|gb|OQS01364.1| (hypothetical protein ACHHYP_01166 [Achlya hypogyna]) HSP 1 Score: 96.2857 bits (238), Expect = 4.048e-19 Identity = 79/292 (27.05%), Postives = 136/292 (46.58%), Query Frame = 0
Query: 72 GIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLG--HYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGAL-HDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQGR 360
G SR+ + + ++ Y+YR S+N+K +A++ + D I P+E E R N T D ++ +V + FP +++ +R LG +QL H+L+RV++ L ++ + +V T L A SL++ DV +R+ L H V +AD + ++E ++ ++ T Q+P E V A +SYPFQ Y + S EL+ + A++ AVK P PP TE + E ++ +K+IC+WGEC+ +
Sbjct: 47 GFFSRHPEYVFGAVILAIGGYIYRGSKNRKFFEAIQDEIADATPISPYEAFELRSQNDITPD--VYYKVCAQAKRFFPTNEAS-----VRDFDLCLGSVLNGMQLKNLHHLERVLMSLPKDDAGKCNVDTLLVAFSLAVKGDVADRLKCLYHLQVASADT----------------PVTLEQIETILGHVMTTYQVPPEKRVVAVDGKSYPFQEYAIGSAHELL-----------QAAVQAAVKDKSLPEVPP---TE---------FTLDEFNMLMKSKSICIWGECFSNK 292
BLAST of EWM27264.1 vs. NCBI_GenBank
Match: gi|673014030|ref|XP_008860976.1| (hypothetical protein H310_00116 [Aphanomyces invadans] >gi|574482574|gb|ETW09565.1| hypothetical protein H310_00116 [Aphanomyces invadans]) HSP 1 Score: 96.6709 bits (239), Expect = 5.423e-19 Identity = 79/301 (26.25%), Postives = 138/301 (45.85%), Query Frame = 0
Query: 60 GAPDMSPPKPSPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKS--ASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPEEGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDKGVGEGLSARELVEVLSTKAICVWGECYQ 358
G P P PG SR+ L L + Y+YRSS N K+ A++ L ++ I P+E E R N T + +F V + FP ++ A + + V ++ H+L+RV+L L +VDV L A SL++ V+ER+ +L A+ + + + ++E+++ ++ T Q+P+E V A +++YP+Q Y VA+ ++L+ + A+ ++KA K GT+Q + + ++ +KAIC+WGECY
Sbjct: 62 GTPPADNATPRPGFFSRHPEIFFLAGLLGIGGYIYRSSVNNKKFNAVQNDLAEKTPISPFEAYELRSQNSITPE--VFDAVKKQAKRYFPSNEATVAEFDLCLGTVLQGTA-----MKNTHHLERVLLSLPKNANGKVDVNLLLVAFSLAVKGSVDERLESLFALPLASKPTDDAT------------LTKAQIEKVLGYVLDTFQVPSEKRVVALEDKAYPYQEYAVATPDQLL-----------DAAVSVSIKA-----KTIDEGTQQ--------FNMDQFALLMKSKAICIWGECYN 319 The following BLAST results are available for this feature:
BLAST of EWM27264.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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