EWM27310.1, cds3361 (CDS) Nannochloropsis gaditana

Overview
NameEWM27310.1
Unique Namecds3361
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:243584..243931 +
Alignment locationCM002461.1:244610..245962 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27310.1
Productprotein kinase
Orig transcript idgnl|cribi|Naga_100453g3.8485.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:243584..243931 +
CM002461.1supercontigCM002461.1:244610..245962 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008266Tyr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|585109507|gb|EWM27310.1| (protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0 
Query:    1 MEVVDFPSPLIHRVEWERHLICGSEGHKFYGNVLVLKPGSSNPQRGSVYTAAPDYGGKIRSHALSNISPKAGRIYVLHRVLVHDKPHVVTMLASELRETNSPGITIRTEGPFYAVKITRLDYLHHDSDEKPFNEVAALQLLETLEPSLGPCPPSLPRGHAAARDDHHLYLFTPYGPGGDLLTYISQRPGGKARRLGEDKACRFFLDIVAALEYLEAARVVHRDLSLENLVLTLGEEMTAWEAEEEKEEEAVLWGEEEEGGEGGRQDADGGAREGRAHIHDQRVLLPPPHPDVLLGENARLPHMPHLLHALGYGPAPPPVPPGTLGEVTNVHVAGHLRASTVTDREAMLDFLRQPPPGPEAHHYRHLYYHTLQDALPPSSFPVSPFPPPPPPSTPAPKPPPPRRHWRCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTRRAREGREETGWEGKFVEVGEE 566
            MEVVDFPSPLIHRVEWERHLICGSEGHKFYGNVLVLKPGSSNPQRGSVYTAAPDYGGKIRSHALSNISPKAGRIYVLHRVLVHDKPHVVTMLASELRETNSPGITIRTEGPFYAVKITRLDYLHHDSDEKPFNEVAALQLLETLEPSLGPCPPSLPRGHAAARDDHHLYLFTPYGPGGDLLTYISQRPGGKARRLGEDKACRFFLDIVAALEYLEAARVVHRDLSLENLVLTLGEEMTAWEAEEEKEEEAVLWGEEEEGGEGGRQDADGGAREGRAHIHDQRVLLPPPHPDVLLGENARLPHMPHLLHALGYGPAPPPVPPGTLGEVTNVHVAGHLRASTVTDREAMLDFLRQPPPGPEAHHYRHLYYHTLQDALPPSSFPVSPFPPPPPPSTPAPKPPPPRRHWRCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTRRAREGREETGWEGKFVEVGEE
Sbjct:    1 MEVVDFPSPLIHRVEWERHLICGSEGHKFYGNVLVLKPGSSNPQRGSVYTAAPDYGGKIRSHALSNISPKAGRIYVLHRVLVHDKPHVVTMLASELRETNSPGITIRTEGPFYAVKITRLDYLHHDSDEKPFNEVAALQLLETLEPSLGPCPPSLPRGHAAARDDHHLYLFTPYGPGGDLLTYISQRPGGKARRLGEDKACRFFLDIVAALEYLEAARVVHRDLSLENLVLTLGEEMTAWEAEEEKEEEAVLWGEEEEGGEGGRQDADGGAREGRAHIHDQRVLLPPPHPDVLLGENARLPHMPHLLHALGYGPAPPPVPPGTLGEVTNVHVAGHLRASTVTDREAMLDFLRQPPPGPEAHHYRHLYYHTLQDALPPSSFPVSPFPPPPPPSTPAPKPPPPRRHWRCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTRRAREGREETGWEGKFVEVGEE 566
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|553176811|ref|XP_005852404.1| (hypothetical protein NGA_2052200, partial [Nannochloropsis gaditana CCMP526] >gi|422296128|gb|EKU23427.1| hypothetical protein NGA_2052200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 277.715 bits (709), Expect = 3.246e-88
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 
Query:  412 FGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTR 545
            FGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTR
Sbjct:    1 FGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVREVQERTR 134
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|553187807|ref|XP_005854683.1| (protein kinase [Nannochloropsis gaditana CCMP526] >gi|422294376|gb|EKU21676.1| protein kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 102.449 bits (254), Expect = 1.901e-19
Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 0 
Query:  401 PRRHW-RCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWV 537
            PR+H   C L D  MA  L  +       L ++   GK GYV+PE  +   ++ ++ DVWSLGV LY  LT HPLY  P D  F+ L  GEAR+++  YR+   L + E A DL+  ML P+P  RP L E+    W+
Sbjct:  369 PRKHRPVCRLTDLEMARSLSNASGPSVAPLGRRTVGGKKGYVAPECIFGTVVDWEAADVWSLGVSLYTMLTRHPLYTDPEDSGFELLCRGEARRMMEFYRDVYSLEISEAAVDLLAWMLAPNPAGRPRLEEVLEHAWL 506

HSP 2 Score: 66.6254 bits (161), Expect = 6.156e-8
Identity = 53/181 (29.28%), Postives = 80/181 (44.20%), Query Frame = 0 
Query:   98 ETNSPGITIRTEGPFYAVKITRL--DYLHHDSDEKPFNEVAALQLLETLEPSLGPCPPSLPRGHA-----------------AARDDHHLYLFTPYGPGGDLLTYISQRPGGKARRLGEDKACRFFLDIVAALEYLEAARVVHRDLSLENLVLTLGEEMTAWEAEEEKEEEAVLWGEEEEG 259
            +T  P ++  ++     +K+T     + H    + P  E+AA  +L +        P SL  G +                 A  DD  +YL  PY  GGDL  ++++   G    L E+ A  FF D+V  L YL++  + H D+SLEN+VL        WE EE  E  +    +EEEG
Sbjct:  199 QTGDPDMSRLSQSKCVVIKVTIHGPSWPHLLPSDPPLGELAAAHILRSYSHGHNGNPSSLGPGRSTGSCHDPSSSHVIPLLDALADDDCVYLVYPYASGGDLFDFVTKSEEG----LSEETARAFFTDMVGGLRYLKSKGLAHGDVSLENVVL--------WEQEEAVEGGSAGGEKEEEG 367
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|585101063|gb|EWM21046.1| (protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 103.219 bits (256), Expect = 1.948e-19
Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 0 
Query:  401 PRRHW-RCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWV 537
            PR+H   C L D  MA  L  +       L ++   GK GYV+PE  +   ++ ++ DVWSLGV LY  LT HPLY  P D  F+ L  GEAR+++  YR+   L + E A DL+  ML P+P  RP L E+    W+
Sbjct:  369 PRKHRPVCRLTDLEMARSLSNASGPSVAPLGRRTVGGKKGYVAPECIFGTVVDWEAADVWSLGVSLYTMLTRHPLYTDPEDSGFELLCRGEARRMMEFYRDVYSLEISEAAVDLLAWMLAPNPAGRPRLEEVLEHAWL 506

HSP 2 Score: 66.6254 bits (161), Expect = 6.402e-8
Identity = 53/181 (29.28%), Postives = 80/181 (44.20%), Query Frame = 0 
Query:   98 ETNSPGITIRTEGPFYAVKITRL--DYLHHDSDEKPFNEVAALQLLETLEPSLGPCPPSLPRGHA-----------------AARDDHHLYLFTPYGPGGDLLTYISQRPGGKARRLGEDKACRFFLDIVAALEYLEAARVVHRDLSLENLVLTLGEEMTAWEAEEEKEEEAVLWGEEEEG 259
            +T  P ++  ++     +K+T     + H    + P  E+AA  +L +        P SL  G +                 A  DD  +YL  PY  GGDL  ++++   G    L E+ A  FF D+V  L YL++  + H D+SLEN+VL        WE EE  E  +    +EEEG
Sbjct:  199 QTGDPDMSRLSQSKCVVIKVTIHGPSWPHFLPSDPPLGELAAAHILRSYSHGHNGNPSSLGPGRSTGSCHDPSSSHVIPLLDALADDDCVYLVYPYASGGDLFDFVTKSEEG----LSEETARAFFTDMVGGLRYLKSKGLAHGDVSLENVVL--------WEQEEAVEGGSAGGEKEEEG 367
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|553187816|ref|XP_005854686.1| (hypothetical protein NGA_0185400 [Nannochloropsis gaditana CCMP526] >gi|422294379|gb|EKU21679.1| hypothetical protein NGA_0185400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 91.2781 bits (225), Expect = 4.583e-16
Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 0 
Query:  436 GKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVRE 539
            GK GYVSPE       +  ++DVWSLG+ L I LTG PLY  P DP F  L  G   +VL HY  E  + LP  A  L+ AML  +P  RPTL E+    WV +
Sbjct:  266 GKPGYVSPEIVRGTLRDWGASDVWSLGICLVILLTGRPLYADPEDPCFNLLGHGMIAEVLGHYAREYGIDLPAGALSLVIAMLDANPAARPTLQEIMAHSWVMQ 369
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|585101069|gb|EWM21052.1| (kin2p [Nannochloropsis gaditana])

HSP 1 Score: 90.8929 bits (224), Expect = 2.351e-15
Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 0 
Query:  436 GKLGYVSPESYYEQPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVRE 539
            GK GYVSPE       +  ++DVWSLG+ L I LTG PLY  P DP F  L  G   +VL HY  E  + LP  A  L+ AML  +P  RPTL E+    WV +
Sbjct:  372 GKPGYVSPEIVRGTLRDWGASDVWSLGICLVILLTGRPLYADPEDPCFNLLGHGMIAEVLGHYAREYGIDLPAGALSLVIAMLDANPAARPTLQEIMAHSWVMQ 475
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|1072230788|gb|OEU15521.1| (ser/thr kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 82.0333 bits (201), Expect = 7.939e-14
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:  406 RCVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYE-QPINGQSTDVWSLGVILYIFLTGHPLYRYPWDPA------FKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVR 538
             C++ID GM +R+P  ++ + ++  Q  C GK  Y+SPE +      +G S D+W+ GVILYI LTG P    P+D A      F  +  G     L    E   +RL +   DL+ +ML  DP+ R TL+E+   PWV 
Sbjct:  108 NCLIIDMGMCLRVP-YRTIRRLIKPQGVC-GKHNYMSPEIFANTNAFDGFSIDLWAAGVILYIMLTGFP----PYDQASQTDQRFDLIVNGN----LIRQLESWDIRLSQNGGDLLQSMLQVDPRDRLTLAEIMAHPWVN 237
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|585101065|gb|EWM21048.1| (serine threonine protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 85.5001 bits (210), Expect = 1.005e-13
Identity = 51/137 (37.23%), Postives = 73/137 (53.28%), Query Frame = 0 
Query:  407 CVLIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQP-----INGQSTDVWSLGVILYIFLTGHPLYRYPWDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWVR 538
            C LID  MA R   + S  +   +     GK  Y  PE++Y +P     ++  + D+W+LG+ LY+  TG PLY+ P D AF  LA+G A  +L HY E   L LP +   L+  ML P+  +R TL E+    WV+
Sbjct:  535 CRLIDLEMA-RYVPTSSCPSSPPSYYPMGGKSSYAPPEAFYNRPSSPYPLDPYACDIWALGICLYMLCTGRPLYQGPEDDAFLLLASGGAPGLLNHYEEAYGLTLPRSVHKLLAGMLCPEGDQRMTLEEVMRWKWVQ 670
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|673034018|ref|XP_008870970.1| (CAMK protein kinase [Aphanomyces invadans] >gi|574473832|gb|ETW00835.1| CAMK protein kinase [Aphanomyces invadans])

HSP 1 Score: 82.8037 bits (203), Expect = 1.531e-13
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 0 
Query:  409 LIDFGMAVRLPESKSGKTIVLTQQRCRGKLGYVSPESYYEQ-PINGQSTDVWSLGVILYIFLTGHPLYRYP--WDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWV 537
            +IDFG+ V +P   +G T  L      GK+ Y+ PE Y  Q P NG + D+WS+GV+L+I +TG P +  P   DP F+ +A G   ++L  +   M    P   + L   ++  DP++R TL ++   PWV
Sbjct:  224 IIDFGLCVGIPVDANGMTYALPPSGAVGKIFYMPPEIYRNQVPFNGFAADIWSMGVMLFIMITGAPPFERPDDMDPRFQMIATGRMNEMLDSW--GMTQVSPSVRDLLNGLLVVQDPRRRLTLDQIMQHPWV 353
[Close]
BLAST of EWM27310.1 vs. NCBI_GenBank
Match: gi|219121985|ref|XP_002181336.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407322|gb|EEC47259.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 82.8037 bits (203), Expect = 3.279e-13
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0 
Query:  406 RCVLIDFGMAVRLPES---KSGKTIVLTQQRCR---------GKLGYVSPESYYE-QPINGQSTDVWSLGVILYIFLTGHPLYRYP--WDPAFKALAAGEARQVLAHYREEMKLRLPETAEDLICAMLHPDPKKRPTLSELRGAPWV 537
            RC++ID GM +R+P +   K G    +T+   R         GK  Y+SPE +      +G + D+W+ GVILYI LTG P Y      D  F+ +A G   + L ++     ++L E A +L+  ML  DP++RPTL+E+   PWV
Sbjct:  272 RCMIIDMGMCLRVPYNDPHKPGAVTDVTRGSTRRLMRPQGVCGKHNYMSPEVFANTDSFDGFAIDLWAAGVILYIMLTGFPPYDQASRTDQRFELIATGRLMEQLRNW----NIQLSEEAGNLLQRMLTLDPRERPTLAEILADPWV 414
The following BLAST results are available for this feature:
BLAST of EWM27310.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109507|gb|EWM27310.1|0.000e+0100.00protein kinase [Nannochloropsis gaditana][more]
gi|553176811|ref|XP_005852404.1|3.246e-88100.00hypothetical protein NGA_2052200, partial [Nannoch... [more]
gi|553187807|ref|XP_005854683.1|1.901e-1940.58protein kinase [Nannochloropsis gaditana CCMP526] ... [more]
gi|585101063|gb|EWM21046.1|1.948e-1940.58protein kinase [Nannochloropsis gaditana][more]
gi|553187816|ref|XP_005854686.1|4.583e-1646.15hypothetical protein NGA_0185400 [Nannochloropsis ... [more]
gi|585101069|gb|EWM21052.1|2.351e-1546.15kin2p [Nannochloropsis gaditana][more]
gi|1072230788|gb|OEU15521.1|7.939e-1436.43ser/thr kinase [Fragilariopsis cylindrus CCMP1102][more]
gi|585101065|gb|EWM21048.1|1.005e-1337.23serine threonine protein kinase [Nannochloropsis g... [more]
gi|673034018|ref|XP_008870970.1|1.531e-1335.61CAMK protein kinase [Aphanomyces invadans] >gi|574... [more]
gi|219121985|ref|XP_002181336.1|3.279e-1336.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3370rna3370Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications