EWM27320.1, cds3351 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|585109520|gb|EWM27320.1| (trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1557.35 bits (4031), Expect = 0.000e+0 Identity = 764/764 (100.00%), Postives = 764/764 (100.00%), Query Frame = 0
Query: 1 MTLLPPHSHTFIHTQIHYQQRWYPATLWWSVGYRGVPSSLSSTLKCISCDICWRATQPKRQKPYHRLEAWQELGVASMRFSLLTLLLLLHQSRGFFWLPAAPGLLLERFRGRSPFRVPLRVAASSRGLPEDDPTSPLPILPPGLENFRRLLSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGGRRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETWRIPQAPARLTVNRR 764
MTLLPPHSHTFIHTQIHYQQRWYPATLWWSVGYRGVPSSLSSTLKCISCDICWRATQPKRQKPYHRLEAWQELGVASMRFSLLTLLLLLHQSRGFFWLPAAPGLLLERFRGRSPFRVPLRVAASSRGLPEDDPTSPLPILPPGLENFRRLLSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGGRRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETWRIPQAPARLTVNRR
Sbjct: 1 MTLLPPHSHTFIHTQIHYQQRWYPATLWWSVGYRGVPSSLSSTLKCISCDICWRATQPKRQKPYHRLEAWQELGVASMRFSLLTLLLLLHQSRGFFWLPAAPGLLLERFRGRSPFRVPLRVAASSRGLPEDDPTSPLPILPPGLENFRRLLSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGGRRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETWRIPQAPARLTVNRR 764
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|873229370|emb|CEM13165.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 429.098 bits (1102), Expect = 6.751e-138 Identity = 263/624 (42.15%), Postives = 350/624 (56.09%), Query Frame = 0
Query: 134 TSPLPILPPGLENFRRLLSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGG-----RRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDS-LAPGQYAALYQDVGEEGSECLGAGVISEETWR 751
TS P LP E L SL K + L+L+ LGD+ + G +VPGCV+ V + D AV V G +DAR+S GLVALVA+ L G +L++ P + + + PGR NGL +++ T+Q ++ +R+ A + E +AG++ P P S + EVAVLLSGGVDSSVA LL +G + AFYL+IWLEDEL+HL +CPWEED FA C Q +PLE + LQ YW VV +TI EA GRTPNPD++CN+ VKFG F D GR + +VATGHYA+ + G VRL RSPDRIKDQTYFL L+QEQLA A FPIG ++K ++R +A LPT +R+DSQGICFLGKLR++DFL HYLG++PG +V + ++G+H GLW HT+GQRKG+ P L + GP++V KD N L VTN +++ + R+ +V+ + W+ G PP L G ++M EVQ+RHGP +H +RVR+L DG GE S E+ L +DS +APGQ+ A Y G ECLG G I ETW+
Sbjct: 28 TSKDPQLPLQAEG---ALESLRAQPSQKDRFLHLVRLGDELTRRNQQPGGLPDGFEQRAEKVPGCVATVKVLATLDDD--AVKVYGTADARVSQGLVALVAEALEGLPAPRVLAVPPDAFAGSTAMASFL---TPGRLNGLRSLIMTIQRQIASRV----------------AGVGEEQESETSASAGSEGL---------------------PLGPPSFVLSEAAGEVAVLLSGGVDSSVAARLLVDRGERVRAFYLRIWLEDELSHLGECPWEEDLRFARDTCDQL-KIPLELVSLQDSYWDSVVRYTISEAAAGRTPNPDVMCNTRVKFGAFCDDHGRHFKRVATGHYAQVRR----DQENGPVRLFRSPDRIKDQTYFLCGLSQEQLAMADFPIGTFDKARVRQLARDYSLPTASRRDSQGICFLGKLRWEDFLTHYLGKNPGPIVDVAGGELLGEHHGLWLHTVGQRKGLGPYLRDKMVHRGPFFVVGKDPDTNTLLVTNDYDAI----------DRPRQELQVESIGWIAGKPPASLSTAGDAIM-EVQLRHGPKTHM-ARVRLL-DGDGE---SAEVHLEEKDSGIAPGQFVAFYA-----GDECLGGGRI-RETWK 579
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|299470175|emb|CBN78203.1| (tRNA-methyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 407.527 bits (1046), Expect = 3.519e-131 Identity = 222/436 (50.92%), Postives = 279/436 (63.99%), Query Frame = 0
Query: 359 VLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGE------------------------------GLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDD-------GRGEG-----------PSSLEITLPREDS-LAPGQYAALYQDVGEEGSECLGAGVI 745
+LLSGGVDSSVA+ LL QGYK AFYLKIWLEDELAHLN+CPWEED ++A+AVC QAG VPLE +PLQ+EYW QVV++T++EA+EGRTPNPD++CNS +KFG+FYD +G+ + VATGHYAR + G + G VRL+ SPD +KDQTYFL LTQ+QL +A FP+G Y K QIR +AE DLPTK RKDSQGICFLGKL+FD+FL+HYLG SPG +V + +G+H+GLWFHTIGQRKG+ P L LGPWYVA KD+ RNVL VTN E+++ R FRV+ + W+ G PP E L S+ L V+ RHGP R +R++ + GR G P+ + L +DS LAPGQ+AA Y G EC+G+GV+
Sbjct: 1 MLLSGGVDSSVAMRLLLDQGYKIRAFYLKIWLEDELAHLNECPWEEDLAYATAVCEQAG-VPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPSDRSAAAAAAAAGTEEPPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIV-DQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMERNVLVVTNDREAIA----------SPREVFRVEALQWISGRPPAE-LARDRSMRLRVKTRHGPQM-RDCLLRLVPEVAPGDSGGRAGGAEATVEDRVGSPTRGYVNLDSKDSALAPGQFAAFYL-----GGECVGSGVM 417
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|551646166|ref|XP_005825870.1| (hypothetical protein GUITHDRAFT_76798 [Guillardia theta CCMP2712] >gi|428169961|gb|EKX38890.1| hypothetical protein GUITHDRAFT_76798 [Guillardia theta CCMP2712]) HSP 1 Score: 404.06 bits (1037), Expect = 1.294e-130 Identity = 209/397 (52.64%), Postives = 277/397 (69.77%), Query Frame = 0
Query: 354 SEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETW 750
SEEVAVLLSGGVDSSVAL L+++QG+KP AFYL+IWLEDELAHL +CPWEEDWS+AS+V Q VPLE++ LQ+EYW QVV + I+EAK GRTPNPDI+CNS +KFG+F + +G+ + +VA+GHYA + G RLM SPD++KDQTYFL L Q+QL A FPIGGY K ++R +A +LPT+ RKDSQGICFLGKL+F+DF+ H+LGE PG V+ +G+H+GLWF+TIGQRKG+ + T LGPW+VA KD RN+L+V+N + + EGP RR+F V+ + W+ G+ P + +L L ++ RHGPN H G + L G+ G SL+ R+ LAPGQ+AALY +G EC+G G+I++ T+
Sbjct: 43 SEEVAVLLSGGVDSSVALELVRRQGFKPRAFYLRIWLEDELAHLGECPWEEDWSYASSVAEQL-KVPLESISLQEEYWEQVVEYLIREAKMGRTPNPDIMCNSRIKFGMFEEYVGKHFSRVASGHYAVSCHDDVGTRPS---RLMMSPDKVKDQTYFLCNLRQDQLKHALFPIGGYTKEKVRELAREFNLPTQRRKDSQGICFLGKLKFEDFVGHHLGEDPGPVIDFHTGRELGEHRGLWFYTIGQRKGL-GSATRKVTHLGPWFVAGKDRERNMLYVSNQYDVI------EGP----RRSFDVEQINWMAGSLPED-----DALRLRIKTRHGPNIHDG--LLTLSQGKLSGRVSLD---GRDSGLAPGQWAALY-----DGEECIGGGMIADSTF 409
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|922855341|gb|KOO23799.1| (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 402.905 bits (1034), Expect = 7.513e-130 Identity = 215/408 (52.70%), Postives = 269/408 (65.93%), Query Frame = 0
Query: 355 EEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHL--NQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVP-------------AAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISE 747
EEVAVLLSGGVDSSVALH L G++ AFYL+IWLEDE AH CPWEEDW++ AVC QAG VPLEA+ LQKEY VV + + EA GRTPNPDI+CNS +KFGVF+D +G + VA+GHYAR P +AGGK +V L+RS D KDQTYFLS+L QEQL+ A FPIGG K ++RA A L LP + RKDSQGICFLG+L +DDFLR +LGE+PG ++ E +VG H+GLW+HT+GQR+G+ P L NA+R GPW+V KD NVL+ T S TG ++AR FR G+ WV G PP ++PG L L+V+VRHG +H + V + DG G + +E+ R+ LAPGQ+AA Y +G CLG+GVI E
Sbjct: 67 EEVAVLLSGGVDSSVALHQLLAAGHRCRAFYLRIWLEDEQAHAARGDCPWEEDWAYCEAVCEQAG-VPLEAVSLQKEYQEHVVGYLVAEAAAGRTPNPDIMCNSRIKFGVFHDRVGCHFGHVASGHYARTAPTRSTGSRATVPFSSAGGKP---MVELLRSADAHKDQTYFLSQLRQEQLSSAIFPIGGMSKPEVRAAAHALHLPNRARKDSQGICFLGQLNYDDFLRDHLGEAPGHIIEFETGEIVGTHRGLWYHTVGQRRGLGPVLNNAFRAFGPWHVVHKDFEANVLYATRSY-------TG---ADKARNAFRTAGINWVAGHPP--TVLPGVPLHLQVKVRHGAQTHEAT-VALHADGYG---AEVELA-ERDKGLAPGQFAAFY-----DGEVCLGSGVIVE 448
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|397601234|gb|EJK57851.1| (hypothetical protein THAOC_22066 [Thalassiosira oceanica]) HSP 1 Score: 404.445 bits (1038), Expect = 9.923e-128 Identity = 236/574 (41.11%), Postives = 327/574 (56.97%), Query Frame = 0
Query: 188 RRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGE--SPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVF---YDVMGRRYPKVATGHYAR--AVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGAS---LMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPRED-SLAPGQYAALYQDVGEEGSECLGAGVISEETW 750
+RVPGC++ V VR + + V + G SDA LS GL+A+VA L+G + IL L+ +L ALGL + GR++G+A++++ +QD++ + L +S Q +R+AI +++P VA+LLSGGVDSSVALHLL QQGY A+YL+IWLEDELAHL +CPWE+D VC AGNVPLE + L KEY +VV +TI+EA++GRTPNPDI+CNS VKFG F D G ++ VA+GHYAR P RL R+PD +KDQ+YFL LTQ+QL++ FPIG Y+K ++R +A +LP + R DSQG+CFLGK++FD+FL YLG PG+VV V+GKH GLW+HT+GQRKGI + GPWYV AKD ++V++V+N + E +AR F V+ + W+ P + + + ++++RHGP +GS +++ DG SS + L +D LAPGQY Y + E LGAGVISE+ W
Sbjct: 127 QRVPGCIATV--LVRATLSRNIVTISGKSDALLSGGLIAIVADVLSGVDVTAHEILQLDANSLTSALGLKPIL---NTGRNDGVASMIRVIQDQIRSLLGDSSGNTIQPS--SRDAIRNETSDKPT---------------------------------------------VAMLLSGGVDSSVALHLLLQQGYNVTAYYLRIWLEDELAHLGECPWEDDLHVCQEVCEHAGNVPLETVSLGKEYRDRVVQYTIEEAQQGRTPNPDIMCNSRVKFGCFLEYIDQSGMKFDHVASGHYARLEDEPRESSPGTTRAKRLFRAPDPVKDQSYFLCALTQKQLSKVLFPIGQYKKSEVRQLASEFNLPNRNRPDSQGLCFLGKVKFDEFLSSYLGSRPGDVVDAMNGEVIGKHNGLWYHTVGQRKGIGKVMFPLATAHGPWYVVAKDQSKDVVYVSNRYD--------EDDFAKARSEFEVEDVRWISNQHPAQAMSSDGKWEVVRFDMKIRHGPKIVQGS-LQLKGDG-----SSGNVKLDLKDGGLAPGQYVVFYSQTSD---EVLGAGVISEKHW 631
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|1210511349|dbj|GAX29580.1| (tRNA-uridine 2-sulfurtransferase [Fistulifera solaris]) HSP 1 Score: 389.037 bits (998), Expect = 3.694e-123 Identity = 236/590 (40.00%), Postives = 322/590 (54.58%), Query Frame = 0
Query: 189 RVPGCVSVVHMTVRFSSDGSAVH-------VDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLN-QCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVM----GRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDS-LAPGQYAALYQDVGEEGSECLGAGVISEETWRIP-----QAPARLT 760
+VPGC + VH+ + +SD S + G +DA +S GLVA++A + +S +TI + ++ LGL + +PGR++G+A++ + LH+S F P +T K + + PS VA+LLSGGVDSSVAL LL QQ Y+ AFYLKIWL+DE AHL CPWEEDW VC QA +VPL A+ LQ+EY +VV + +++A GRTPNPDILCNS +KFG FYDV+ ++ +ATGHYAR G V L R+PD IKDQ+YFL LTQEQL + FP+G EK Q+R +A+ +LP + R DSQG+CFLG+++FD FL+ YLG PG VV V+G+HQG+WFHTIGQRKGI L GPWYV +KD + +++ TN E + R+ ++ +TW+ G P ++ G + L +++RHGP RG + L+D PS + L + DS LAPGQY Y D G ECLG+G++SE W P QA +LT
Sbjct: 41 KVPGCTANVHIQLVLTSDSSTTRNSRTIQSLQGTADALVSQGLVAVIASCVEQQSEDTIGQISAESITARLGLQQHL---SPGRNDGVASLWRI--------LHQSLQSSF-----------------PASSTTSAK--TIKYSQQPS---------------------------VALLLSGGVDSSVALRLLLQQNYRVTAFYLKIWLQDENAHLGGTCPWEEDWKICQQVCEQA-DVPLRAISLQQEYHERVVEYAMEQASLGRTPNPDILCNSRIKFGCFYDVLMSQQSEQFDYIATGHYARVERDDNGVS----VCLFRAPDAIKDQSYFLCTLTQEQLQKTLFPLGHLEKTQVRQLADEFELPNRHRPDSQGLCFLGQVKFDQFLKSYLGTQPGSVVDAVTGDVIGQHQGVWFHTIGQRKGIGKALNPQATARGPWYVVSKDPVKRIVYCTNQYELF----------DAQRKRVELEDVTWMSGQVPA-MVSDGNACRLTMKLRHGPRLARG--LLQLNDAE---PSKGTVELEQMDSGLAPGQYVVFYADDG----ECLGSGIMSESQWNRPICLETQAVEQLT 548
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|1210528820|dbj|GAX12463.1| (tRNA-uridine 2-sulfurtransferase [Fistulifera solaris]) HSP 1 Score: 388.267 bits (996), Expect = 3.435e-122 Identity = 224/577 (38.82%), Postives = 319/577 (55.29%), Query Frame = 0
Query: 189 RVPGCVSVVHMTVRFSSDGSAV-------HVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGAREAILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTHSFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLN-QCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVM----GRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETWRIP 753
+VPGC + VH+ + +SD S ++G +DA +S GLVA++A + ES + I + ++ LGL + +PGR++G+A++ +T+Q + + ++PA + + +PS + P+ VA+LLSGGVDSSVAL LL QQ Y+ AFYLKIWL+DE AHL CPWEEDW VC QA NVPL+A+ LQ+EY +VV + +++A GRTPNPDILCNS +KFG FYDV+ ++ +ATGHYAR + + RL R+PD +KDQ+YFL LTQEQL + FP+G EK Q+R +A+ +LP + R DSQG+CFLG+++FD FL YLG PG VV +G+HQG+WFHTIGQRKGI L GPWYV +KD + +++ TN E + R+ ++ +TW+ G P ++ G + L +++RHGP RG +++ + +G LE + LAPGQY Y D G ECLG+G++SE W P
Sbjct: 88 KVPGCTANVHIQLILTSDASTTINSRTIQSLEGTADALVSQGLVAVIASCVEQESEDAIGQISAESITTRLGLQQHL---SPGRNDGVASLWRTLQQSLQS---------------------SSPA-------------SFITSTEPSTQSQQPS--------------------VALLLSGGVDSSVALRLLLQQNYRVTAFYLKIWLQDENAHLGGTCPWEEDWKICQQVCEQA-NVPLQAISLQQEYHERVVEYAMEQASLGRTPNPDILCNSRIKFGCFYDVLMSQQAEQFDYIATGHYARVER----DDDDASARLFRAPDAVKDQSYFLCTLTQEQLQKTLFPLGHLEKAQVRQLADEFELPNRHRPDSQGLCFLGQVKFDQFLESYLGTQPGSVVDAVTGDNIGQHQGVWFHTIGQRKGIGKALNPQATARGPWYVVSKDPAQRIVYCTNQYELF----------DAQRKHVELEDITWMSGQLPA-MVSGGNACHLTMKLRHGPRLARG-LLQLNNADFSKGTVELE---QMDSGLAPGQYVVFYADDG----ECLGSGIMSESQWNRP 583
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|219126278|ref|XP_002183388.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405144|gb|EEC45088.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 368.622 bits (945), Expect = 9.529e-118 Identity = 198/393 (50.38%), Postives = 260/393 (66.16%), Query Frame = 0
Query: 357 VAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRR-YPKVATGHYARAVPAAGGKEGE-GLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISE 747
VA+LLSGGVDSSVAL+LL QQGY AFYLKIWLEDELAHL CPWE+D+ VC QAG +PLE + LQ Y ++V+A+T+ EA++GRTPNPDI+CNS VKFG FY+ + +R + VA+GHYA+ V K+ E G +RL+R+PD IKDQ+YFL LTQ+QL R FPIG +K Q+R +A+ LP + R DSQG+CFLGK++FD+FL YLG PG +V VVG+H G+W+HT+GQRKGI L GPWYV AKD G++V++ +N + E +R F V+ + W+ G PP LL G +++RHGP+ +G+ +R L + GEG L+ ++ LAPGQY Y+D ECLGAGVISE
Sbjct: 1 VALLLSGGVDSSVALNLLVQQGYDVTAFYLKIWLEDELAHLGHCPWEDDYRVCQEVCEQAG-IPLETVSLQNAYKSRVIAYTVHEAEQGRTPNPDIMCNSRVKFGCFYEAIDQREFDFVASGHYAQLV-----KDTETGSMRLLRAPDPIKDQSYFLCTLTQDQLQRVLFPIGHLQKSQVRDLADEFILPNRLRPDSQGLCFLGKVKFDEFLAVYLGTRPGPIVDAGTGDVVGQHHGVWYHTVGQRKGIGRVLDPLATSRGPWYVVAKDPGKDVVYCSNQYD--------EDIFTASRSEFAVENIHWIAGQAPPNLL-KGDGGRFVMKIRHGPDLVKGT-LR-LTNTAGEGDVKLD---SKDGGLAPGQYVVFYKD-----EECLGAGVISE 368
BLAST of EWM27320.1 vs. NCBI_GenBank
Match: gi|546315177|ref|XP_005715790.1| (unnamed protein product [Chondrus crispus] >gi|507112283|emb|CDF35971.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 374.4 bits (960), Expect = 1.709e-116 Identity = 201/411 (48.91%), Postives = 257/411 (62.53%), Query Frame = 0
Query: 355 EEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQCPWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNPDILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRSPDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKDSQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQRKGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEEARRT-FRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILDDGRGEGPSSLEITLPREDS-LAPGQYAALYQDVGEEGSECLGAGVISEETWRIPQAPARLTVNR 763
++VAVLLSGGVDSSVALH +Q+ G +PHAFYLKIWLEDELAHL CPWEED +A+AVC+QA NV L +P QK YW +VV++T+ EA+ GRTPNPD++CNS +KFG F++ +GR Y +VATGHYAR GL L S D KDQTYFL+ L QEQ+A ++FP+G K+++R +A+ DLP KTRKDSQGICFLGKL+FDDFL H+LG G +V E +G+H+G WF TIGQR+GI L+ GPWYV KDV RNV++V+ S E+ +RT F + W+ G P L GA L V+ RHGP H R +G E+ L D LAPGQ++A Y D CLG+ VI+ + + AP + R
Sbjct: 239 KDVAVLLSGGVDSSVALHQIQESGARPHAFYLKIWLEDELAHLGSCPWEEDMEYAAAVCQQA-NVKLTDVPFQKAYWDEVVSYTVSEARRGRTPNPDVMCNSRIKFGAFFNRIGRYYDRVATGHYARQTV----NPETGLAELRLSADMWKDQTYFLAHLRQEQIAASSFPLGNIPKNEVRELAKAYDLPNKTRKDSQGICFLGKLKFDDFLGHHLGREMGSLVEFETGRELGQHKGFWFFTIGQRRGI--GLSG-----GPWYVVCKDVERNVVYVSKEYHS-----------EKQQRTWFEFETPLWIAGEWPNALGFNGAQTALRVKTRHGPKFHNAVVTRTWAEGG-------EVELAEGDKGLAPGQFSAFYDD----EDRCLGSAVIANDV-HLADAPTDIIRRR 614 HSP 2 Score: 67.3958 bits (163), Expect = 5.815e-8 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0
Query: 145 ENFRRLLSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGGRRVPGCVSVVHMTVRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPKALGLTGGMMQQAPGRHNGLANIVQTVQDEV 280
++ R + +SL T DE +A+ + LI L D A + + RV GC S+ H+ V S D V + G SD+ ++ GL+A V GL G + + + ++ P L +A GL G P R GL +I+ VQ++V
Sbjct: 80 QHLRTIANSLGTLDEPQARYMRLIHLADSIPAMSDNELHP--STRVSGCTSISHVEVVMSDD-RTVKMRGFSDSMVARGLMAFVILGLDGCTADEVAAVMPLELLEASGLRG---SAGPSRMMGLTSILSYVQNKV 209 The following BLAST results are available for this feature:
BLAST of EWM27320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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