EWM30346.1, cds335 (CDS) Nannochloropsis gaditana

Overview
NameEWM30346.1
Unique Namecds335
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:824849..828406 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30346.1
ProductdDENN
Orig transcript idgnl|cribi|Naga_100003g162.1863.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:824849..828406 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR005112dDENN_dom
IPR001194DENN_dom
Homology
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|585113005|gb|EWM30346.1| (dDENN [Nannochloropsis gaditana] >gi|585113006|gb|EWM30347.1| dDENN [Nannochloropsis gaditana])

HSP 1 Score: 2430.98 bits (6299), Expect = 0.000e+0
Identity = 1185/1185 (100.00%), Postives = 1185/1185 (100.00%), Query Frame = 0
Query:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVRRRGRRRRGIKKRNHILRFKSDHIPWDPATSVFSTFLMTFCLTIGRDLQQQHDVSFDAIQRQASEHLVTSKDATSDGESVIGPEGTNDPSVDRRSVTEREHGKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMRCLSEDKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRLGAVDMALQALTEMNEAGFAVDASVVSTLLSGAASSQASQALSLLDWNKIRQRNDGRSGSSGGSGTGHYSVHGSQKHGARLSSGTPKVFKEALSAFRKIGTPGQSGFWSLSNGGNGGSADGRNQTGVGRGGEVDNACAGNAGVGNQGSWERQSTRGTQVIANPVSLPFELILDESARRDAEARAFQSDSNFGSGAKGGEREGANEGEAVSDSKSDATAYNTPSINFQVKYGESLLNVLFPNLALDVDSETCPQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQQQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTASDWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILSAAFRKSSAASSTIFWNLILWYRDFALPVAFLLQNSVEGAATAPLI 1185
            MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVRRRGRRRRGIKKRNHILRFKSDHIPWDPATSVFSTFLMTFCLTIGRDLQQQHDVSFDAIQRQASEHLVTSKDATSDGESVIGPEGTNDPSVDRRSVTEREHGKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMRCLSEDKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRLGAVDMALQALTEMNEAGFAVDASVVSTLLSGAASSQASQALSLLDWNKIRQRNDGRSGSSGGSGTGHYSVHGSQKHGARLSSGTPKVFKEALSAFRKIGTPGQSGFWSLSNGGNGGSADGRNQTGVGRGGEVDNACAGNAGVGNQGSWERQSTRGTQVIANPVSLPFELILDESARRDAEARAFQSDSNFGSGAKGGEREGANEGEAVSDSKSDATAYNTPSINFQVKYGESLLNVLFPNLALDVDSETCPQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQQQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTASDWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILSAAFRKSSAASSTIFWNLILWYRDFALPVAFLLQNSVEGAATAPLI
Sbjct:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVRRRGRRRRGIKKRNHILRFKSDHIPWDPATSVFSTFLMTFCLTIGRDLQQQHDVSFDAIQRQASEHLVTSKDATSDGESVIGPEGTNDPSVDRRSVTEREHGKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMRCLSEDKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRLGAVDMALQALTEMNEAGFAVDASVVSTLLSGAASSQASQALSLLDWNKIRQRNDGRSGSSGGSGTGHYSVHGSQKHGARLSSGTPKVFKEALSAFRKIGTPGQSGFWSLSNGGNGGSADGRNQTGVGRGGEVDNACAGNAGVGNQGSWERQSTRGTQVIANPVSLPFELILDESARRDAEARAFQSDSNFGSGAKGGEREGANEGEAVSDSKSDATAYNTPSINFQVKYGESLLNVLFPNLALDVDSETCPQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQQQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTASDWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILSAAFRKSSAASSTIFWNLILWYRDFALPVAFLLQNSVEGAATAPLI 1185          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|298707247|emb|CBJ25874.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 209.534 bits (532), Expect = 2.271e-51
Identity = 109/235 (46.38%), Postives = 153/235 (65.11%), Query Frame = 0
Query:    5 TPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASG---VSLPNLPERRQAKLLRAIHEHANL 236
            T  L T   G  V+APKCLCLLS +P+    R WLL LYR+S SP +IPLERY+ NFLLEVPTP PGRV+V Y+M +  + + CP P++PV W G +  E +F+CLS +N++ +   +LLE+ ++L S+QLSLLT  AE L+  ++PL++ HV+IP+LP   L + A +P+PFL+G H          +   V  VDLD N V    G    ++P LP++R++KLL  + EHA L
Sbjct:  107 TEPLTTLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAW-GSVPFEPLFQCLSHENIVILLTCLLLERSIVLKSSQLSLLTPCAEVLSLVLYPLSWSHVYIPVLPEALLGVLA-APMPFLIGVHRSFVEGTDMDVAPYVVQVDLD-NDVVEMGGEEAATMPPLPQKRRSKLLAKLAEHAQL 338          

HSP 2 Score: 139.043 bits (349), Expect = 1.665e-29
Identity = 137/459 (29.85%), Postives = 200/459 (43.57%), Query Frame = 0
Query:  372 DWDAIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSL----PDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVRRRGRR-----RRGIKKRNHILRFKSDHIPWDP---ATSVFSTFLMTFCLTIGRD-LQQQHDVSFDAIQRQASEHLVTSKDATSDG--ESVIGPEGTNDPSVDRRSVTEREHGKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMRCLSE---DKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRLGAVDMALQALTEMNEAGFAVDASVVSTLLSGAA-----SSQASQALSLLDWNKIRQRN-DGR 806
            DWDA+R+AFL FF+  L  YR+ LV+P+K +P P   F   D++     +  PF E    TQA Q+F+DAR+QP+ +D+ ++  FD  I A KR +    +      +  A+F RP  F    + KT+ AL PD + L    P              K++       D  G G    G      R        RRG+  R+   R   D   W P     +VF+ F++ FC TIG D ++ +    F     + S  +V     T+ G   S  G  G +D +V  R+V E E  +++E                     S  E             R   RM   SE   D REER++ A   L +AF+ L+ MR +    +E +YR LI A  R G  + A+  +  M   G   DA V   L+   A     +   +  LSLLDW+K + ++ DGR
Sbjct:  378 DWDAVREAFLRFFVTFLSGYRRCLVYPTKANPNPARLFNVDDYLDKLDRDSRPFAEAMCDTQAFQNFIDARIQPETDDL-DVVFFDACIAA-KRNRSMLHV----TKKSDANFLRPDTF---VKAKTVFALTPDTTGLDMTAPARSHESRNEGSTFNKYFGGSSKKGDSGGDGNAGSGEEGGGGRRSSTSLAGRRGVFARSGSSRGGGDD-DWSPLCAEATVFAVFIVGFCATIGVDPVRPKRGAGF---APKGSVAVVPGAATTTPGPVASKAGGSGGDDSAV--RTVLEEEEEEEKE--------------------ESVRETASGGIGGGGVKVRKSSRMASFSELKHDVREERLYKANAALMVAFEALEAMREKAPAGEEAVYRSLISACGRCGNSEKAMAVVEMMMSTGIVPDAMVSRCLVDAFAMDDSFTDGGAHPLSLLDWSKFQPKHRDGR 801          

HSP 3 Score: 101.293 bits (251), Expect = 7.478e-18
Identity = 53/134 (39.55%), Postives = 71/134 (52.99%), Query Frame = 0
Query: 1087 RRFVARFSVHCTASDWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILS---------------------------------AAFRKSSAASS-------TIFWNLILWYRDFALPVAFLLQNSVEGAA 1180
            RRFV+RFSVH TA  W G+TGPGTPLWCEYL PWVLRKE  TIL   G+  + S                                 AA+R+   A++       T+FWNL++ +R++ LP+ FLL ++   A+
Sbjct: 1115 RRFVSRFSVHSTAEGWEGTTGPGTPLWCEYLPPWVLRKEFHTILSAYGVQYVCSERFRLGLGPLEDGTGPAGGGAGGAQPPSGGGGDAAWREGGGANASRRSVDRTVFWNLVVHFREYCLPITFLLADAASLAS 1248          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|1214711692|gb|OWZ22684.1| (hypothetical protein PHMEG_0002564 [Phytophthora megakarya])

HSP 1 Score: 181.415 bits (459), Expect = 1.688e-42
Identity = 155/567 (27.34%), Postives = 266/567 (46.91%), Query Frame = 0
Query:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLD--LVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPA-----SGVSLPNLPERRQAKLLRAIHEHANLFE-------------AQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWD--------AIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPS-EWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDE--PFIYDGFPMLQEKWYTPPRPVNDL 536
            +Q  + D A+ P  G VF PKC+ + S+YP+  A R +L Q+YR++ S + +P+ERYI NFL+E+P P PG++ VQ ++ D  L++  P P    P++         +F+ L   N+L VF+ + LE +V L S  + LLT VAE L A + P ++   +IP+LP   L +  ++PVPFL+G H+D  + VA +  + V  +DLD N+V PA       +S+P LP+R  +KL   + E A +F+               + +L+     + +  +  P  +  +    +      +S+         R++AA  LP++ L+ S    P      ++LG +  + S   SP SP  +                       G   +G +T+  ++         IR AFL FF+ +L++Y  ++V  +   P+P   F    F+  +   +  PF+ +   TQ    F++ R     + + E+  FD+ I  +          +IG  +   SF   +  R  +  +T +A  P    LPD+   + Y  FP L++  +   R   +L
Sbjct:  348 VQDLSADAASAP--GPVFCPKCIVVTSQYPYFSAFRQFLQQIYRVTLSESPMPIERYIANFLVEIPLPPPGQIQVQLALPDRNLIISRP-PKNELPLV---DFPFRPLFQVLDLNNVLLVFSCIALELKVALCSKHIGLLTPVAEALLAILLPFSWQGAYIPVLPTSLLDVI-DAPVPFLVGTHSDCLKQVAGRTANVV-FIDLDHNRVIPAVDESGKNISVPKLPDREGSKLRAKLAEVACIFDPYAAGISRVDLAFPNEEHLEPIGNFASDHGQTIPLATSYSESSMSDSLNTHYSIGKIKRGR--RSSAAFSLPSTSLVSS----PSAAFSRANLGLTRATFSLSASPTSPTGT-----------------------GNDASGGLTDSRYNDTDNFSTEGIRKAFLRFFVTLLKKYASYVV--THGTPRPSALFDSKRFLQDNSDVQSRPFISQLIATQMFDRFIEDR--AFNQQLPEVLFFDQSINQKLNRSL-----SIGKKKYDCSF---LDDRSDEIQETFIAPPPSNIGLPDDGTVYTYKAFPRLKKNLFGKVRKPREL 865          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|219113641|ref|XP_002186404.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583254|gb|ACI65874.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 176.022 bits (445), Expect = 7.510e-41
Identity = 131/466 (28.11%), Postives = 225/466 (48.28%), Query Frame = 0
Query:   17 VFAPKCLCLLSKYPFVEASRTWLLQLYRLSCS-PTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASGVS-LPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASPLILSQSRPPPCL-EPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSK--EDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGG 477
            V  PKCL +LS YP++ A R +L QL RL+ S    +P+ERYI NF  E+P P PG  +VQ ++++ V+    P  + P+ W   L    +FECL   N++  ++ ++LE+QVL+ STQ+S+LT   E   + ++P+ + H +IP+LP   + + + +P+PFL G +  +       L     ++DLD N V      + LP +P  ++A+L   + E+  +   + R L K                                     S++ A  ++ T++ A  +  S+     CL + A HL  + T E + ++ L+   S       R++ +P      ++     +  +  +  WDA+++AFL  F+ +LR +RK+LVFPSK  E       FR  +F+ S   +   FLE+   TQ   +F+  RL    E   +++ FD  ++   +    F+    GG
Sbjct:  164 VHLPKCLVILSTYPYLVAFREFLTQLNRLTKSGEMALPVERYIANFCAEIPAPPPGSFEVQTTIMESVIRMWSPPHNLPIAWVS-LPFSNLFECLDIDNIILGWHCLVLERQVLITSTQISILTTACEIFLSLLFPMRWSHAYIPVLPSFLIPMLS-APMPFLCGINKANLADAMYDLSPECVLIDLDKNTVTLGPETAPLPPIPPVQEAELRAQLEENVGMIFREVRSLTKNDDF---------------------------------SNSGAHLSSHTKMMAEAMWESRL----CLFDEAFHL--AFTPEEARKNHLNGNDSSGLEVSDRDIANPM-----AMLAVTDQQTLRKQSSWDAVQEAFLNTFVYVLRNFRKYLVFPSKHNEGSYGGAGFRSKEFIESQRYDMREFLEQMIGTQMFDNFITKRLYGSGE--PDVAFFDMAVDRFLKNAGLFADVDFGG 581          

HSP 2 Score: 96.6709 bits (239), Expect = 2.033e-16
Identity = 62/218 (28.44%), Postives = 100/218 (45.87%), Query Frame = 0
Query:  968 YNTPSINFQVKYGESLLNVLFPNLALDVDSETCPQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQQQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTASDWIGSTGPGTPLWCEYLSPWVLRKEIQTILLN-DGIDSILSAAFRKSSAASSTIFWNLILWYRDFALPVAFLLQNSVEGAATAPL 1184
            Y T ++  Q+  GE+LL ++FP++++D + E                           +CP C                        N  L   ++ L     D      +    P   +RFV  F V  TA D++GS GPG+PL CE LSPWVL+KEI++++ + +GI+++L   +R     ++ ++WNL+L    +  P +FLLQ S E    AP+
Sbjct: 1140 YVTETVENQIALGENLLEIVFPDISVDTEDE---------------------------TCPRC------------------------NFELSDDAVALGWKPTDSNDYTTA---CPNCTQRFVPHFRVQSTAPDFLGSRGPGSPLMCERLSPWVLQKEIRSVMSDVEGINNLLDPEWRGKEYKNAVLWWNLVLSCMRYRFPFSFLLQGSFEQNLIAPM 1303          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|569439385|gb|ETO36146.1| (hypothetical protein RFI_00920, partial [Reticulomyxa filosa])

HSP 1 Score: 174.481 bits (441), Expect = 9.981e-41
Identity = 90/222 (40.54%), Postives = 136/222 (61.26%), Query Frame = 0
Query:   16 RVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLF 237
            R +APKC+CL+S +PF+EA R +L +LYRLS +P+ +P+ERY+CNF LE P P  G   V+Y + D  L    P  + P++    LS + +FE      LL ++ A+LLE+++LL STQ S+LT VAE L + ++P  +PH FIP+LP   L     +P  FL+G HT S  +  D LPD + +VD++ + +   +   +P LP+    KL R +   ++LF
Sbjct:  410 RYYAPKCICLISYHPFIEAYRIFLTELYRLSLTPSNVPIERYLCNFFLETPLPPRGYFSVRYRIGDKALRIARPPQNNPLI-EQPLSTQLLFELFDLDTLLHIYTAMLLEKKILLLSTQYSILTLVAEMLCSLLYPFDWPHAFIPLLPEDFLAFL-KAPTVFLIGTHT-SLVLALDDLPDDMMIVDINTSSI--KNLPEMPTLPKHELTKLKRYLQPVSDLF 626          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|698798920|ref|XP_009832489.1| (hypothetical protein H257_08352 [Aphanomyces astaci] >gi|574112660|gb|ETV78152.1| hypothetical protein H257_08352 [Aphanomyces astaci])

HSP 1 Score: 164.081 bits (414), Expect = 3.429e-37
Identity = 92/227 (40.53%), Postives = 134/227 (59.03%), Query Frame = 0
Query:   17 VFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASG-----VSLPNLPERRQAKLLRAIHEHANLFE 238
            V++PKC+ +LS+YPF  A RT+L Q+YRLS S   +PLERY+ NF+ E+P P PGRV V+ ++ +  +    P  +Q  L    ++   +F+ L   N+L VF  +LLEQ+V L S  LS+LT +AE L A ++PL +   +IPILP   L +  ++PVPFL+G H+             V  VDLD N++   S       +LP LPER  AKL   + + AN+F+
Sbjct:  283 VYSPKCIVVLSQYPFFSAFRTFLQQIYRLSLSEAPLPLERYVANFVSEIPVPPPGRVQVELTLPEHTMVVSRPPTNQ--LPHADVNFRPLFQMLDLNNVLAVFTCLLLEQKVALCSMHLSVLTPIAESLQALLFPLYWQGAYIPILPSSLLDII-DAPVPFLVGVHSTYLATSNRSSASDVFFVDLDHNRIIAPSNELGQEATLPKLPERETAKLRSKLQDVANVFD 506          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|1173942286|gb|OQR91311.1| (hypothetical protein THRCLA_09040 [Thraustotheca clavata])

HSP 1 Score: 162.54 bits (410), Expect = 6.917e-37
Identity = 151/537 (28.12%), Postives = 236/537 (43.95%), Query Frame = 0
Query:   17 VFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPASG-----VSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPAS---------PLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASHPSEWA-PFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEP--FIYDGFPMLQEKWYTPPRPVNDL 536
            VF PKCL ++S +PF  + R +L Q+YR+S S   +PLERYI N + EVP P  G++ VQ ++ +  LY   P  +Q  L     S   +F+ L   N++ V + +LLEQ+V L S  LSLLT +AE L A ++P A+   +IP+LP   L +  ++PVPFL+G H+  +   A +  D V  +DLD N++          V LP +PER   KL   + E AN+F+     + K       +  + P    ++     P P       S P +  +   +A R   S         P +     P    + A +  AS   +SS +S  S                                   ++ED   IR AFL FF+++L++Y  +L   +      +  F    F+  +   ++ PFL     +Q  Q F + RL  +P  + E+  FD+ I  +           IG  +   SF   +  +     +T VA  P    LPD    + Y  FP L++  +   R   +L
Sbjct:  285 VFCPKCLIVISHHPFFSSFRHFLQQIYRISLSTAPMPLERYISNLVCEVPMPPQGKIQVQLTLPERTLYLARPPKNQMPL--ADFSFRYLFQVLDIANVMTVVSCLLLEQKVALCSKHLSLLTPIAETLIALLFPFAWQGAYIPVLPSSLLDVI-DAPVPFLVGVHS-KYLATASRCND-VYFIDLDHNRIISPRNENEQEVVLPKMPERESTKLRAKLLECANIFDPYSVEISKADLAYPCEEYLEPITDFASSGMTVPIP------GSLPKNRKSSLGSAERKLNSLSQYGNLNFPSLKLLGHPSSASQMAENRSASEYEQSSNDSSFS-------------------------------VNAFSQED---IRLAFLRFFVSLLKKYATYLNCATSTQTPTQPIFDANSFLRDNSDMFSRPFLSIMIESQMFQRFCEDRLY-NP-TLNEVVFFDQAINQKLNRSL-----TIGKKKLDVSF---LEDKSDVIRETFVAPTPSTLGLPDNGTLYHYKSFPRLKKCLFGTIRKPREL 766          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|566014581|gb|ETI37492.1| (hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 162.925 bits (411), Expect = 8.662e-37
Identity = 155/556 (27.88%), Postives = 258/556 (46.40%), Query Frame = 0
Query:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLD--LVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPA-----SGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPT----PSHSALPPAAPPPPLVFSVTSTPSSTTA-------RTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWD--------AIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASH-PSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFI--YDGFPMLQEKWY 527
            +Q  + D+++ P  G VF PKC+ + S YP+  A R +L Q+YR++ S + +P+ERYI NFL+E+P P PG++ VQ ++ D  L++  P P    P++         +F+ L   N+L VF+ V LE +V+L S  + LLT V E L A + P ++   +IP+LP   L +  ++PVPFL+G H+D  + +A +  + V  VDLD N+V PA       + +P LP+R  +KL   + E A++F+     + +       +  + P       H    P +          S  S  +        R++AA  LP S L      PP          AS+T+ S   S L      + H F        + A  +   G   +G +T+  ++         IR AFL FF+ + ++Y  +L    + +      F    F+  +  +   PF+ +   TQ    F++ R+  +P+ + E+  FD+ I  +           IG  +   SF   +  R  +  +T +A  P    LPD+  I  Y  FP L++  +
Sbjct:  342 VQDLSGDVSSAP--GPVFCPKCVVVTSLYPYFSAVRQFLQQIYRVTLSESPMPIERYIANFLVEIPLPPPGQIQVQLTLPDRNLIISRP-PKNELPLV---DFPFRPLFQVLDMNNVLLVFSCVALELKVVLCSKHIGLLTPVGEALLAILLPFSWQGAYIPVLPTSLLDVI-DAPVPFLVGTHSDCLKQIAGRSTNVV-FVDLDHNRVIPAVDDSGKNILVPKLPDREGSKLRAKLAEVASIFDPYAAGISRVDLAFPNEEHLEPIGNFASDHGQTIPLSTSYSESSMSDSLNSHYSIGKIKRGRRSSAAFSLPTSSL------PP----------ASSTAFSRTGSGL------NRHTFS-------ASASMASATGNDASGGLTDSRYNETDNFSAEGIRKAFLRFFVTLFKKYANYLQPAVQGESGTSALFDSKRFLQDNFDAASRPFVAQLIATQMFDRFIEDRIF-NPQ-LSEVLFFDQSINQKLNRS-----LTIGKKKYDCSF---LEDRSDEIQETFIAPPPSNIGLPDDGTIYKYKAFPRLKKNLF 850          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|566014580|gb|ETI37491.1| (hypothetical protein F443_16523 [Phytophthora parasitica P1569])

HSP 1 Score: 162.925 bits (411), Expect = 9.048e-37
Identity = 155/556 (27.88%), Postives = 258/556 (46.40%), Query Frame = 0
Query:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLD--LVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPA-----SGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPT----PSHSALPPAAPPPPLVFSVTSTPSSTTA-------RTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWD--------AIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASH-PSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFI--YDGFPMLQEKWY 527
            +Q  + D+++ P  G VF PKC+ + S YP+  A R +L Q+YR++ S + +P+ERYI NFL+E+P P PG++ VQ ++ D  L++  P P    P++         +F+ L   N+L VF+ V LE +V+L S  + LLT V E L A + P ++   +IP+LP   L +  ++PVPFL+G H+D  + +A +  + V  VDLD N+V PA       + +P LP+R  +KL   + E A++F+     + +       +  + P       H    P +          S  S  +        R++AA  LP S L      PP          AS+T+ S   S L      + H F        + A  +   G   +G +T+  ++         IR AFL FF+ + ++Y  +L    + +      F    F+  +  +   PF+ +   TQ    F++ R+  +P+ + E+  FD+ I  +           IG  +   SF   +  R  +  +T +A  P    LPD+  I  Y  FP L++  +
Sbjct:  342 VQDLSGDVSSAP--GPVFCPKCVVVTSLYPYFSAVRQFLQQIYRVTLSESPMPIERYIANFLVEIPLPPPGQIQVQLTLPDRNLIISRP-PKNELPLV---DFPFRPLFQVLDMNNVLLVFSCVALELKVVLCSKHIGLLTPVGEALLAILLPFSWQGAYIPVLPTSLLDVI-DAPVPFLVGTHSDCLKQIAGRSTNVV-FVDLDHNRVIPAVDDSGKNILVPKLPDREGSKLRAKLAEVASIFDPYAAGISRVDLAFPNEEHLEPIGNFASDHGQTIPLSTSYSESSMSDSLNSHYSIGKIKRGRRSSAAFSLPTSSL------PP----------ASSTAFSRTGSGL------NRHTFS-------ASASMASATGNDASGGLTDSRYNETDNFSAEGIRKAFLRFFVTLFKKYANYLQPAVQGESGTSALFDSKRFLQDNFDAASRPFVAQLIATQMFDRFIEDRIF-NPQ-LSEVLFFDQSINQKLNRS-----LTIGKKKYDCSF---LEDRSDEIQETFIAPPPSNIGLPDDGTIYKYKAFPRLKKNLF 850          
BLAST of EWM30346.1 vs. NCBI_GenBank
Match: gi|568040122|gb|ETM37586.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 162.54 bits (410), Expect = 9.934e-37
Identity = 155/556 (27.88%), Postives = 258/556 (46.40%), Query Frame = 0
Query:    1 MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLD--LVLYYPCPSPHQPVLWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMWPLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVVDLDLNQVYPA-----SGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQLSKEQRRVPPT----PSHSALPPAAPPPPLVFSVTSTPSSTTA-------RTAAATRLPASPLILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDPFSQARRSLQVGAGEAGVMTEEDWD--------AIRDAFLGFFLAILREYRKFLVFPSKEDPKPKLEFRRTDFVASH-PSEWAPFLEEFSRTQALQSFLDARLQPDPEDVGEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLVALQPDVSSLPDEPFI--YDGFPMLQEKWY 527
            +Q  + D+++ P  G VF PKC+ + S YP+  A R +L Q+YR++ S + +P+ERYI NFL+E+P P PG++ VQ ++ D  L++  P P    P++         +F+ L   N+L VF+ V LE +V+L S  + LLT V E L A + P ++   +IP+LP   L +  ++PVPFL+G H+D  + +A +  + V  VDLD N+V PA       + +P LP+R  +KL   + E A++F+     + +       +  + P       H    P +          S  S  +        R++AA  LP S L      PP          AS+T+ S   S L      + H F        + A  +   G   +G +T+  ++         IR AFL FF+ + ++Y  +L    + +      F    F+  +  +   PF+ +   TQ    F++ R+  +P+ + E+  FD+ I  +           IG  +   SF   +  R  +  +T +A  P    LPD+  I  Y  FP L++  +
Sbjct:  342 VQDLSGDVSSAP--GPVFCPKCVVVTSLYPYFSAVRQFLQQIYRVTLSESPMPIERYIANFLVEIPLPPPGQIQVQLTLPDRNLIISRP-PKNELPLV---DFPFRPLFQVLDMNNVLLVFSCVALELKVVLCSKHIGLLTPVGEALLAILLPFSWQGAYIPVLPTSLLDVI-DAPVPFLVGTHSDCLKQIAGRSTNVV-FVDLDHNRVIPAVDDSGKNILVPKLPDREGSKLRAKLAEVASIFDPYAAGISRVDLAFPNEEHLEPIGNFASDHGQTIPLSTSYSESSMSDSLNSHYSIGKIKRGRRSSAAFSLPTSSL------PP----------ASSTAFSRTGSGL------NRHTFS-------ASASMASATGNDASGGLTDSRYNETDNFSTEGIRKAFLRFFVTLFKKYANYLQPAVQGESGTSALFDSKRFLQDNFDAASRPFVAQLIATQMFDRFIEDRIF-NPQ-LSEVLFFDQSINQKLNRS-----LTIGKKKYDCSF---LEDRSDEIQETFIAPPPSNIGLPDDGTIYKYKAFPRLKKNLF 850          
The following BLAST results are available for this feature:
BLAST of EWM30346.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113005|gb|EWM30346.1|0.000e+0100.00dDENN [Nannochloropsis gaditana] >gi|585113006|gb|... [more]
gi|298707247|emb|CBJ25874.1|2.271e-5146.38conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214711692|gb|OWZ22684.1|1.688e-4227.34hypothetical protein PHMEG_0002564 [Phytophthora m... [more]
gi|219113641|ref|XP_002186404.1|7.510e-4128.11predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|569439385|gb|ETO36146.1|9.981e-4140.54hypothetical protein RFI_00920, partial [Reticulom... [more]
gi|698798920|ref|XP_009832489.1|3.429e-3740.53hypothetical protein H257_08352 [Aphanomyces astac... [more]
gi|1173942286|gb|OQR91311.1|6.917e-3728.12hypothetical protein THRCLA_09040 [Thraustotheca c... [more]
gi|566014581|gb|ETI37492.1|8.662e-3727.88hypothetical protein, variant [Phytophthora parasi... [more]
gi|566014580|gb|ETI37491.1|9.048e-3727.88hypothetical protein F443_16523 [Phytophthora para... [more]
gi|568040122|gb|ETM37586.1|9.934e-3727.88hypothetical protein, variant [Phytophthora parasi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna335rna335Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications